RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 ST6GALNAC4Q9H4F1 302 aa17.31■□□□□ 0.36
CUX2-202ENST00000397643 TRPC7Q9HCX4 862 aa17.31■□□□□ 0.36
CUX2-202ENST00000397643 UXTQ9UBK9 157 aaPredicted RBP17.31■□□□□ 0.36
CUX2-202ENST00000397643 AGO2Q9UKV8 859 aaKnown RBP17.31■□□□□ 0.36
CUX2-202ENST00000397643 DMXL2Q8TDJ6 3036 aa17.31■□□□□ 0.36
CUX2-202ENST00000397643 TNRC6BQ9UPQ9 1833 aaKnown RBP17.31■□□□□ 0.36
CUX2-202ENST00000397643 TRAV19A0A0A6YYK7 116 aa17.3■□□□□ 0.36
CUX2-202ENST00000397643 VPS37CA5D8V6 355 aaPredicted RBP17.3■□□□□ 0.36
CUX2-202ENST00000397643 K7EQS6 105 aa17.3■□□□□ 0.36
CUX2-202ENST00000397643 KHNYNO15037 678 aaKnown RBP17.3■□□□□ 0.36
CUX2-202ENST00000397643 CKMP06732 381 aa17.3■□□□□ 0.36
CUX2-202ENST00000397643 USP17L7P0C7H9 530 aa17.3■□□□□ 0.36
CUX2-202ENST00000397643 HNRNPLP14866 589 aaKnown RBP eCLIP17.3■□□□□ 0.36
CUX2-202ENST00000397643 TCF3P15923 654 aa17.3■□□□□ 0.36
CUX2-202ENST00000397643 ACAT1P24752 427 aaKnown RBP17.3■□□□□ 0.36
CUX2-202ENST00000397643 IRX4P78413 519 aa17.3■□□□□ 0.36
CUX2-202ENST00000397643 ZXDBP98169 803 aa17.3■□□□□ 0.36
CUX2-202ENST00000397643 PSMD2Q13200 908 aa17.3■□□□□ 0.36
CUX2-202ENST00000397643 MCM6Q14566 821 aa17.3■□□□□ 0.36
CUX2-202ENST00000397643 INTS6LQ5JSJ4 861 aaKnown RBP17.3■□□□□ 0.36
CUX2-202ENST00000397643 ANO7Q6IWH7 933 aa17.3■□□□□ 0.36
CUX2-202ENST00000397643 C11orf74Q86VG3 221 aa17.3■□□□□ 0.36
CUX2-202ENST00000397643 OSTM1Q86WC4 334 aa17.3■□□□□ 0.36
CUX2-202ENST00000397643 ARL14EPQ8N8R7 260 aaPredicted RBP17.3■□□□□ 0.36
CUX2-202ENST00000397643 MDGA1Q8NFP4 955 aa17.3■□□□□ 0.36
CUX2-202ENST00000397643 SH3RF2Q8TEC5 729 aa17.3■□□□□ 0.36
CUX2-202ENST00000397643 AK8Q96MA6 479 aa17.3■□□□□ 0.36
CUX2-202ENST00000397643 ZNF560Q96MR9 790 aa17.3■□□□□ 0.36
CUX2-202ENST00000397643 ACBD6Q9BR61 282 aa17.3■□□□□ 0.36
CUX2-202ENST00000397643 SCNM1Q9BWG6 230 aa17.3■□□□□ 0.36
CUX2-202ENST00000397643 LINC00597Q9H2U6 94 aa17.3■□□□□ 0.36
CUX2-202ENST00000397643 DSPP15924 2871 aaKnown RBP17.29■□□□□ 0.36
CUX2-202ENST00000397643 C2orf78A6NCI8 922 aa17.29■□□□□ 0.36
CUX2-202ENST00000397643 TMEM8BA6NDV4 472 aa17.29■□□□□ 0.36
CUX2-202ENST00000397643 HCRTO43612 131 aa17.29■□□□□ 0.36
CUX2-202ENST00000397643 STX6O43752 255 aa17.29■□□□□ 0.36
CUX2-202ENST00000397643 PLCG1P19174 1290 aa17.29■□□□□ 0.36
CUX2-202ENST00000397643 POLR2BP30876 1174 aaKnown RBP17.29■□□□□ 0.36
CUX2-202ENST00000397643 RPL10AP62906 217 aaKnown RBP17.29■□□□□ 0.36
CUX2-202ENST00000397643 CFAP221Q4G0U5 840 aa17.29■□□□□ 0.36
CUX2-202ENST00000397643 USP39Q53GS9 565 aaKnown RBP17.29■□□□□ 0.36
CUX2-202ENST00000397643 MCTP1Q6DN14 999 aa17.29■□□□□ 0.36
CUX2-202ENST00000397643 SLFN12LQ6IEE8 588 aa17.29■□□□□ 0.36
CUX2-202ENST00000397643 CYP2U1Q7Z449 544 aa17.29■□□□□ 0.36
CUX2-202ENST00000397643 NT5DC4Q86YG4 428 aa17.29■□□□□ 0.36
CUX2-202ENST00000397643 C1orf127Q8N9H9 656 aa17.29■□□□□ 0.36
CUX2-202ENST00000397643 TTC16Q8NEE8 873 aa17.29■□□□□ 0.36
CUX2-202ENST00000397643 OLIG1Q8TAK6 271 aa17.29■□□□□ 0.36
CUX2-202ENST00000397643 RAD54LQ92698 747 aa17.29■□□□□ 0.36
CUX2-202ENST00000397643 FAM84AQ96KN4 292 aa17.29■□□□□ 0.36
CUX2-202ENST00000397643 ZHX3Q9H4I2 956 aa17.29■□□□□ 0.36
CUX2-202ENST00000397643 DDX43Q9NXZ2 648 aaKnown RBP17.29■□□□□ 0.36
CUX2-202ENST00000397643 MMP17Q9ULZ9 603 aa17.29■□□□□ 0.36
CUX2-202ENST00000397643 ARHGAP26Q9UNA1 814 aa17.29■□□□□ 0.36
CUX2-202ENST00000397643 GON4LQ3T8J9 2241 aa17.29■□□□□ 0.36
CUX2-202ENST00000397643 ANKRD11Q6UB99 2663 aaPredicted RBP17.29■□□□□ 0.36
CUX2-202ENST00000397643 PCNX2A6NKB5 2137 aa17.28■□□□□ 0.36
CUX2-202ENST00000397643 TBCAO75347 108 aaKnown RBP17.28■□□□□ 0.36
CUX2-202ENST00000397643 PPP1R37O75864 691 aa17.28■□□□□ 0.36
CUX2-202ENST00000397643 IL18RAPO95256 599 aa17.28■□□□□ 0.36
CUX2-202ENST00000397643 ABCD1P33897 745 aa17.28■□□□□ 0.36
CUX2-202ENST00000397643 PNPLA4P41247 253 aa17.28■□□□□ 0.36
CUX2-202ENST00000397643 SEC13P55735 322 aa17.28■□□□□ 0.36
CUX2-202ENST00000397643 GRIN1Q05586 938 aa17.28■□□□□ 0.36
CUX2-202ENST00000397643 C2orf27AQ580R0 203 aa17.28■□□□□ 0.36
CUX2-202ENST00000397643 ZSWIM2Q8NEG5 633 aa17.28■□□□□ 0.36
CUX2-202ENST00000397643 DEFB124Q8NES8 71 aa17.28■□□□□ 0.36
CUX2-202ENST00000397643 EVLQ9UI08 416 aaPredicted RBP17.28■□□□□ 0.36
CUX2-202ENST00000397643 GTF3C4Q9UKN8 822 aa17.28■□□□□ 0.36
CUX2-202ENST00000397643 LAMA5O15230 3695 aa17.28■□□□□ 0.36
CUX2-202ENST00000397643 SRRM3A6NNA2 597 aaPredicted RBP17.27■□□□□ 0.36
CUX2-202ENST00000397643 ITGB3P05106 788 aa17.27■□□□□ 0.36
CUX2-202ENST00000397643 MESP2Q0VG99 397 aa17.27■□□□□ 0.36
CUX2-202ENST00000397643 CRY1Q16526 586 aa17.27■□□□□ 0.36
CUX2-202ENST00000397643 TMEM92Q6UXU6 159 aa17.27■□□□□ 0.36
CUX2-202ENST00000397643 SFTPA1Q8IWL2 248 aa17.27■□□□□ 0.36
CUX2-202ENST00000397643 BRSK2Q8IWQ3 736 aa17.27■□□□□ 0.36
CUX2-202ENST00000397643 TMEM86AQ8N2M4 240 aa17.27■□□□□ 0.36
CUX2-202ENST00000397643 CCDC26Q8TAB7 109 aa17.27■□□□□ 0.36
CUX2-202ENST00000397643 POMGNT1Q8WZA1 660 aa17.27■□□□□ 0.36
CUX2-202ENST00000397643 CALML4Q96GE6 196 aa17.27■□□□□ 0.36
CUX2-202ENST00000397643 FNBP1Q96RU3 617 aa17.27■□□□□ 0.36
CUX2-202ENST00000397643 STRA6Q9BX79 667 aa17.27■□□□□ 0.36
CUX2-202ENST00000397643 AGAP1Q9UPQ3 857 aa17.27■□□□□ 0.36
CUX2-202ENST00000397643 MTMR6Q9Y217 621 aa17.27■□□□□ 0.36
CUX2-202ENST00000397643 PI4KAP42356 2102 aa17.26■□□□□ 0.35
CUX2-202ENST00000397643 PLXND1Q9Y4D7 1925 aa17.26■□□□□ 0.35
CUX2-202ENST00000397643 GABRDO14764 452 aa17.26■□□□□ 0.35
CUX2-202ENST00000397643 NFATC1O95644 943 aa17.26■□□□□ 0.35
CUX2-202ENST00000397643 CYP17A1P05093 508 aa17.26■□□□□ 0.35
CUX2-202ENST00000397643 KRT18P05783 430 aaKnown RBP17.26■□□□□ 0.35
CUX2-202ENST00000397643 UBA7P41226 1012 aa17.26■□□□□ 0.35
CUX2-202ENST00000397643 DHPSP49366 369 aaPredicted RBP17.26■□□□□ 0.35
CUX2-202ENST00000397643 TFAMQ00059 246 aaKnown RBP17.26■□□□□ 0.35
CUX2-202ENST00000397643 MYL7Q01449 175 aa17.26■□□□□ 0.35
CUX2-202ENST00000397643 KCNA1Q09470 495 aa17.26■□□□□ 0.35
CUX2-202ENST00000397643 NR1H3Q13133 447 aa17.26■□□□□ 0.35
CUX2-202ENST00000397643 KCNB1Q14721 858 aa17.26■□□□□ 0.35
CUX2-202ENST00000397643 KIAA1211LQ6NV74 962 aa17.26■□□□□ 0.35
CUX2-202ENST00000397643 ZNF720Q7Z2F6 126 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms