RNA–Protein interactions for RNA: ENST00000399127.5

COL25A1-202, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-202ENST00000399127 RBP5P82980 135 aa12.38□□□□□ -0.43
COL25A1-202ENST00000399127 TLK2Q86UE8 772 aa12.38□□□□□ -0.43
COL25A1-202ENST00000399127 ZNF410Q86VK4 478 aa12.38□□□□□ -0.43
COL25A1-202ENST00000399127 DNAJB3Q8WWF6 145 aa12.38□□□□□ -0.43
COL25A1-202ENST00000399127 PIWIL1Q96J94 861 aaKnown RBP12.38□□□□□ -0.43
COL25A1-202ENST00000399127 LPIN3Q9BQK8 851 aa12.38□□□□□ -0.43
COL25A1-202ENST00000399127 NXF3Q9H4D5 531 aaKnown RBP12.38□□□□□ -0.43
COL25A1-202ENST00000399127 C10orf88Q9H8K7 445 aa12.38□□□□□ -0.43
COL25A1-202ENST00000399127 PPANQ9NQ55 473 aaKnown RBP12.38□□□□□ -0.43
COL25A1-202ENST00000399127 ANAPC5Q9UJX4 755 aa12.38□□□□□ -0.43
COL25A1-202ENST00000399127 ITGA11Q9UKX5 1188 aa12.38□□□□□ -0.43
COL25A1-202ENST00000399127 ZNF148Q9UQR1 794 aa12.38□□□□□ -0.43
COL25A1-202ENST00000399127 SNX9Q9Y5X1 595 aa12.38□□□□□ -0.43
COL25A1-202ENST00000399127 SIGLEC16A6NMB1 481 aa12.38□□□□□ -0.43
COL25A1-202ENST00000399127 GPR32O75388 356 aa12.38□□□□□ -0.43
COL25A1-202ENST00000399127 ITIH2P19823 946 aa12.38□□□□□ -0.43
COL25A1-202ENST00000399127 RGS7P49802 495 aa12.38□□□□□ -0.43
COL25A1-202ENST00000399127 PLCB3Q01970 1234 aa12.38□□□□□ -0.43
COL25A1-202ENST00000399127 SLMAPQ14BN4 828 aa12.38□□□□□ -0.43
COL25A1-202ENST00000399127 TAF5Q15542 800 aa12.38□□□□□ -0.43
COL25A1-202ENST00000399127 MDM1Q8TC05 714 aa12.38□□□□□ -0.43
COL25A1-202ENST00000399127 TMEM40Q8WWA1 233 aa12.38□□□□□ -0.43
COL25A1-202ENST00000399127 FAM210AQ96ND0 272 aa12.38□□□□□ -0.43
COL25A1-202ENST00000399127 FAM49BQ9NUQ9 324 aa12.38□□□□□ -0.43
COL25A1-202ENST00000399127 ETAA1Q9NY74 926 aa12.38□□□□□ -0.43
COL25A1-202ENST00000399127 KLK14Q9P0G3 267 aa12.38□□□□□ -0.43
COL25A1-202ENST00000399127 MCM8Q9UJA3 840 aa12.38□□□□□ -0.43
COL25A1-202ENST00000399127 BARX2Q9UMQ3 279 aaPredicted RBP12.38□□□□□ -0.43
COL25A1-202ENST00000399127 C2CD2Q9Y426 696 aa12.38□□□□□ -0.43
COL25A1-202ENST00000399127 A6NJR5 290 aa12.37□□□□□ -0.43
COL25A1-202ENST00000399127 HCRTO43612 131 aa12.37□□□□□ -0.43
COL25A1-202ENST00000399127 LIASO43766 372 aa12.37□□□□□ -0.43
COL25A1-202ENST00000399127 TOMM70O94826 608 aa12.37□□□□□ -0.43
COL25A1-202ENST00000399127 TJP3O95049 919 aa12.37□□□□□ -0.43
COL25A1-202ENST00000399127 CD48P09326 243 aa12.37□□□□□ -0.43
COL25A1-202ENST00000399127 GRM5P41594 1212 aa12.37□□□□□ -0.43
COL25A1-202ENST00000399127 GPD2P43304 727 aa12.37□□□□□ -0.43
COL25A1-202ENST00000399127 PPP2R2AP63151 447 aa12.37□□□□□ -0.43
COL25A1-202ENST00000399127 IFI35P80217 286 aaPredicted RBP12.37□□□□□ -0.43
COL25A1-202ENST00000399127 TAP1Q03518 808 aa12.37□□□□□ -0.43
COL25A1-202ENST00000399127 BYSLQ13895 437 aaKnown RBP12.37□□□□□ -0.43
COL25A1-202ENST00000399127 KYNUQ16719 465 aa12.37□□□□□ -0.43
COL25A1-202ENST00000399127 P3H1Q32P28 736 aa12.37□□□□□ -0.43
COL25A1-202ENST00000399127 RAB6CQ53S08 254 aa12.37□□□□□ -0.43
COL25A1-202ENST00000399127 FAM102AQ5T9C2 384 aaPredicted RBP12.37□□□□□ -0.43
COL25A1-202ENST00000399127 SH3PXD2AQ5TCZ1 1133 aa12.37□□□□□ -0.43
COL25A1-202ENST00000399127 AGBL2Q5U5Z8 902 aa12.37□□□□□ -0.43
COL25A1-202ENST00000399127 RHBDF2Q6PJF5 856 aa12.37□□□□□ -0.43
COL25A1-202ENST00000399127 ACOT1Q86TX2 421 aa12.37□□□□□ -0.43
COL25A1-202ENST00000399127 HOOK3Q86VS8 718 aa12.37□□□□□ -0.43
COL25A1-202ENST00000399127 APBA2Q99767 749 aa12.37□□□□□ -0.43
COL25A1-202ENST00000399127 MRPL45Q9BRJ2 306 aaKnown RBP12.37□□□□□ -0.43
COL25A1-202ENST00000399127 GCOM2Q9BZD3 368 aaPredicted RBP12.37□□□□□ -0.43
COL25A1-202ENST00000399127 TRIM6Q9C030 488 aaPredicted RBP12.37□□□□□ -0.43
COL25A1-202ENST00000399127 RAB6CQ9H0N0 254 aa12.37□□□□□ -0.43
COL25A1-202ENST00000399127 VRTNQ9H8Y1 702 aa12.37□□□□□ -0.43
COL25A1-202ENST00000399127 GJD2Q9UKL4 321 aa12.37□□□□□ -0.43
COL25A1-202ENST00000399127 TSPAN16Q9UKR8 245 aa12.37□□□□□ -0.43
COL25A1-202ENST00000399127 NEU2Q9Y3R4 380 aa12.37□□□□□ -0.43
COL25A1-202ENST00000399127 TRIP12Q14669 1992 aaPredicted RBP12.37□□□□□ -0.43
COL25A1-202ENST00000399127 HTTP42858 3142 aa12.37□□□□□ -0.43
COL25A1-202ENST00000399127 hCG_1818297A0A087WSY0 165 aa12.37□□□□□ -0.43
COL25A1-202ENST00000399127 NDUFAB1O14561 156 aa12.37□□□□□ -0.43
COL25A1-202ENST00000399127 TREHO43280 583 aa12.37□□□□□ -0.43
COL25A1-202ENST00000399127 F2P00734 622 aa12.37□□□□□ -0.43
COL25A1-202ENST00000399127 ZNF865P0CJ78 1059 aaPredicted RBP12.37□□□□□ -0.43
COL25A1-202ENST00000399127 CDKN2BP42772 138 aa12.37□□□□□ -0.43
COL25A1-202ENST00000399127 SLC25A11Q02978 314 aaKnown RBP12.37□□□□□ -0.43
COL25A1-202ENST00000399127 LONRF1Q17RB8 773 aa12.37□□□□□ -0.43
COL25A1-202ENST00000399127 CCDC38Q502W7 563 aa12.37□□□□□ -0.43
COL25A1-202ENST00000399127 TFDP3Q5H9I0 405 aa12.37□□□□□ -0.43
COL25A1-202ENST00000399127 SPDYCQ5MJ68 293 aa12.37□□□□□ -0.43
COL25A1-202ENST00000399127 FAM182AQ5T1J6 154 aa12.37□□□□□ -0.43
COL25A1-202ENST00000399127 IZUMO3Q5VZ72 239 aa12.37□□□□□ -0.43
COL25A1-202ENST00000399127 SLC27A1Q6PCB7 646 aa12.37□□□□□ -0.43
COL25A1-202ENST00000399127 SESTD1Q86VW0 696 aa12.37□□□□□ -0.43
COL25A1-202ENST00000399127 SOCS4Q8WXH5 440 aa12.37□□□□□ -0.43
COL25A1-202ENST00000399127 USP6NLQ92738 828 aa12.37□□□□□ -0.43
COL25A1-202ENST00000399127 CYP3A43Q9HB55 503 aa12.37□□□□□ -0.43
COL25A1-202ENST00000399127 HOMER3Q9NSC5 361 aa12.37□□□□□ -0.43
COL25A1-202ENST00000399127 SLC12A6Q9UHW9 1150 aa12.37□□□□□ -0.43
COL25A1-202ENST00000399127 GNEQ9Y223 722 aaKnown RBP12.37□□□□□ -0.43
COL25A1-202ENST00000399127 RPS6KL1Q9Y6S9 549 aa12.37□□□□□ -0.43
COL25A1-202ENST00000399127 RRN3P2A6NIE6 340 aa12.36□□□□□ -0.43
COL25A1-202ENST00000399127 E5RJQ4 531 aa12.36□□□□□ -0.43
COL25A1-202ENST00000399127 RGS16O15492 202 aaPredicted RBP12.36□□□□□ -0.43
COL25A1-202ENST00000399127 IFNB1P01574 187 aa12.36□□□□□ -0.43
COL25A1-202ENST00000399127 MYL3P08590 195 aa12.36□□□□□ -0.43
COL25A1-202ENST00000399127 VDRP11473 427 aa12.36□□□□□ -0.43
COL25A1-202ENST00000399127 FCGRTP55899 365 aa12.36□□□□□ -0.43
COL25A1-202ENST00000399127 MYO1EQ12965 1108 aa12.36□□□□□ -0.43
COL25A1-202ENST00000399127 MFSD10Q14728 455 aa12.36□□□□□ -0.43
COL25A1-202ENST00000399127 KYAT1Q16773 422 aa12.36□□□□□ -0.43
COL25A1-202ENST00000399127 CDO1Q16878 200 aa12.36□□□□□ -0.43
COL25A1-202ENST00000399127 EMC10Q5UCC4 262 aa12.36□□□□□ -0.43
COL25A1-202ENST00000399127 LRRC38Q5VT99 294 aa12.36□□□□□ -0.43
COL25A1-202ENST00000399127 AP1ARQ63HQ0 302 aa12.36□□□□□ -0.43
COL25A1-202ENST00000399127 TAB3Q8N5C8 712 aaPredicted RBP12.36□□□□□ -0.43
COL25A1-202ENST00000399127 NIPA2Q8N8Q9 360 aa12.36□□□□□ -0.43
COL25A1-202ENST00000399127 HSPH1Q92598 858 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms