RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 GJA1P17302 382 aa22.51■■□□□ 1.19
TSPAN4-206ENST00000397408 ANXA13P27216 316 aa22.51■■□□□ 1.19
TSPAN4-206ENST00000397408 MTMR3Q13615 1198 aa22.51■■□□□ 1.19
TSPAN4-206ENST00000397408 KRT31Q15323 416 aa22.51■■□□□ 1.19
TSPAN4-206ENST00000397408 PAQR9Q6ZVX9 377 aa22.51■■□□□ 1.19
TSPAN4-206ENST00000397408 RNF135Q8IUD6 432 aa22.51■■□□□ 1.19
TSPAN4-206ENST00000397408 FUKQ8N0W3 1084 aa22.51■■□□□ 1.19
TSPAN4-206ENST00000397408 UBR7Q8N806 425 aa22.51■■□□□ 1.19
TSPAN4-206ENST00000397408 KRT82Q9NSB4 513 aa22.51■■□□□ 1.19
TSPAN4-206ENST00000397408 TMEM30AQ9NV96 361 aa22.51■■□□□ 1.19
TSPAN4-206ENST00000397408 EPS15L1Q9UBC2 864 aa22.51■■□□□ 1.19
TSPAN4-206ENST00000397408 MUC3AQ02505 3323 aa22.5■■□□□ 1.19
TSPAN4-206ENST00000397408 SLC38A8A6NNN8 435 aa22.5■■□□□ 1.19
TSPAN4-206ENST00000397408 SLC9A1P19634 815 aa22.5■■□□□ 1.19
TSPAN4-206ENST00000397408 ADORA2BP29275 332 aa22.5■■□□□ 1.19
TSPAN4-206ENST00000397408 ZNF165P49910 485 aa22.5■■□□□ 1.19
TSPAN4-206ENST00000397408 RAD23BP54727 409 aa22.5■■□□□ 1.19
TSPAN4-206ENST00000397408 GCNT1Q02742 428 aa22.5■■□□□ 1.19
TSPAN4-206ENST00000397408 PHLDB3Q6NSJ2 640 aa22.5■■□□□ 1.19
TSPAN4-206ENST00000397408 SLC4A11Q8NBS3 891 aa22.5■■□□□ 1.19
TSPAN4-206ENST00000397408 SHKBP1Q8TBC3 707 aa22.5■■□□□ 1.19
TSPAN4-206ENST00000397408 SMARCD1Q96GM5 515 aa22.5■■□□□ 1.19
TSPAN4-206ENST00000397408 TMEM176AQ96HP8 235 aa22.5■■□□□ 1.19
TSPAN4-206ENST00000397408 MAGED2Q9UNF1 606 aaPredicted RBP22.5■■□□□ 1.19
TSPAN4-206ENST00000397408 A0A1W2PRU2 124 aa22.49■■□□□ 1.19
TSPAN4-206ENST00000397408 MOSPD3O75425 235 aa22.49■■□□□ 1.19
TSPAN4-206ENST00000397408 AP1G2O75843 785 aa22.49■■□□□ 1.19
TSPAN4-206ENST00000397408 LAMP2P13473 410 aa22.49■■□□□ 1.19
TSPAN4-206ENST00000397408 HMGA1P17096 107 aaKnown RBP22.49■■□□□ 1.19
TSPAN4-206ENST00000397408 GABRR2P28476 465 aa22.49■■□□□ 1.19
TSPAN4-206ENST00000397408 SPATA17Q96L03 361 aa22.49■■□□□ 1.19
TSPAN4-206ENST00000397408 C8orf48Q96LL4 319 aa22.49■■□□□ 1.19
TSPAN4-206ENST00000397408 HEXIM2Q96MH2 286 aaKnown RBP22.49■■□□□ 1.19
TSPAN4-206ENST00000397408 LIMD1Q9UGP4 676 aa22.49■■□□□ 1.19
TSPAN4-206ENST00000397408 ZFP37Q9Y6Q3 630 aaPredicted RBP22.49■■□□□ 1.19
TSPAN4-206ENST00000397408 TNFRSF10AO00220 468 aa22.48■■□□□ 1.19
TSPAN4-206ENST00000397408 NOL4O94818 638 aa22.48■■□□□ 1.19
TSPAN4-206ENST00000397408 MICAL2O94851 1124 aa22.48■■□□□ 1.19
TSPAN4-206ENST00000397408 FGF19O95750 216 aa22.48■■□□□ 1.19
TSPAN4-206ENST00000397408 TPM2P07951 284 aa22.48■■□□□ 1.19
TSPAN4-206ENST00000397408 ZNF18P17022 549 aa22.48■■□□□ 1.19
TSPAN4-206ENST00000397408 ACO1P21399 889 aaKnown RBP22.48■■□□□ 1.19
TSPAN4-206ENST00000397408 PON1P27169 355 aa22.48■■□□□ 1.19
TSPAN4-206ENST00000397408 APBA1Q02410 837 aa22.48■■□□□ 1.19
TSPAN4-206ENST00000397408 TEAD2Q15562 447 aa22.48■■□□□ 1.19
TSPAN4-206ENST00000397408 TMEM270Q6UE05 265 aa22.48■■□□□ 1.19
TSPAN4-206ENST00000397408 GAREM2Q75VX8 874 aa22.48■■□□□ 1.19
TSPAN4-206ENST00000397408 DHX40Q8IX18 779 aaKnown RBP22.48■■□□□ 1.19
TSPAN4-206ENST00000397408 ANKRD20A12PQ8NF67 263 aa22.48■■□□□ 1.19
TSPAN4-206ENST00000397408 MCRS1Q96EZ8 462 aa22.48■■□□□ 1.19
TSPAN4-206ENST00000397408 CYFIP2Q96F07 1278 aa22.48■■□□□ 1.19
TSPAN4-206ENST00000397408 CEP295NLQ96MC4 621 aa22.48■■□□□ 1.19
TSPAN4-206ENST00000397408 KREMEN1Q96MU8 473 aa22.48■■□□□ 1.19
TSPAN4-206ENST00000397408 GCNAQ96QF7 691 aa22.48■■□□□ 1.19
TSPAN4-206ENST00000397408 HNRNPABQ99729 332 aaKnown RBP22.48■■□□□ 1.19
TSPAN4-206ENST00000397408 VPS16Q9H269 839 aa22.48■■□□□ 1.19
TSPAN4-206ENST00000397408 HSD3B7Q9H2F3 369 aa22.48■■□□□ 1.19
TSPAN4-206ENST00000397408 IL21Q9HBE4 155 aa22.48■■□□□ 1.19
TSPAN4-206ENST00000397408 UBE2TQ9NPD8 197 aaPredicted RBP22.48■■□□□ 1.19
TSPAN4-206ENST00000397408 DMAP1Q9NPF5 467 aaPredicted RBP22.48■■□□□ 1.19
TSPAN4-206ENST00000397408 PCDHB4Q9Y5E5 795 aa22.48■■□□□ 1.19
TSPAN4-206ENST00000397408 SMTNL1A8MU46 457 aa22.48■■□□□ 1.19
TSPAN4-206ENST00000397408 FAM200BP0CF97 657 aa22.48■■□□□ 1.19
TSPAN4-206ENST00000397408 CDC25CP30307 473 aa22.48■■□□□ 1.19
TSPAN4-206ENST00000397408 PPP1R26Q5T8A7 1209 aaPredicted RBP22.48■■□□□ 1.19
TSPAN4-206ENST00000397408 GJB7Q6PEY0 223 aa22.48■■□□□ 1.19
TSPAN4-206ENST00000397408 KCNK16Q96T55 309 aa22.48■■□□□ 1.19
TSPAN4-206ENST00000397408 ATXN3LQ9H3M9 355 aa22.48■■□□□ 1.19
TSPAN4-206ENST00000397408 GDE1Q9NZC3 331 aa22.48■■□□□ 1.19
TSPAN4-206ENST00000397408 APEX2Q9UBZ4 518 aa22.48■■□□□ 1.19
TSPAN4-206ENST00000397408 MUTYHQ9UIF7 546 aa22.48■■□□□ 1.19
TSPAN4-206ENST00000397408 MYH10P35580 1976 aa22.47■■□□□ 1.19
TSPAN4-206ENST00000397408 DLL1O00548 723 aa22.47■■□□□ 1.19
TSPAN4-206ENST00000397408 ASGR2P07307 311 aa22.47■■□□□ 1.19
TSPAN4-206ENST00000397408 CDK11BP21127 795 aaKnown RBP22.47■■□□□ 1.19
TSPAN4-206ENST00000397408 DENND5BQ6ZUT9 1274 aa22.47■■□□□ 1.19
TSPAN4-206ENST00000397408 ST13P5Q8NFI4 369 aaPredicted RBP22.47■■□□□ 1.19
TSPAN4-206ENST00000397408 KHSRPQ92945 711 aaKnown RBP eCLIP22.47■■□□□ 1.19
TSPAN4-206ENST00000397408 TRMT2BQ96GJ1 504 aaKnown RBP22.47■■□□□ 1.19
TSPAN4-206ENST00000397408 SMOQ99835 787 aa22.47■■□□□ 1.19
TSPAN4-206ENST00000397408 SLITRK6Q9H5Y7 841 aa22.47■■□□□ 1.19
TSPAN4-206ENST00000397408 UXTQ9UBK9 157 aaPredicted RBP22.47■■□□□ 1.19
TSPAN4-206ENST00000397408 LIMA1Q9UHB6 759 aaKnown RBP22.47■■□□□ 1.19
TSPAN4-206ENST00000397408 GREB1Q4ZG55 1949 aa22.46■■□□□ 1.19
TSPAN4-206ENST00000397408 CD19P15391 556 aa22.46■■□□□ 1.19
TSPAN4-206ENST00000397408 COPB1P53618 953 aaKnown RBP22.46■■□□□ 1.19
TSPAN4-206ENST00000397408 MFAP3P55082 362 aa22.46■■□□□ 1.19
TSPAN4-206ENST00000397408 MAP3K7CLP57077 242 aa22.46■■□□□ 1.19
TSPAN4-206ENST00000397408 CYP4F8P98187 520 aa22.46■■□□□ 1.19
TSPAN4-206ENST00000397408 STXBP5Q5T5C0 1151 aa22.46■■□□□ 1.19
TSPAN4-206ENST00000397408 POTEHQ6S545 545 aa22.46■■□□□ 1.19
TSPAN4-206ENST00000397408 ENOSF1Q7L5Y1 443 aa22.46■■□□□ 1.19
TSPAN4-206ENST00000397408 RBBP8NLQ8NC74 664 aaPredicted RBP22.46■■□□□ 1.19
TSPAN4-206ENST00000397408 ZMIZ2Q8NF64 920 aa22.46■■□□□ 1.19
TSPAN4-206ENST00000397408 MYRFLQ96LU7 910 aa22.46■■□□□ 1.19
TSPAN4-206ENST00000397408 SIX2Q9NPC8 291 aa22.46■■□□□ 1.19
TSPAN4-206ENST00000397408 MYO10Q9HD67 2058 aa22.45■■□□□ 1.18
TSPAN4-206ENST00000397408 BECN2A8MW95 431 aa22.45■■□□□ 1.18
TSPAN4-206ENST00000397408 BEST1O76090 585 aa22.45■■□□□ 1.18
TSPAN4-206ENST00000397408 ATP1A3P13637 1013 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms