RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 RHOBTB3O94955 611 aa14.33□□□□□ -0.12
VCX3A-202ENST00000398729 ZNF202O95125 648 aa14.33□□□□□ -0.12
VCX3A-202ENST00000398729 STAU1O95793 577 aaKnown RBP14.33□□□□□ -0.12
VCX3A-202ENST00000398729 F11P03951 625 aa14.33□□□□□ -0.12
VCX3A-202ENST00000398729 NR3C1P04150 777 aa14.33□□□□□ -0.12
VCX3A-202ENST00000398729 PDGFRBP09619 1106 aa14.33□□□□□ -0.12
VCX3A-202ENST00000398729 PRR29P0C7W0 189 aa14.33□□□□□ -0.12
VCX3A-202ENST00000398729 ATICP31939 592 aa14.33□□□□□ -0.12
VCX3A-202ENST00000398729 GNL1P36915 607 aaPredicted RBP14.33□□□□□ -0.12
VCX3A-202ENST00000398729 AVPR1AP37288 418 aa14.33□□□□□ -0.12
VCX3A-202ENST00000398729 MAGEA11P43364 429 aa14.33□□□□□ -0.12
VCX3A-202ENST00000398729 RPS9P46781 194 aaKnown RBP14.33□□□□□ -0.12
VCX3A-202ENST00000398729 CASP4P49662 377 aa14.33□□□□□ -0.12
VCX3A-202ENST00000398729 MLLT6P55198 1093 aaPredicted RBP14.33□□□□□ -0.12
VCX3A-202ENST00000398729 MYL6P60660 151 aa14.33□□□□□ -0.12
VCX3A-202ENST00000398729 BIRC3Q13489 604 aa14.33□□□□□ -0.12
VCX3A-202ENST00000398729 CCDC142Q17RM4 750 aa14.33□□□□□ -0.12
VCX3A-202ENST00000398729 ARHGAP29Q52LW3 1261 aa14.33□□□□□ -0.12
VCX3A-202ENST00000398729 CMTM8Q8IZV2 173 aa14.33□□□□□ -0.12
VCX3A-202ENST00000398729 CELF5Q8N6W0 485 aaKnown RBP14.33□□□□□ -0.12
VCX3A-202ENST00000398729 MAB21L3Q8N8X9 362 aa14.33□□□□□ -0.12
VCX3A-202ENST00000398729 STKLD1Q8NE28 680 aa14.33□□□□□ -0.12
VCX3A-202ENST00000398729 OR6B3Q8NGW1 331 aa14.33□□□□□ -0.12
VCX3A-202ENST00000398729 BPIFB1Q8TDL5 484 aa14.33□□□□□ -0.12
VCX3A-202ENST00000398729 PARD3BQ8TEW8 1205 aa14.33□□□□□ -0.12
VCX3A-202ENST00000398729 FAM3CQ92520 227 aa14.33□□□□□ -0.12
VCX3A-202ENST00000398729 MRPS31Q92665 395 aaKnown RBP14.33□□□□□ -0.12
VCX3A-202ENST00000398729 MYLPFQ96A32 169 aa14.33□□□□□ -0.12
VCX3A-202ENST00000398729 TRMT2BQ96GJ1 504 aaKnown RBP14.33□□□□□ -0.12
VCX3A-202ENST00000398729 MSANTD3Q96H12 275 aa14.33□□□□□ -0.12
VCX3A-202ENST00000398729 MRPL45Q9BRJ2 306 aaKnown RBP14.33□□□□□ -0.12
VCX3A-202ENST00000398729 SLC46A2Q9BY10 475 aa14.33□□□□□ -0.12
VCX3A-202ENST00000398729 GZF1Q9H116 711 aaPredicted RBP14.33□□□□□ -0.12
VCX3A-202ENST00000398729 GDPD2Q9HCC8 539 aa14.33□□□□□ -0.12
VCX3A-202ENST00000398729 MAGEC2Q9UBF1 373 aaPredicted RBP14.33□□□□□ -0.12
VCX3A-202ENST00000398729 NDRG2Q9UN36 371 aaKnown RBP14.33□□□□□ -0.12
VCX3A-202ENST00000398729 SMG5Q9UPR3 1016 aaKnown RBP14.33□□□□□ -0.12
VCX3A-202ENST00000398729 PATJQ8NI35 1801 aa14.33□□□□□ -0.12
VCX3A-202ENST00000398729 LRRIQ3A6PVS8 624 aaPredicted RBP14.32□□□□□ -0.12
VCX3A-202ENST00000398729 PRR5-ARHGAP8B1AHC4 643 aa14.32□□□□□ -0.12
VCX3A-202ENST00000398729 NOL4O94818 638 aa14.32□□□□□ -0.12
VCX3A-202ENST00000398729 CLSTN1O94985 981 aa14.32□□□□□ -0.12
VCX3A-202ENST00000398729 PRAMEF12O95522 483 aa14.32□□□□□ -0.12
VCX3A-202ENST00000398729 TDGF1P13385 188 aa14.32□□□□□ -0.12
VCX3A-202ENST00000398729 SDHBP21912 280 aa14.32□□□□□ -0.12
VCX3A-202ENST00000398729 KPNA1P52294 538 aaPredicted RBP14.32□□□□□ -0.12
VCX3A-202ENST00000398729 CLDN10P78369 228 aa14.32□□□□□ -0.12
VCX3A-202ENST00000398729 NUCB2P80303 420 aa14.32□□□□□ -0.12
VCX3A-202ENST00000398729 ARHGAP8P85298 464 aa14.32□□□□□ -0.12
VCX3A-202ENST00000398729 PLCB2Q00722 1185 aa14.32□□□□□ -0.12
VCX3A-202ENST00000398729 CYP27A1Q02318 531 aa14.32□□□□□ -0.12
VCX3A-202ENST00000398729 DPYDQ12882 1025 aa14.32□□□□□ -0.12
VCX3A-202ENST00000398729 MTAPQ13126 283 aa14.32□□□□□ -0.12
VCX3A-202ENST00000398729 TDRD10Q5VZ19 366 aaKnown RBP14.32□□□□□ -0.12
VCX3A-202ENST00000398729 CEP135Q66GS9 1140 aa14.32□□□□□ -0.12
VCX3A-202ENST00000398729 C1orf228Q6PIY5 440 aa14.32□□□□□ -0.12
VCX3A-202ENST00000398729 VSTM1Q6UX27 236 aa14.32□□□□□ -0.12
VCX3A-202ENST00000398729 TMEM150AQ86TG1 271 aa14.32□□□□□ -0.12
VCX3A-202ENST00000398729 MYCBPAPQ8TBZ2 947 aa14.32□□□□□ -0.12
VCX3A-202ENST00000398729 PLEKHO2Q8TD55 490 aa14.32□□□□□ -0.12
VCX3A-202ENST00000398729 MYRFLQ96LU7 910 aa14.32□□□□□ -0.12
VCX3A-202ENST00000398729 LRRC3BQ96PB8 259 aa14.32□□□□□ -0.12
VCX3A-202ENST00000398729 GOLPH3LQ9H4A5 285 aa14.32□□□□□ -0.12
VCX3A-202ENST00000398729 C8orf33Q9H7E9 229 aaPredicted RBP14.32□□□□□ -0.12
VCX3A-202ENST00000398729 CRTAC1Q9NQ79 661 aa14.32□□□□□ -0.12
VCX3A-202ENST00000398729 THG1LQ9NWX6 298 aaKnown RBP14.32□□□□□ -0.12
VCX3A-202ENST00000398729 NXF1Q9UBU9 619 aaKnown RBP14.32□□□□□ -0.12
VCX3A-202ENST00000398729 FRMD4BQ9Y2L6 1034 aa14.32□□□□□ -0.12
VCX3A-202ENST00000398729 OBSL1O75147 1896 aa14.31□□□□□ -0.12
VCX3A-202ENST00000398729 ZNF638Q14966 1978 aaKnown RBP14.31□□□□□ -0.12
VCX3A-202ENST00000398729 BDNFP23560 247 aa14.31□□□□□ -0.12
VCX3A-202ENST00000398729 CCNE1P24864 410 aa14.31□□□□□ -0.12
VCX3A-202ENST00000398729 ANXA13P27216 316 aa14.31□□□□□ -0.12
VCX3A-202ENST00000398729 GRIK1P39086 918 aa14.31□□□□□ -0.12
VCX3A-202ENST00000398729 NCOA4Q13772 614 aa14.31□□□□□ -0.12
VCX3A-202ENST00000398729 KCNB1Q14721 858 aa14.31□□□□□ -0.12
VCX3A-202ENST00000398729 ZNF699Q32M78 642 aa14.31□□□□□ -0.12
VCX3A-202ENST00000398729 TXNDC8Q6A555 127 aa14.31□□□□□ -0.12
VCX3A-202ENST00000398729 TMC2Q8TDI7 906 aa14.31□□□□□ -0.12
VCX3A-202ENST00000398729 PCED1BQ96HM7 432 aa14.31□□□□□ -0.12
VCX3A-202ENST00000398729 ZFYVE19Q96K21 471 aa14.31□□□□□ -0.12
VCX3A-202ENST00000398729 CEP295NLQ96MC4 621 aa14.31□□□□□ -0.12
VCX3A-202ENST00000398729 SMG9Q9H0W8 520 aaKnown RBP14.31□□□□□ -0.12
VCX3A-202ENST00000398729 XYLT2Q9H1B5 865 aa14.31□□□□□ -0.12
VCX3A-202ENST00000398729 VRTNQ9H8Y1 702 aa14.31□□□□□ -0.12
VCX3A-202ENST00000398729 KIF9Q9HAQ2 790 aa14.31□□□□□ -0.12
VCX3A-202ENST00000398729 PRMT8Q9NR22 394 aaPredicted RBP14.31□□□□□ -0.12
VCX3A-202ENST00000398729 TRAF3IP3Q9Y228 551 aa14.31□□□□□ -0.12
VCX3A-202ENST00000398729 SDK1Q7Z5N4 2213 aa14.31□□□□□ -0.12
VCX3A-202ENST00000398729 GOLGA6L4A6NEF3 574 aa14.3□□□□□ -0.12
VCX3A-202ENST00000398729 A8MXQ7 604 aa14.3□□□□□ -0.12
VCX3A-202ENST00000398729 TRIM66O15016 1216 aa14.3□□□□□ -0.12
VCX3A-202ENST00000398729 TADA3O75528 432 aa14.3□□□□□ -0.12
VCX3A-202ENST00000398729 C4BPAP04003 597 aaKnown RBP14.3□□□□□ -0.12
VCX3A-202ENST00000398729 PTPN1P18031 435 aaKnown RBP14.3□□□□□ -0.12
VCX3A-202ENST00000398729 ZNF667Q5HYK9 610 aa14.3□□□□□ -0.12
VCX3A-202ENST00000398729 MDH1BQ5I0G3 518 aa14.3□□□□□ -0.12
VCX3A-202ENST00000398729 MON1AQ86VX9 555 aa14.3□□□□□ -0.12
VCX3A-202ENST00000398729 RALGPS2Q86X27 583 aaPredicted RBP14.3□□□□□ -0.12
VCX3A-202ENST00000398729 SPATA17Q96L03 361 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms