RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 CYTH4Q9UIA0 394 aa16.97■□□□□ 0.31
SNX6-202ENST00000396526 RIPK2O43353 540 aa16.96■□□□□ 0.31
SNX6-202ENST00000396526 MDH1P40925 334 aaKnown RBP16.96■□□□□ 0.31
SNX6-202ENST00000396526 CDKN2BP42772 138 aa16.96■□□□□ 0.31
SNX6-202ENST00000396526 TAF6P49848 677 aa16.96■□□□□ 0.31
SNX6-202ENST00000396526 SV2CQ496J9 727 aa16.96■□□□□ 0.31
SNX6-202ENST00000396526 GNASQ5JWF2 1037 aa16.96■□□□□ 0.31
SNX6-202ENST00000396526 PGM2Q96G03 612 aa16.96■□□□□ 0.31
SNX6-202ENST00000396526 MTG1Q9BT17 334 aaPredicted RBP16.96■□□□□ 0.31
SNX6-202ENST00000396526 RSAD1Q9HA92 442 aa16.96■□□□□ 0.31
SNX6-202ENST00000396526 PCSK1NQ9UHG2 260 aa16.96■□□□□ 0.31
SNX6-202ENST00000396526 HUS1O60921 280 aa16.96■□□□□ 0.31
SNX6-202ENST00000396526 VCPP55072 806 aaKnown RBP16.96■□□□□ 0.31
SNX6-202ENST00000396526 MAGOHP61326 146 aaKnown RBP16.96■□□□□ 0.31
SNX6-202ENST00000396526 TFDP2Q14188 446 aa16.96■□□□□ 0.31
SNX6-202ENST00000396526 KCTD19Q17RG1 926 aaPredicted RBP16.96■□□□□ 0.31
SNX6-202ENST00000396526 LRRC31Q6UY01 552 aa16.96■□□□□ 0.31
SNX6-202ENST00000396526 SESTD1Q86VW0 696 aa16.96■□□□□ 0.31
SNX6-202ENST00000396526 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.96■□□□□ 0.31
SNX6-202ENST00000396526 TNIP3Q96KP6 325 aa16.96■□□□□ 0.31
SNX6-202ENST00000396526 HERPUD2Q9BSE4 406 aa16.96■□□□□ 0.31
SNX6-202ENST00000396526 TMEM109Q9BVC6 243 aa16.96■□□□□ 0.31
SNX6-202ENST00000396526 SGK1O00141 431 aa16.95■□□□□ 0.3
SNX6-202ENST00000396526 AKAP5P24588 427 aa16.95■□□□□ 0.3
SNX6-202ENST00000396526 TAOK1Q7L7X3 1001 aa16.95■□□□□ 0.3
SNX6-202ENST00000396526 PCGF5Q86SE9 256 aa16.95■□□□□ 0.3
SNX6-202ENST00000396526 RFX6Q8HWS3 928 aa16.95■□□□□ 0.3
SNX6-202ENST00000396526 APPL2Q8NEU8 664 aa16.95■□□□□ 0.3
SNX6-202ENST00000396526 LENG1Q96BZ8 264 aaPredicted RBP16.95■□□□□ 0.3
SNX6-202ENST00000396526 DNPEPQ9ULA0 475 aa16.95■□□□□ 0.3
SNX6-202ENST00000396526 USP18Q9UMW8 372 aa16.95■□□□□ 0.3
SNX6-202ENST00000396526 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.95■□□□□ 0.3
SNX6-202ENST00000396526 SMIM28A0A1B0GU29 152 aa16.95■□□□□ 0.3
SNX6-202ENST00000396526 KDELR1P24390 212 aa16.95■□□□□ 0.3
SNX6-202ENST00000396526 GNL1P36915 607 aaPredicted RBP16.95■□□□□ 0.3
SNX6-202ENST00000396526 ADAM17P78536 824 aa16.95■□□□□ 0.3
SNX6-202ENST00000396526 STK32AQ8WU08 396 aa16.95■□□□□ 0.3
SNX6-202ENST00000396526 RSAD2Q8WXG1 361 aa16.95■□□□□ 0.3
SNX6-202ENST00000396526 NKD2Q969F2 451 aaPredicted RBP16.95■□□□□ 0.3
SNX6-202ENST00000396526 ZMAT2Q96NC0 199 aaKnown RBP16.95■□□□□ 0.3
SNX6-202ENST00000396526 TUBGCP4Q9UGJ1 667 aa16.95■□□□□ 0.3
SNX6-202ENST00000396526 KPNA7A9QM74 516 aa16.95■□□□□ 0.3
SNX6-202ENST00000396526 CST8O60676 142 aa16.95■□□□□ 0.3
SNX6-202ENST00000396526 AGTP01019 485 aa16.95■□□□□ 0.3
SNX6-202ENST00000396526 IFNB1P01574 187 aa16.95■□□□□ 0.3
SNX6-202ENST00000396526 CYP3A5P20815 502 aa16.95■□□□□ 0.3
SNX6-202ENST00000396526 MIPP30301 263 aa16.95■□□□□ 0.3
SNX6-202ENST00000396526 SDC4P31431 198 aa16.95■□□□□ 0.3
SNX6-202ENST00000396526 BOLA3Q53S33 107 aa16.95■□□□□ 0.3
SNX6-202ENST00000396526 SAPCD2Q86UD0 394 aa16.95■□□□□ 0.3
SNX6-202ENST00000396526 FAM118BQ9BPY3 351 aa16.95■□□□□ 0.3
SNX6-202ENST00000396526 MRPL45Q9BRJ2 306 aaKnown RBP16.95■□□□□ 0.3
SNX6-202ENST00000396526 CALN1Q9BXU9 219 aa16.95■□□□□ 0.3
SNX6-202ENST00000396526 CITO14578 2027 aa16.95■□□□□ 0.3
SNX6-202ENST00000396526 SMIM23A6NLE4 172 aa16.94■□□□□ 0.3
SNX6-202ENST00000396526 E5RJQ4 531 aa16.94■□□□□ 0.3
SNX6-202ENST00000396526 EBAG9O00559 213 aa16.94■□□□□ 0.3
SNX6-202ENST00000396526 NDUFAB1O14561 156 aa16.94■□□□□ 0.3
SNX6-202ENST00000396526 ITGAVP06756 1048 aa16.94■□□□□ 0.3
SNX6-202ENST00000396526 KCNE1P15382 129 aa16.94■□□□□ 0.3
SNX6-202ENST00000396526 TCF4P15884 667 aa16.94■□□□□ 0.3
SNX6-202ENST00000396526 ARSEP51690 589 aa16.94■□□□□ 0.3
SNX6-202ENST00000396526 FCGRTP55899 365 aa16.94■□□□□ 0.3
SNX6-202ENST00000396526 SMTNL2Q2TAL5 461 aa16.94■□□□□ 0.3
SNX6-202ENST00000396526 RXFP2Q8WXD0 754 aa16.94■□□□□ 0.3
SNX6-202ENST00000396526 HSPH1Q92598 858 aa16.94■□□□□ 0.3
SNX6-202ENST00000396526 C18orf25Q96B23 403 aaPredicted RBP16.94■□□□□ 0.3
SNX6-202ENST00000396526 TJP2Q9UDY2 1190 aa16.94■□□□□ 0.3
SNX6-202ENST00000396526 ZNF236Q9UL36 1845 aa16.94■□□□□ 0.3
SNX6-202ENST00000396526 P3H1Q32P28 736 aa16.94■□□□□ 0.3
SNX6-202ENST00000396526 PPP1R26Q5T8A7 1209 aaPredicted RBP16.94■□□□□ 0.3
SNX6-202ENST00000396526 BBS12Q6ZW61 710 aa16.94■□□□□ 0.3
SNX6-202ENST00000396526 C12orf29Q8N999 325 aa16.94■□□□□ 0.3
SNX6-202ENST00000396526 CDC42EP4Q9H3Q1 356 aaKnown RBP16.94■□□□□ 0.3
SNX6-202ENST00000396526 FAM49BQ9NUQ9 324 aa16.94■□□□□ 0.3
SNX6-202ENST00000396526 KLK14Q9P0G3 267 aa16.94■□□□□ 0.3
SNX6-202ENST00000396526 GJD2Q9UKL4 321 aa16.94■□□□□ 0.3
SNX6-202ENST00000396526 SRRM3A6NNA2 597 aaPredicted RBP16.94■□□□□ 0.3
SNX6-202ENST00000396526 MCF2LO15068 1137 aa16.94■□□□□ 0.3
SNX6-202ENST00000396526 SLC10A3P09131 477 aa16.94■□□□□ 0.3
SNX6-202ENST00000396526 ACADSBP45954 432 aa16.94■□□□□ 0.3
SNX6-202ENST00000396526 RGS7P49802 495 aa16.94■□□□□ 0.3
SNX6-202ENST00000396526 DYNLT1P63172 113 aa16.94■□□□□ 0.3
SNX6-202ENST00000396526 PURAQ00577 322 aaKnown RBP16.94■□□□□ 0.3
SNX6-202ENST00000396526 SLC25A11Q02978 314 aaKnown RBP16.94■□□□□ 0.3
SNX6-202ENST00000396526 KRT81Q14533 505 aa16.94■□□□□ 0.3
SNX6-202ENST00000396526 KCNT1Q5JUK3 1230 aa16.94■□□□□ 0.3
SNX6-202ENST00000396526 ARHGAP17Q68EM7 881 aa16.94■□□□□ 0.3
SNX6-202ENST00000396526 ALKAL1Q6UXT8 129 aa16.94■□□□□ 0.3
SNX6-202ENST00000396526 ALLCQ8N6M5 410 aa16.94■□□□□ 0.3
SNX6-202ENST00000396526 PPP1R13LQ8WUF5 828 aa16.94■□□□□ 0.3
SNX6-202ENST00000396526 ACSF2Q96CM8 615 aaPredicted RBP16.94■□□□□ 0.3
SNX6-202ENST00000396526 SLC38A7Q9NVC3 462 aa16.94■□□□□ 0.3
SNX6-202ENST00000396526 RSPH14Q9UHP6 348 aa16.94■□□□□ 0.3
SNX6-202ENST00000396526 TPX2Q9ULW0 747 aaKnown RBP16.94■□□□□ 0.3
SNX6-202ENST00000396526 CAPN15O75808 1086 aa16.93■□□□□ 0.3
SNX6-202ENST00000396526 TTC4O95801 387 aa16.93■□□□□ 0.3
SNX6-202ENST00000396526 IVDP26440 423 aa16.93■□□□□ 0.3
SNX6-202ENST00000396526 BCAT1P54687 386 aa16.93■□□□□ 0.3
SNX6-202ENST00000396526 TTC19Q6DKK2 380 aaPredicted RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms