RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 APOBEC3GQ9HC16 384 aaKnown RBP14.64□□□□□ -0.07
APOB-202ENST00000399256 PPARGC1AQ9UBK2 798 aaKnown RBP14.64□□□□□ -0.07
APOB-202ENST00000399256 SNCAIPQ9Y6H5 919 aa14.64□□□□□ -0.07
APOB-202ENST00000399256 TGDSO95455 350 aa14.64□□□□□ -0.07
APOB-202ENST00000399256 CDKN2BP42772 138 aa14.64□□□□□ -0.07
APOB-202ENST00000399256 RTP1P59025 263 aa14.64□□□□□ -0.07
APOB-202ENST00000399256 DSG1Q02413 1049 aa14.64□□□□□ -0.07
APOB-202ENST00000399256 GSTA3Q16772 222 aa14.64□□□□□ -0.07
APOB-202ENST00000399256 CNPY1Q3B7I2 92 aa14.64□□□□□ -0.07
APOB-202ENST00000399256 SCUBE1Q8IWY4 988 aa14.64□□□□□ -0.07
APOB-202ENST00000399256 NAT8LQ8N9F0 302 aa14.64□□□□□ -0.07
APOB-202ENST00000399256 B4GALNT2Q8NHY0 566 aa14.64□□□□□ -0.07
APOB-202ENST00000399256 EZH1Q92800 747 aaPredicted RBP14.64□□□□□ -0.07
APOB-202ENST00000399256 APOPT1Q96IL0 206 aa14.64□□□□□ -0.07
APOB-202ENST00000399256 THTPAQ9BU02 230 aa14.64□□□□□ -0.07
APOB-202ENST00000399256 FAM192AQ9GZU8 254 aa14.64□□□□□ -0.07
APOB-202ENST00000399256 IRAK4Q9NWZ3 460 aa14.64□□□□□ -0.07
APOB-202ENST00000399256 TCEAL9Q9UHQ7 104 aa14.64□□□□□ -0.07
APOB-202ENST00000399256 ZNF536O15090 1300 aa14.64□□□□□ -0.07
APOB-202ENST00000399256 PTPRJQ12913 1337 aa14.64□□□□□ -0.07
APOB-202ENST00000399256 TMEM191CA6NGB0 347 aa14.64□□□□□ -0.07
APOB-202ENST00000399256 TMEM191BP0C7N4 346 aa14.64□□□□□ -0.07
APOB-202ENST00000399256 DHRS4L1P0CG22 281 aa14.64□□□□□ -0.07
APOB-202ENST00000399256 RAP1GDS1P52306 607 aa14.64□□□□□ -0.07
APOB-202ENST00000399256 NRLP54845 237 aa14.64□□□□□ -0.07
APOB-202ENST00000399256 OTUD4Q01804 1114 aaKnown RBP14.64□□□□□ -0.07
APOB-202ENST00000399256 MCL1Q07820 350 aa14.64□□□□□ -0.07
APOB-202ENST00000399256 CUL2Q13617 745 aa14.64□□□□□ -0.07
APOB-202ENST00000399256 R3HDM1Q15032 1099 aaKnown RBP14.64□□□□□ -0.07
APOB-202ENST00000399256 DLGAP5Q15398 846 aa14.64□□□□□ -0.07
APOB-202ENST00000399256 SMTNL2Q2TAL5 461 aa14.64□□□□□ -0.07
APOB-202ENST00000399256 ZC3H12AQ5D1E8 599 aaKnown RBP14.64□□□□□ -0.07
APOB-202ENST00000399256 DCUN1D2Q6PH85 259 aa14.64□□□□□ -0.07
APOB-202ENST00000399256 TRIM72Q6ZMU5 477 aa14.64□□□□□ -0.07
APOB-202ENST00000399256 C15orf39Q6ZRI6 1047 aa14.64□□□□□ -0.07
APOB-202ENST00000399256 IGDCC3Q8IVU1 814 aa14.64□□□□□ -0.07
APOB-202ENST00000399256 ACTL9Q8TC94 416 aa14.64□□□□□ -0.07
APOB-202ENST00000399256 FNBP1Q96RU3 617 aa14.64□□□□□ -0.07
APOB-202ENST00000399256 ECSITQ9BQ95 431 aa14.64□□□□□ -0.07
APOB-202ENST00000399256 NDE1Q9NXR1 346 aa14.64□□□□□ -0.07
APOB-202ENST00000399256 FETUBQ9UGM5 382 aa14.64□□□□□ -0.07
APOB-202ENST00000399256 XPO7Q9UIA9 1087 aaKnown RBP14.64□□□□□ -0.07
APOB-202ENST00000399256 ZNRF3Q9ULT6 936 aa14.64□□□□□ -0.07
APOB-202ENST00000399256 AGTPBP1Q9UPW5 1226 aa14.64□□□□□ -0.07
APOB-202ENST00000399256 CCDC195A0A1B0GUA6 201 aa14.63□□□□□ -0.07
APOB-202ENST00000399256 NFIBO00712 420 aa14.63□□□□□ -0.07
APOB-202ENST00000399256 CIB2O75838 187 aa14.63□□□□□ -0.07
APOB-202ENST00000399256 KITP10721 976 aa14.63□□□□□ -0.07
APOB-202ENST00000399256 ETS2P15036 469 aa14.63□□□□□ -0.07
APOB-202ENST00000399256 RPL22P35268 128 aaKnown RBP14.63□□□□□ -0.07
APOB-202ENST00000399256 C1QBPQ07021 282 aaKnown RBP14.63□□□□□ -0.07
APOB-202ENST00000399256 MTMR1Q13613 665 aa14.63□□□□□ -0.07
APOB-202ENST00000399256 ARMC3Q5W041 872 aa14.63□□□□□ -0.07
APOB-202ENST00000399256 ARHGAP22Q7Z5H3 698 aa14.63□□□□□ -0.07
APOB-202ENST00000399256 PCGF5Q86SE9 256 aa14.63□□□□□ -0.07
APOB-202ENST00000399256 CHSY1Q86X52 802 aa14.63□□□□□ -0.07
APOB-202ENST00000399256 VCPIP1Q96JH7 1222 aa14.63□□□□□ -0.07
APOB-202ENST00000399256 NR1H4Q96RI1 486 aaPredicted RBP14.63□□□□□ -0.07
APOB-202ENST00000399256 TMX4Q9H1E5 349 aaPredicted RBP14.63□□□□□ -0.07
APOB-202ENST00000399256 ZNF395Q9H8N7 513 aaPredicted RBP14.63□□□□□ -0.07
APOB-202ENST00000399256 DDX43Q9NXZ2 648 aaKnown RBP14.63□□□□□ -0.07
APOB-202ENST00000399256 MARCOQ9UEW3 520 aaPredicted RBP14.63□□□□□ -0.07
APOB-202ENST00000399256 STRIP2Q9ULQ0 834 aa14.63□□□□□ -0.07
APOB-202ENST00000399256 IKBKGQ9Y6K9 419 aa14.63□□□□□ -0.07
APOB-202ENST00000399256 ACOT2P49753 483 aa14.63□□□□□ -0.07
APOB-202ENST00000399256 BASP1P80723 227 aaKnown RBP14.63□□□□□ -0.07
APOB-202ENST00000399256 TMPRSS6Q8IU80 811 aa14.63□□□□□ -0.07
APOB-202ENST00000399256 ULK2Q8IYT8 1036 aa14.63□□□□□ -0.07
APOB-202ENST00000399256 SLC35B2Q8TB61 432 aa14.63□□□□□ -0.07
APOB-202ENST00000399256 SHKBP1Q8TBC3 707 aa14.63□□□□□ -0.07
APOB-202ENST00000399256 ZWILCHQ9H900 591 aa14.63□□□□□ -0.07
APOB-202ENST00000399256 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.63□□□□□ -0.07
APOB-202ENST00000399256 PPM1HQ9ULR3 514 aa14.63□□□□□ -0.07
APOB-202ENST00000399256 IQANK1A0A1B0GTG1 560 aa14.62□□□□□ -0.07
APOB-202ENST00000399256 MAGEC1O60732 1142 aa14.62□□□□□ -0.07
APOB-202ENST00000399256 FAM155BO75949 473 aa14.62□□□□□ -0.07
APOB-202ENST00000399256 LYPLA2O95372 231 aa14.62□□□□□ -0.07
APOB-202ENST00000399256 VNN1O95497 513 aa14.62□□□□□ -0.07
APOB-202ENST00000399256 DYNC1I2Q13409 638 aaKnown RBP14.62□□□□□ -0.07
APOB-202ENST00000399256 KBTBD12Q3ZCT8 623 aa14.62□□□□□ -0.07
APOB-202ENST00000399256 C1orf146Q5VVC0 180 aa14.62□□□□□ -0.07
APOB-202ENST00000399256 CIAPIN1Q6FI81 312 aa14.62□□□□□ -0.07
APOB-202ENST00000399256 DNAJC24Q6P3W2 148 aa14.62□□□□□ -0.07
APOB-202ENST00000399256 SMC1BQ8NDV3 1235 aa14.62□□□□□ -0.07
APOB-202ENST00000399256 CHURC1Q8WUH1 139 aa14.62□□□□□ -0.07
APOB-202ENST00000399256 RSAD2Q8WXG1 361 aa14.62□□□□□ -0.07
APOB-202ENST00000399256 ELK3P41970 407 aa14.62□□□□□ -0.07
APOB-202ENST00000399256 MRPS9P82933 396 aaKnown RBP14.62□□□□□ -0.07
APOB-202ENST00000399256 CDC16Q13042 620 aa14.62□□□□□ -0.07
APOB-202ENST00000399256 ZACNQ401N2 412 aa14.62□□□□□ -0.07
APOB-202ENST00000399256 HSF5Q4G112 596 aaPredicted RBP14.62□□□□□ -0.07
APOB-202ENST00000399256 CFAP157Q5JU67 520 aa14.62□□□□□ -0.07
APOB-202ENST00000399256 C6orf163Q5TEZ5 329 aa14.62□□□□□ -0.07
APOB-202ENST00000399256 CDHR3Q6ZTQ4 885 aa14.62□□□□□ -0.07
APOB-202ENST00000399256 NET1Q7Z628 596 aaPredicted RBP14.62□□□□□ -0.07
APOB-202ENST00000399256 ARID3BQ8IVW6 561 aaPredicted RBP14.62□□□□□ -0.07
APOB-202ENST00000399256 C4orf19Q8IY42 314 aa14.62□□□□□ -0.07
APOB-202ENST00000399256 SLC7A8Q9UHI5 535 aa14.62□□□□□ -0.07
APOB-202ENST00000399256 CCPG1Q9ULG6 757 aa14.62□□□□□ -0.07
APOB-202ENST00000399256 TMX2Q9Y320 296 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms