RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 EXOC7Q9UPT5 735 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 ZNF148Q9UQR1 794 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 KIF13BQ9NQT8 1826 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 WDR91A4D1P6 747 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 F8VP50 259 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 K7ERI5 159 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 PLSCR1O15162 318 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 HNRNPCL1O60812 293 aaKnown RBP5.27□□□□□ -1.57
SSR1-202ENST00000397511 ZBTB7AO95365 584 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 MAP3K6O95382 1288 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 SPATA31D3P0C874 917 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 MAPTP10636 758 aaKnown RBP5.27□□□□□ -1.57
SSR1-202ENST00000397511 GZMAP12544 262 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 RARGP13631 454 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 ATF2P15336 505 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 STX2P32856 288 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 CD97P48960 835 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 ACTR2P61160 394 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 FKBP1AP62942 108 aaKnown RBP5.27□□□□□ -1.57
SSR1-202ENST00000397511 CYLC2Q14093 348 aaPredicted RBP5.27□□□□□ -1.57
SSR1-202ENST00000397511 MTFR1Q15390 333 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 PPP2R5EQ16537 467 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 NFIL3Q16649 462 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 CLEC16AQ2KHT3 1053 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 SPATA31D4Q6ZUB0 917 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 TRIM50Q86XT4 487 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 ANKMY2Q8IV38 441 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 SNRNP27Q8WVK2 155 aaKnown RBP5.27□□□□□ -1.57
SSR1-202ENST00000397511 JDP2Q8WYK2 163 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 ART4Q93070 314 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 GMLQ99445 158 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 KIAA1683Q9H0B3 1180 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 APOBEC3GQ9HC16 384 aaKnown RBP5.27□□□□□ -1.57
SSR1-202ENST00000397511 JPH1Q9HDC5 661 aaPredicted RBP5.27□□□□□ -1.57
SSR1-202ENST00000397511 CYP26B1Q9NR63 512 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 RBAKQ9NYW8 714 aaPredicted RBP5.27□□□□□ -1.57
SSR1-202ENST00000397511 NDUFA13Q9P0J0 144 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 HACL1Q9UJ83 578 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 AGO2Q9UKV8 859 aaKnown RBP5.27□□□□□ -1.57
SSR1-202ENST00000397511 ZNRF3Q9ULT6 936 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 DIS3Q9Y2L1 958 aaKnown RBP5.27□□□□□ -1.57
SSR1-202ENST00000397511 UBE4BO95155 1302 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 ZNF541Q9H0D2 1346 aa5.27□□□□□ -1.57
SSR1-202ENST00000397511 ZNFX1Q9P2E3 1918 aaKnown RBP5.26□□□□□ -1.57
SSR1-202ENST00000397511 GOLGA8RI6L899 631 aa5.26□□□□□ -1.57
SSR1-202ENST00000397511 CAPN9O14815 690 aa5.26□□□□□ -1.57
SSR1-202ENST00000397511 WDR46O15213 610 aaKnown RBP5.26□□□□□ -1.57
SSR1-202ENST00000397511 ATP9BO43861 1147 aa5.26□□□□□ -1.57
SSR1-202ENST00000397511 CYP1A2P05177 515 aa5.26□□□□□ -1.57
SSR1-202ENST00000397511 KRT19P08727 400 aa5.26□□□□□ -1.57
SSR1-202ENST00000397511 PTPN4P29074 926 aa5.26□□□□□ -1.57
SSR1-202ENST00000397511 GPC3P51654 580 aa5.26□□□□□ -1.57
SSR1-202ENST00000397511 NOP14P78316 857 aaKnown RBP5.26□□□□□ -1.57
SSR1-202ENST00000397511 GAD2Q05329 585 aa5.26□□□□□ -1.57
SSR1-202ENST00000397511 MGAT5Q09328 741 aa5.26□□□□□ -1.57
SSR1-202ENST00000397511 STRN3Q13033 797 aa5.26□□□□□ -1.57
SSR1-202ENST00000397511 KHDC1Q4VXA5 237 aaKnown RBP5.26□□□□□ -1.57
SSR1-202ENST00000397511 MFSD5Q6N075 450 aa5.26□□□□□ -1.57
SSR1-202ENST00000397511 ZNF449Q6P9G9 518 aa5.26□□□□□ -1.57
SSR1-202ENST00000397511 SCUBE1Q8IWY4 988 aa5.26□□□□□ -1.57
SSR1-202ENST00000397511 LRRC71Q8N4P6 559 aa5.26□□□□□ -1.57
SSR1-202ENST00000397511 FLAD1Q8NFF5 587 aa5.26□□□□□ -1.57
SSR1-202ENST00000397511 PSPC1Q8WXF1 523 aaKnown RBP5.26□□□□□ -1.57
SSR1-202ENST00000397511 GFM2Q969S9 779 aaKnown RBP5.26□□□□□ -1.57
SSR1-202ENST00000397511 MCEEQ96PE7 176 aa5.26□□□□□ -1.57
SSR1-202ENST00000397511 KLF6Q99612 283 aaPredicted RBP5.26□□□□□ -1.57
SSR1-202ENST00000397511 DDX50Q9BQ39 737 aaKnown RBP5.26□□□□□ -1.57
SSR1-202ENST00000397511 SIKE1Q9BRV8 207 aa5.26□□□□□ -1.57
SSR1-202ENST00000397511 TMEM121Q9BTD3 319 aa5.26□□□□□ -1.57
SSR1-202ENST00000397511 MSTO1Q9BUK6 570 aa5.26□□□□□ -1.57
SSR1-202ENST00000397511 PITPNM3Q9BZ71 974 aa5.26□□□□□ -1.57
SSR1-202ENST00000397511 ALG13Q9NP73 1137 aaKnown RBP5.26□□□□□ -1.57
SSR1-202ENST00000397511 DDX43Q9NXZ2 648 aaKnown RBP5.26□□□□□ -1.57
SSR1-202ENST00000397511 UTP6Q9NYH9 597 aaKnown RBP5.26□□□□□ -1.57
SSR1-202ENST00000397511 HSFX1Q9UBD0 423 aa5.26□□□□□ -1.57
SSR1-202ENST00000397511 NXF1Q9UBU9 619 aaKnown RBP5.26□□□□□ -1.57
SSR1-202ENST00000397511 ZNF212Q9UDV6 495 aa5.26□□□□□ -1.57
SSR1-202ENST00000397511 TJP2Q9UDY2 1190 aa5.26□□□□□ -1.57
SSR1-202ENST00000397511 DNPEPQ9ULA0 475 aa5.26□□□□□ -1.57
SSR1-202ENST00000397511 TMED5Q9Y3A6 229 aa5.26□□□□□ -1.57
SSR1-202ENST00000397511 NUB1Q9Y5A7 615 aa5.26□□□□□ -1.57
SSR1-202ENST00000397511 RBBP6Q7Z6E9 1792 aaKnown RBP5.26□□□□□ -1.57
SSR1-202ENST00000397511 SMIM31A0A1B0GVY4 71 aa5.26□□□□□ -1.57
SSR1-202ENST00000397511 RASA4BC9J798 803 aa5.26□□□□□ -1.57
SSR1-202ENST00000397511 TRAFD1O14545 582 aaPredicted RBP5.26□□□□□ -1.57
SSR1-202ENST00000397511 BIRC5O15392 142 aa5.26□□□□□ -1.57
SSR1-202ENST00000397511 RASA4O43374 803 aa5.26□□□□□ -1.57
SSR1-202ENST00000397511 PABPC4LP0CB38 370 aaKnown RBP5.26□□□□□ -1.57
SSR1-202ENST00000397511 UNGP13051 313 aaPredicted RBP5.26□□□□□ -1.57
SSR1-202ENST00000397511 RFX1P22670 979 aa5.26□□□□□ -1.57
SSR1-202ENST00000397511 RGS2P41220 211 aa5.26□□□□□ -1.57
SSR1-202ENST00000397511 JAK3P52333 1124 aa5.26□□□□□ -1.57
SSR1-202ENST00000397511 YARSP54577 528 aaKnown RBP5.26□□□□□ -1.57
SSR1-202ENST00000397511 TFAMQ00059 246 aaKnown RBP5.26□□□□□ -1.57
SSR1-202ENST00000397511 KRT76Q01546 638 aa5.26□□□□□ -1.57
SSR1-202ENST00000397511 PLOD1Q02809 727 aaPredicted RBP5.26□□□□□ -1.57
SSR1-202ENST00000397511 TMEM132BQ14DG7 1078 aa5.26□□□□□ -1.57
SSR1-202ENST00000397511 SMAD1Q15797 465 aaKnown RBP5.26□□□□□ -1.57
SSR1-202ENST00000397511 MAP7D1Q3KQU3 841 aa5.26□□□□□ -1.57
SSR1-202ENST00000397511 WDR78Q5VTH9 848 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms