RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 E5RJQ4 531 aa15.72■□□□□ 0.11
CBX3-202ENST00000396386 TP73O15350 636 aa15.72■□□□□ 0.11
CBX3-202ENST00000396386 EIF3HO15372 352 aaKnown RBP eCLIP15.72■□□□□ 0.11
CBX3-202ENST00000396386 RIPK2O43353 540 aa15.72■□□□□ 0.11
CBX3-202ENST00000396386 DUSP11O75319 330 aaKnown RBP15.72■□□□□ 0.11
CBX3-202ENST00000396386 SHBGP04278 402 aa15.72■□□□□ 0.11
CBX3-202ENST00000396386 PFKMP08237 780 aa15.72■□□□□ 0.11
CBX3-202ENST00000396386 KCNE1P15382 129 aa15.72■□□□□ 0.11
CBX3-202ENST00000396386 KLRC2P26717 231 aa15.72■□□□□ 0.11
CBX3-202ENST00000396386 PNPLA4P41247 253 aa15.72■□□□□ 0.11
CBX3-202ENST00000396386 VPS41P49754 854 aa15.72■□□□□ 0.11
CBX3-202ENST00000396386 APLP1P51693 650 aa15.72■□□□□ 0.11
CBX3-202ENST00000396386 SLC29A2Q14542 456 aa15.72■□□□□ 0.11
CBX3-202ENST00000396386 SMTNL2Q2TAL5 461 aa15.72■□□□□ 0.11
CBX3-202ENST00000396386 FBXO47Q5MNV8 452 aa15.72■□□□□ 0.11
CBX3-202ENST00000396386 IZUMO3Q5VZ72 239 aa15.72■□□□□ 0.11
CBX3-202ENST00000396386 OR6B2Q6IFH4 312 aa15.72■□□□□ 0.11
CBX3-202ENST00000396386 TAF2Q6P1X5 1199 aa15.72■□□□□ 0.11
CBX3-202ENST00000396386 ACOT1Q86TX2 421 aa15.72■□□□□ 0.11
CBX3-202ENST00000396386 ARFGAP1Q8N6T3 406 aa15.72■□□□□ 0.11
CBX3-202ENST00000396386 C12orf29Q8N999 325 aa15.72■□□□□ 0.11
CBX3-202ENST00000396386 ASNSD1Q9NWL6 643 aa15.72■□□□□ 0.11
CBX3-202ENST00000396386 HESX1Q9UBX0 185 aa15.72■□□□□ 0.11
CBX3-202ENST00000396386 DNPEPQ9ULA0 475 aa15.72■□□□□ 0.11
CBX3-202ENST00000396386 SCN10AQ9Y5Y9 1956 aa15.72■□□□□ 0.11
CBX3-202ENST00000396386 SMIM28A0A1B0GU29 152 aa15.71■□□□□ 0.11
CBX3-202ENST00000396386 C6orf222P0C671 652 aaPredicted RBP15.71■□□□□ 0.11
CBX3-202ENST00000396386 IL1R2P27930 398 aa15.71■□□□□ 0.11
CBX3-202ENST00000396386 HPDP32754 393 aaPredicted RBP15.71■□□□□ 0.11
CBX3-202ENST00000396386 ZNF143P52747 638 aaPredicted RBP15.71■□□□□ 0.11
CBX3-202ENST00000396386 VCPP55072 806 aaKnown RBP15.71■□□□□ 0.11
CBX3-202ENST00000396386 XKR4Q5GH76 650 aa15.71■□□□□ 0.11
CBX3-202ENST00000396386 PPP1R26Q5T8A7 1209 aaPredicted RBP15.71■□□□□ 0.11
CBX3-202ENST00000396386 OR6B3Q8NGW1 331 aa15.71■□□□□ 0.11
CBX3-202ENST00000396386 CNPY3Q9BT09 278 aa15.71■□□□□ 0.11
CBX3-202ENST00000396386 FRMD8P1Q9BZ68 369 aaPredicted RBP15.71■□□□□ 0.11
CBX3-202ENST00000396386 DNAI2Q9GZS0 605 aa15.71■□□□□ 0.11
CBX3-202ENST00000396386 CDC42EP4Q9H3Q1 356 aaKnown RBP15.71■□□□□ 0.11
CBX3-202ENST00000396386 FAM49BQ9NUQ9 324 aa15.71■□□□□ 0.11
CBX3-202ENST00000396386 CWC15Q9P013 229 aaKnown RBP15.71■□□□□ 0.11
CBX3-202ENST00000396386 KLK14Q9P0G3 267 aa15.71■□□□□ 0.11
CBX3-202ENST00000396386 CALCOCO1Q9P1Z2 691 aa15.71■□□□□ 0.11
CBX3-202ENST00000396386 PIRO00625 290 aa15.71■□□□□ 0.11
CBX3-202ENST00000396386 MIPP30301 263 aa15.71■□□□□ 0.11
CBX3-202ENST00000396386 PCK1P35558 622 aa15.71■□□□□ 0.11
CBX3-202ENST00000396386 CHKAP35790 457 aa15.71■□□□□ 0.11
CBX3-202ENST00000396386 TAZQ16635 292 aa15.71■□□□□ 0.11
CBX3-202ENST00000396386 SV2CQ496J9 727 aa15.71■□□□□ 0.11
CBX3-202ENST00000396386 PKDCCQ504Y2 493 aa15.71■□□□□ 0.11
CBX3-202ENST00000396386 ARHGAP17Q68EM7 881 aa15.71■□□□□ 0.11
CBX3-202ENST00000396386 TTC30AQ86WT1 665 aa15.71■□□□□ 0.11
CBX3-202ENST00000396386 ALLCQ8N6M5 410 aa15.71■□□□□ 0.11
CBX3-202ENST00000396386 DNAJC5GQ8N7S2 189 aa15.71■□□□□ 0.11
CBX3-202ENST00000396386 TRPV1Q8NER1 839 aa15.71■□□□□ 0.11
CBX3-202ENST00000396386 NKD2Q969F2 451 aaPredicted RBP15.71■□□□□ 0.11
CBX3-202ENST00000396386 MTG1Q9BT17 334 aaPredicted RBP15.71■□□□□ 0.11
CBX3-202ENST00000396386 TMEM109Q9BVC6 243 aa15.71■□□□□ 0.11
CBX3-202ENST00000396386 ZMYND15Q9H091 742 aa15.71■□□□□ 0.11
CBX3-202ENST00000396386 AAASQ9NRG9 546 aa15.71■□□□□ 0.11
CBX3-202ENST00000396386 NOVA2Q9UNW9 492 aaKnown RBP15.71■□□□□ 0.11
CBX3-202ENST00000396386 ZNF148Q9UQR1 794 aa15.71■□□□□ 0.11
CBX3-202ENST00000396386 DRG1Q9Y295 367 aaKnown RBP15.71■□□□□ 0.11
CBX3-202ENST00000396386 IPPQ9Y573 584 aa15.71■□□□□ 0.11
CBX3-202ENST00000396386 NME7Q9Y5B8 376 aa15.71■□□□□ 0.11
CBX3-202ENST00000396386 MYADML2A6NDP7 307 aa15.7■□□□□ 0.1
CBX3-202ENST00000396386 C2CD4BA6NLJ0 364 aa15.7■□□□□ 0.1
CBX3-202ENST00000396386 A8MXQ7 604 aa15.7■□□□□ 0.1
CBX3-202ENST00000396386 FAM155AB1AL88 458 aaPredicted RBP15.7■□□□□ 0.1
CBX3-202ENST00000396386 M0QZ92 97 aa15.7■□□□□ 0.1
CBX3-202ENST00000396386 KDELR1P24390 212 aa15.7■□□□□ 0.1
CBX3-202ENST00000396386 RGS7P49802 495 aa15.7■□□□□ 0.1
CBX3-202ENST00000396386 TAF6P49848 677 aa15.7■□□□□ 0.1
CBX3-202ENST00000396386 SNX16P57768 344 aa15.7■□□□□ 0.1
CBX3-202ENST00000396386 MRPS6P82932 125 aaKnown RBP15.7■□□□□ 0.1
CBX3-202ENST00000396386 SOWAHAQ2M3V2 549 aa15.7■□□□□ 0.1
CBX3-202ENST00000396386 CEP128Q6ZU80 1094 aa15.7■□□□□ 0.1
CBX3-202ENST00000396386 BBS12Q6ZW61 710 aa15.7■□□□□ 0.1
CBX3-202ENST00000396386 SESTD1Q86VW0 696 aa15.7■□□□□ 0.1
CBX3-202ENST00000396386 TTC13Q8NBP0 860 aa15.7■□□□□ 0.1
CBX3-202ENST00000396386 TLCD1Q96CP7 247 aa15.7■□□□□ 0.1
CBX3-202ENST00000396386 HAUS1Q96CS2 278 aa15.7■□□□□ 0.1
CBX3-202ENST00000396386 USP18Q9UMW8 372 aa15.7■□□□□ 0.1
CBX3-202ENST00000396386 CASP8AP2Q9UKL3 1982 aa15.7■□□□□ 0.1
CBX3-202ENST00000396386 PIK3R2O00459 728 aa15.69■□□□□ 0.1
CBX3-202ENST00000396386 DPYSL4O14531 572 aa15.69■□□□□ 0.1
CBX3-202ENST00000396386 NDC80O14777 642 aa15.69■□□□□ 0.1
CBX3-202ENST00000396386 CAND2O75155 1236 aa15.69■□□□□ 0.1
CBX3-202ENST00000396386 TRUB2O95900 331 aaKnown RBP15.69■□□□□ 0.1
CBX3-202ENST00000396386 ITGAVP06756 1048 aa15.69■□□□□ 0.1
CBX3-202ENST00000396386 CYBAP13498 195 aa15.69■□□□□ 0.1
CBX3-202ENST00000396386 CTGFP29279 349 aa15.69■□□□□ 0.1
CBX3-202ENST00000396386 HNRNPH2P55795 449 aaKnown RBP15.69■□□□□ 0.1
CBX3-202ENST00000396386 GJA9P57773 515 aa15.69■□□□□ 0.1
CBX3-202ENST00000396386 PPP2R2AP63151 447 aa15.69■□□□□ 0.1
CBX3-202ENST00000396386 OASLQ15646 514 aaKnown RBP15.69■□□□□ 0.1
CBX3-202ENST00000396386 P3H1Q32P28 736 aa15.69■□□□□ 0.1
CBX3-202ENST00000396386 KCNT1Q5JUK3 1230 aa15.69■□□□□ 0.1
CBX3-202ENST00000396386 MFSD14CQ5VZR4 134 aa15.69■□□□□ 0.1
CBX3-202ENST00000396386 TTC19Q6DKK2 380 aaPredicted RBP15.69■□□□□ 0.1
CBX3-202ENST00000396386 TWF2Q6IBS0 349 aaKnown RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms