RNA–Protein interactions for RNA: ENST00000397417.6

IFT140-202, Transcript of intraflagellar transport 140, humanhuman

TSL 5

Gene IFT140, Length 4,023 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-202ENST00000397417 PPM1EQ8WY54 764 aa11.67□□□□□ -0.54
IFT140-202ENST00000397417 ATP6V1G3Q96LB4 118 aa11.67□□□□□ -0.54
IFT140-202ENST00000397417 GMLQ99445 158 aa11.67□□□□□ -0.54
IFT140-202ENST00000397417 CARD9Q9H257 536 aa11.67□□□□□ -0.54
IFT140-202ENST00000397417 MAP3K20Q9NYL2 800 aaKnown RBP11.67□□□□□ -0.54
IFT140-202ENST00000397417 SMIM10L2AP0DMW4 78 aa11.66□□□□□ -0.54
IFT140-202ENST00000397417 SMIM10L2BP0DMW5 78 aa11.66□□□□□ -0.54
IFT140-202ENST00000397417 MYBL1P10243 752 aa11.66□□□□□ -0.54
IFT140-202ENST00000397417 RARAP10276 462 aa11.66□□□□□ -0.54
IFT140-202ENST00000397417 YBX3P16989 372 aaKnown RBP eCLIP11.66□□□□□ -0.54
IFT140-202ENST00000397417 HOXA7P31268 230 aaPredicted RBP11.66□□□□□ -0.54
IFT140-202ENST00000397417 PCK1P35558 622 aa11.66□□□□□ -0.54
IFT140-202ENST00000397417 TKTL1P51854 596 aa11.66□□□□□ -0.54
IFT140-202ENST00000397417 ADCY2Q08462 1091 aa11.66□□□□□ -0.54
IFT140-202ENST00000397417 PIGHQ14442 188 aaPredicted RBP11.66□□□□□ -0.54
IFT140-202ENST00000397417 NAA25Q14CX7 972 aa11.66□□□□□ -0.54
IFT140-202ENST00000397417 PAPD7Q5XG87 772 aaKnown RBP11.66□□□□□ -0.54
IFT140-202ENST00000397417 CREG2Q8IUH2 290 aa11.66□□□□□ -0.54
IFT140-202ENST00000397417 BBS5Q8N3I7 341 aa11.66□□□□□ -0.54
IFT140-202ENST00000397417 TTC13Q8NBP0 860 aa11.66□□□□□ -0.54
IFT140-202ENST00000397417 VIPAS39Q9H9C1 493 aa11.66□□□□□ -0.54
IFT140-202ENST00000397417 BFARQ9NZS9 450 aa11.66□□□□□ -0.54
IFT140-202ENST00000397417 CNTNAP2Q9UHC6 1331 aa11.66□□□□□ -0.54
IFT140-202ENST00000397417 TCP11X1B4DZS4 312 aa11.66□□□□□ -0.54
IFT140-202ENST00000397417 P4HA2O15460 535 aa11.66□□□□□ -0.54
IFT140-202ENST00000397417 APOEP02649 317 aa11.66□□□□□ -0.54
IFT140-202ENST00000397417 ALDH7A1P49419 539 aaKnown RBP11.66□□□□□ -0.54
IFT140-202ENST00000397417 ATXN3P54252 364 aaPredicted RBP11.66□□□□□ -0.54
IFT140-202ENST00000397417 MAPK7Q13164 816 aa11.66□□□□□ -0.54
IFT140-202ENST00000397417 MEI1Q5TIA1 1274 aa11.66□□□□□ -0.54
IFT140-202ENST00000397417 CHSY1Q86X52 802 aa11.66□□□□□ -0.54
IFT140-202ENST00000397417 GPR20Q99678 358 aa11.66□□□□□ -0.54
IFT140-202ENST00000397417 ZFATQ9P243 1243 aa11.66□□□□□ -0.54
IFT140-202ENST00000397417 PPARGC1AQ9UBK2 798 aaKnown RBP11.66□□□□□ -0.54
IFT140-202ENST00000397417 ZC3H7BQ9UGR2 993 aaKnown RBP11.66□□□□□ -0.54
IFT140-202ENST00000397417 CDY2AQ9Y6F7 541 aa11.66□□□□□ -0.54
IFT140-202ENST00000397417 ZNF536O15090 1300 aa11.66□□□□□ -0.54
IFT140-202ENST00000397417 FZD9O00144 591 aa11.66□□□□□ -0.54
IFT140-202ENST00000397417 NEMP1O14524 444 aa11.66□□□□□ -0.54
IFT140-202ENST00000397417 KIAA0391O15091 583 aaKnown RBP11.66□□□□□ -0.54
IFT140-202ENST00000397417 TPH1P17752 444 aa11.66□□□□□ -0.54
IFT140-202ENST00000397417 PBX3P40426 434 aa11.66□□□□□ -0.54
IFT140-202ENST00000397417 BRCC3P46736 316 aa11.66□□□□□ -0.54
IFT140-202ENST00000397417 PPP2R2AP63151 447 aa11.66□□□□□ -0.54
IFT140-202ENST00000397417 CLEC16AQ2KHT3 1053 aa11.66□□□□□ -0.54
IFT140-202ENST00000397417 SV2CQ496J9 727 aa11.66□□□□□ -0.54
IFT140-202ENST00000397417 IRF2BP2Q7Z5L9 587 aa11.66□□□□□ -0.54
IFT140-202ENST00000397417 WDR49Q8IV35 697 aa11.66□□□□□ -0.54
IFT140-202ENST00000397417 RCOR2Q8IZ40 523 aa11.66□□□□□ -0.54
IFT140-202ENST00000397417 SYN2Q92777 582 aaPredicted RBP11.66□□□□□ -0.54
IFT140-202ENST00000397417 NUDCD1Q96RS6 583 aa11.66□□□□□ -0.54
IFT140-202ENST00000397417 USP18Q9UMW8 372 aa11.66□□□□□ -0.54
IFT140-202ENST00000397417 HMGB1P1B2RPK0 211 aaPredicted RBP11.65□□□□□ -0.54
IFT140-202ENST00000397417 NOL4O94818 638 aa11.65□□□□□ -0.54
IFT140-202ENST00000397417 CTCFP49711 727 aaPredicted RBP11.65□□□□□ -0.54
IFT140-202ENST00000397417 PRAMEP78395 509 aa11.65□□□□□ -0.54
IFT140-202ENST00000397417 ASPHQ12797 758 aa11.65□□□□□ -0.54
IFT140-202ENST00000397417 OVGP1Q12889 678 aa11.65□□□□□ -0.54
IFT140-202ENST00000397417 MMRN1Q13201 1228 aa11.65□□□□□ -0.54
IFT140-202ENST00000397417 C11orf63Q6NUN7 778 aa11.65□□□□□ -0.54
IFT140-202ENST00000397417 STKLD1Q8NE28 680 aa11.65□□□□□ -0.54
IFT140-202ENST00000397417 GIPC2Q8TF65 315 aa11.65□□□□□ -0.54
IFT140-202ENST00000397417 PCDHB18PQ96TA0 734 aa11.65□□□□□ -0.54
IFT140-202ENST00000397417 CNTNAP1P78357 1384 aa11.65□□□□□ -0.54
IFT140-202ENST00000397417 H3BRJ5 948 aa11.65□□□□□ -0.54
IFT140-202ENST00000397417 M0R2N6 131 aa11.65□□□□□ -0.54
IFT140-202ENST00000397417 STK25O00506 426 aa11.65□□□□□ -0.54
IFT140-202ENST00000397417 KRT37O76014 449 aa11.65□□□□□ -0.54
IFT140-202ENST00000397417 OR4Q2P0C623 313 aa11.65□□□□□ -0.54
IFT140-202ENST00000397417 USP17L7P0C7H9 530 aa11.65□□□□□ -0.54
IFT140-202ENST00000397417 AMPD1P23109 780 aa11.65□□□□□ -0.54
IFT140-202ENST00000397417 MAGEA4P43358 317 aa11.65□□□□□ -0.54
IFT140-202ENST00000397417 AMPD2Q01433 879 aa11.65□□□□□ -0.54
IFT140-202ENST00000397417 TWF1Q12792 350 aa11.65□□□□□ -0.54
IFT140-202ENST00000397417 FAM171A1Q5VUB5 890 aa11.65□□□□□ -0.54
IFT140-202ENST00000397417 SLC27A1Q6PCB7 646 aa11.65□□□□□ -0.54
IFT140-202ENST00000397417 NPNTQ6UXI9 565 aa11.65□□□□□ -0.54
IFT140-202ENST00000397417 NT5DC3Q86UY8 548 aa11.65□□□□□ -0.54
IFT140-202ENST00000397417 BRI3BPQ8WY22 251 aa11.65□□□□□ -0.54
IFT140-202ENST00000397417 ALG3Q92685 438 aa11.65□□□□□ -0.54
IFT140-202ENST00000397417 IFT43Q96FT9 208 aa11.65□□□□□ -0.54
IFT140-202ENST00000397417 RPRD1AQ96P16 312 aaPredicted RBP11.65□□□□□ -0.54
IFT140-202ENST00000397417 DDX23Q9BUQ8 820 aaKnown RBP11.65□□□□□ -0.54
IFT140-202ENST00000397417 PCMTD2Q9NV79 361 aa11.65□□□□□ -0.54
IFT140-202ENST00000397417 KAT6AQ92794 2004 aa11.65□□□□□ -0.54
IFT140-202ENST00000397417 PRR23AA6NEV1 266 aa11.65□□□□□ -0.54
IFT140-202ENST00000397417 GPR25O00155 361 aa11.65□□□□□ -0.54
IFT140-202ENST00000397417 BANF1O75531 89 aa11.65□□□□□ -0.54
IFT140-202ENST00000397417 MICAL2O94851 1124 aa11.65□□□□□ -0.54
IFT140-202ENST00000397417 CHN1P15882 459 aa11.65□□□□□ -0.54
IFT140-202ENST00000397417 PCSK1P29120 753 aa11.65□□□□□ -0.54
IFT140-202ENST00000397417 MEA1Q16626 185 aa11.65□□□□□ -0.54
IFT140-202ENST00000397417 HVCN1Q96D96 273 aa11.65□□□□□ -0.54
IFT140-202ENST00000397417 TMEM169Q96HH4 297 aa11.65□□□□□ -0.54
IFT140-202ENST00000397417 SPATA17Q96L03 361 aa11.65□□□□□ -0.54
IFT140-202ENST00000397417 CYTH2Q99418 400 aa11.65□□□□□ -0.54
IFT140-202ENST00000397417 EPAS1Q99814 870 aa11.65□□□□□ -0.54
IFT140-202ENST00000397417 VPS33BQ9H267 617 aa11.65□□□□□ -0.54
IFT140-202ENST00000397417 WDCPQ9H6R7 721 aa11.65□□□□□ -0.54
IFT140-202ENST00000397417 DNPEPQ9ULA0 475 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms