RNA–Protein interactions for RNA: ENST00000397954.6

UBE3A-202, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 2,873 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-202ENST00000397954 VN1R2Q8NFZ6 395 aa4.08□□□□□ -1.76
UBE3A-202ENST00000397954 DNAJB3Q8WWF6 145 aa4.08□□□□□ -1.76
UBE3A-202ENST00000397954 RAD54LQ92698 747 aa4.08□□□□□ -1.76
UBE3A-202ENST00000397954 ACSF2Q96CM8 615 aaPredicted RBP4.08□□□□□ -1.76
UBE3A-202ENST00000397954 HSPBAP1Q96EW2 488 aa4.08□□□□□ -1.76
UBE3A-202ENST00000397954 WDR89Q96FK6 387 aaPredicted RBP4.08□□□□□ -1.76
UBE3A-202ENST00000397954 MPP4Q96JB8 637 aa4.08□□□□□ -1.76
UBE3A-202ENST00000397954 CCDC94Q9BW85 323 aaPredicted RBP4.08□□□□□ -1.76
UBE3A-202ENST00000397954 GPR88Q9GZN0 384 aa4.08□□□□□ -1.76
UBE3A-202ENST00000397954 CPVLQ9H3G5 476 aa4.08□□□□□ -1.76
UBE3A-202ENST00000397954 FAM105AQ9NUU6 356 aa4.08□□□□□ -1.76
UBE3A-202ENST00000397954 SAMD15Q9P1V8 674 aa4.08□□□□□ -1.76
UBE3A-202ENST00000397954 PNMA8BQ9ULN7 279 aaPredicted RBP4.08□□□□□ -1.76
UBE3A-202ENST00000397954 ST3GAL5Q9UNP4 418 aa4.08□□□□□ -1.76
UBE3A-202ENST00000397954 SPEF1Q9Y4P9 236 aa4.08□□□□□ -1.76
UBE3A-202ENST00000397954 BTBD18B2RXH4 712 aa4.08□□□□□ -1.76
UBE3A-202ENST00000397954 PRRT4C9JH25 899 aa4.08□□□□□ -1.76
UBE3A-202ENST00000397954 TPP1O14773 563 aa4.08□□□□□ -1.76
UBE3A-202ENST00000397954 AP1G1O43747 822 aa4.08□□□□□ -1.76
UBE3A-202ENST00000397954 PEX10O60683 326 aa4.08□□□□□ -1.76
UBE3A-202ENST00000397954 SETSIPP0DME0 302 aa4.08□□□□□ -1.76
UBE3A-202ENST00000397954 ITGA4P13612 1032 aa4.08□□□□□ -1.76
UBE3A-202ENST00000397954 RXRAP19793 462 aa4.08□□□□□ -1.76
UBE3A-202ENST00000397954 DDX6P26196 483 aaKnown RBP eCLIP4.08□□□□□ -1.76
UBE3A-202ENST00000397954 CCT6AP40227 531 aaKnown RBP4.08□□□□□ -1.76
UBE3A-202ENST00000397954 UBA7P41226 1012 aa4.08□□□□□ -1.76
UBE3A-202ENST00000397954 RECQLP46063 649 aaPredicted RBP4.08□□□□□ -1.76
UBE3A-202ENST00000397954 SLC12A3P55017 1021 aa4.08□□□□□ -1.76
UBE3A-202ENST00000397954 MBTPS1Q14703 1052 aa4.08□□□□□ -1.76
UBE3A-202ENST00000397954 KCNB1Q14721 858 aa4.08□□□□□ -1.76
UBE3A-202ENST00000397954 DUSP6Q16828 381 aa4.08□□□□□ -1.76
UBE3A-202ENST00000397954 NOMO2Q5JPE7 1267 aa4.08□□□□□ -1.76
UBE3A-202ENST00000397954 C6orf118Q5T5N4 469 aa4.08□□□□□ -1.76
UBE3A-202ENST00000397954 NCAPH2Q6IBW4 605 aa4.08□□□□□ -1.76
UBE3A-202ENST00000397954 MPZL3Q6UWV2 235 aa4.08□□□□□ -1.76
UBE3A-202ENST00000397954 C1orf186Q6ZWK4 172 aa4.08□□□□□ -1.76
UBE3A-202ENST00000397954 BMP8AQ7Z5Y6 402 aa4.08□□□□□ -1.76
UBE3A-202ENST00000397954 ADAT2Q7Z6V5 191 aaKnown RBP4.08□□□□□ -1.76
UBE3A-202ENST00000397954 C12orf40Q86WS4 652 aa4.08□□□□□ -1.76
UBE3A-202ENST00000397954 MAP4K3Q8IVH8 894 aa4.08□□□□□ -1.76
UBE3A-202ENST00000397954 CCDC65Q8IXS2 484 aa4.08□□□□□ -1.76
UBE3A-202ENST00000397954 FAM186BQ8IYM0 893 aa4.08□□□□□ -1.76
UBE3A-202ENST00000397954 SLC39A11Q8N1S5 342 aa4.08□□□□□ -1.76
UBE3A-202ENST00000397954 DEFB123Q8N688 67 aa4.08□□□□□ -1.76
UBE3A-202ENST00000397954 IQUBQ8NA54 791 aa4.08□□□□□ -1.76
UBE3A-202ENST00000397954 DBF4BQ8NFT6 615 aa4.08□□□□□ -1.76
UBE3A-202ENST00000397954 MAFAQ8NHW3 353 aaPredicted RBP4.08□□□□□ -1.76
UBE3A-202ENST00000397954 DEPTORQ8TB45 409 aa4.08□□□□□ -1.76
UBE3A-202ENST00000397954 STAMQ92783 540 aa4.08□□□□□ -1.76
UBE3A-202ENST00000397954 SKA1Q96BD8 255 aa4.08□□□□□ -1.76
UBE3A-202ENST00000397954 AHCYL2Q96HN2 611 aaKnown RBP4.08□□□□□ -1.76
UBE3A-202ENST00000397954 TNIP3Q96KP6 325 aa4.08□□□□□ -1.76
UBE3A-202ENST00000397954 RIPOR3Q96MK2 946 aa4.08□□□□□ -1.76
UBE3A-202ENST00000397954 GUCD1Q96NT3 240 aa4.08□□□□□ -1.76
UBE3A-202ENST00000397954 CASD1Q96PB1 797 aa4.08□□□□□ -1.76
UBE3A-202ENST00000397954 TAAR9Q96RI9 348 aa4.08□□□□□ -1.76
UBE3A-202ENST00000397954 C7orf25Q9BPX7 421 aa4.08□□□□□ -1.76
UBE3A-202ENST00000397954 CRB3Q9BUF7 120 aa4.08□□□□□ -1.76
UBE3A-202ENST00000397954 C1QTNF1Q9BXJ1 281 aa4.08□□□□□ -1.76
UBE3A-202ENST00000397954 KLHL25Q9H0H3 589 aa4.08□□□□□ -1.76
UBE3A-202ENST00000397954 MS4A5Q9H3V2 200 aa4.08□□□□□ -1.76
UBE3A-202ENST00000397954 SFXN1Q9H9B4 322 aa4.08□□□□□ -1.76
UBE3A-202ENST00000397954 PARVGQ9HBI0 331 aa4.08□□□□□ -1.76
UBE3A-202ENST00000397954 ASB3Q9Y575 518 aa4.08□□□□□ -1.76
UBE3A-202ENST00000397954 MTCH2Q9Y6C9 303 aa4.08□□□□□ -1.76
UBE3A-202ENST00000397954 DGKBQ9Y6T7 804 aa4.08□□□□□ -1.76
UBE3A-202ENST00000397954 SF3B1O75533 1304 aaKnown RBP eCLIP4.08□□□□□ -1.766e-7■■■■■ 109.6
UBE3A-202ENST00000397954 COL4A2P08572 1712 aa4.08□□□□□ -1.76
UBE3A-202ENST00000397954 PLXNA3P51805 1871 aa4.08□□□□□ -1.76
UBE3A-202ENST00000397954 PTPRDP23468 1912 aa4.08□□□□□ -1.76
UBE3A-202ENST00000397954 FIGNL2A6NMB9 653 aa4.08□□□□□ -1.76
UBE3A-202ENST00000397954 TSPAN1O60635 241 aa4.08□□□□□ -1.76
UBE3A-202ENST00000397954 TBCAO75347 108 aaKnown RBP4.08□□□□□ -1.76
UBE3A-202ENST00000397954 TOM1L1O75674 476 aa4.08□□□□□ -1.76
UBE3A-202ENST00000397954 IL33O95760 270 aa4.08□□□□□ -1.76
UBE3A-202ENST00000397954 CLTAP09496 248 aa4.08□□□□□ -1.76
UBE3A-202ENST00000397954 ZSCAN22P10073 491 aaPredicted RBP4.08□□□□□ -1.76
UBE3A-202ENST00000397954 CTSAP10619 480 aa4.08□□□□□ -1.76
UBE3A-202ENST00000397954 GTF2H1P32780 548 aa4.08□□□□□ -1.76
UBE3A-202ENST00000397954 DDIT3P35638 169 aa4.08□□□□□ -1.76
UBE3A-202ENST00000397954 PPP3CCP48454 512 aa4.08□□□□□ -1.76
UBE3A-202ENST00000397954 GABREP78334 506 aa4.08□□□□□ -1.76
UBE3A-202ENST00000397954 KRT85P78386 507 aa4.08□□□□□ -1.76
UBE3A-202ENST00000397954 KLF1Q13351 362 aaPredicted RBP4.08□□□□□ -1.76
UBE3A-202ENST00000397954 TUSC3Q13454 348 aa4.08□□□□□ -1.76
UBE3A-202ENST00000397954 BIRC3Q13489 604 aa4.08□□□□□ -1.76
UBE3A-202ENST00000397954 CCDC149Q6ZUS6 474 aa4.08□□□□□ -1.76
UBE3A-202ENST00000397954 CATSPER4Q7RTX7 472 aa4.08□□□□□ -1.76
UBE3A-202ENST00000397954 CABP7Q86V35 215 aa4.08□□□□□ -1.76
UBE3A-202ENST00000397954 CATSPER3Q86XQ3 398 aa4.08□□□□□ -1.76
UBE3A-202ENST00000397954 UBALD2Q8IYN6 164 aa4.08□□□□□ -1.76
UBE3A-202ENST00000397954 TRIML1Q8N9V2 468 aa4.08□□□□□ -1.76
UBE3A-202ENST00000397954 CCDC26Q8TAB7 109 aa4.08□□□□□ -1.76
UBE3A-202ENST00000397954 CACTINQ8WUQ7 758 aaKnown RBP4.08□□□□□ -1.76
UBE3A-202ENST00000397954 LARP4BQ92615 738 aaKnown RBP4.08□□□□□ -1.76
UBE3A-202ENST00000397954 LENG1Q96BZ8 264 aaPredicted RBP4.08□□□□□ -1.76
UBE3A-202ENST00000397954 DYDC2Q96IM9 177 aa4.08□□□□□ -1.76
UBE3A-202ENST00000397954 ZNF560Q96MR9 790 aa4.08□□□□□ -1.76
UBE3A-202ENST00000397954 CDX2Q99626 313 aaPredicted RBP4.08□□□□□ -1.76
UBE3A-202ENST00000397954 STRA6Q9BX79 667 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms