RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 FKBP1BP68106 108 aa17.64■□□□□ 0.41
NUP50-202ENST00000396096 PPARDQ03181 441 aa17.64■□□□□ 0.41
NUP50-202ENST00000396096 MYO1EQ12965 1108 aa17.64■□□□□ 0.41
NUP50-202ENST00000396096 GPS1Q13098 491 aa17.64■□□□□ 0.41
NUP50-202ENST00000396096 ACVR2BQ13705 512 aa17.64■□□□□ 0.41
NUP50-202ENST00000396096 GKAP1Q5VSY0 366 aaPredicted RBP17.64■□□□□ 0.41
NUP50-202ENST00000396096 EMC1Q8N766 993 aa17.64■□□□□ 0.41
NUP50-202ENST00000396096 KIF12Q96FN5 646 aa17.64■□□□□ 0.41
NUP50-202ENST00000396096 CFAP57Q96MR6 1250 aa17.64■□□□□ 0.41
NUP50-202ENST00000396096 NT5C1AQ9BXI3 368 aa17.64■□□□□ 0.41
NUP50-202ENST00000396096 ASNSD1Q9NWL6 643 aa17.64■□□□□ 0.41
NUP50-202ENST00000396096 ACTL7BQ9Y614 415 aa17.64■□□□□ 0.41
NUP50-202ENST00000396096 UTRNP46939 3433 aa17.64■□□□□ 0.41
NUP50-202ENST00000396096 TRIP11Q15643 1979 aa17.64■□□□□ 0.41
NUP50-202ENST00000396096 RNF8O76064 485 aa17.63■□□□□ 0.41
NUP50-202ENST00000396096 TRUB2O95900 331 aaKnown RBP17.63■□□□□ 0.41
NUP50-202ENST00000396096 MIPP30301 263 aa17.63■□□□□ 0.41
NUP50-202ENST00000396096 OTUD4Q01804 1114 aaKnown RBP17.63■□□□□ 0.41
NUP50-202ENST00000396096 PCBP1Q15365 356 aaKnown RBP eCLIP17.63■□□□□ 0.41
NUP50-202ENST00000396096 FAM110CQ1W6H9 321 aa17.63■□□□□ 0.41
NUP50-202ENST00000396096 VSTM1Q6UX27 236 aa17.63■□□□□ 0.41
NUP50-202ENST00000396096 PLEKHH3Q7Z736 793 aa17.63■□□□□ 0.41
NUP50-202ENST00000396096 CPLX4Q7Z7G2 160 aa17.63■□□□□ 0.41
NUP50-202ENST00000396096 PCGF5Q86SE9 256 aa17.63■□□□□ 0.41
NUP50-202ENST00000396096 CACNA2D3Q8IZS8 1091 aa17.63■□□□□ 0.41
NUP50-202ENST00000396096 OTUD6BQ8N6M0 293 aa17.63■□□□□ 0.41
NUP50-202ENST00000396096 ACTL9Q8TC94 416 aa17.63■□□□□ 0.41
NUP50-202ENST00000396096 PDCD11Q14690 1871 aaKnown RBP17.63■□□□□ 0.41
NUP50-202ENST00000396096 CST8O60676 142 aa17.63■□□□□ 0.41
NUP50-202ENST00000396096 ENDOD1O94919 500 aa17.63■□□□□ 0.41
NUP50-202ENST00000396096 ETS1P14921 441 aa17.63■□□□□ 0.41
NUP50-202ENST00000396096 PECAM1P16284 738 aaPredicted RBP17.63■□□□□ 0.41
NUP50-202ENST00000396096 HOXA11P31270 313 aaPredicted RBP17.63■□□□□ 0.41
NUP50-202ENST00000396096 IRF5Q13568 498 aa17.63■□□□□ 0.41
NUP50-202ENST00000396096 SMTNL2Q2TAL5 461 aa17.63■□□□□ 0.41
NUP50-202ENST00000396096 CCDC38Q502W7 563 aa17.63■□□□□ 0.41
NUP50-202ENST00000396096 HAUS1Q96CS2 278 aa17.63■□□□□ 0.41
NUP50-202ENST00000396096 C9orf72Q96LT7 481 aa17.63■□□□□ 0.41
NUP50-202ENST00000396096 PARK7Q99497 189 aaKnown RBP17.63■□□□□ 0.41
NUP50-202ENST00000396096 CNPY3Q9BT09 278 aa17.63■□□□□ 0.41
NUP50-202ENST00000396096 TMEM121Q9BTD3 319 aa17.63■□□□□ 0.41
NUP50-202ENST00000396096 SAYSD1Q9NPB0 183 aa17.63■□□□□ 0.41
NUP50-202ENST00000396096 USP18Q9UMW8 372 aa17.63■□□□□ 0.41
NUP50-202ENST00000396096 FARP1Q9Y4F1 1045 aaPredicted RBP17.63■□□□□ 0.41
NUP50-202ENST00000396096 SLC15A5A6NIM6 579 aa17.62■□□□□ 0.41
NUP50-202ENST00000396096 C2CD4BA6NLJ0 364 aa17.62■□□□□ 0.41
NUP50-202ENST00000396096 SGK1O00141 431 aa17.62■□□□□ 0.41
NUP50-202ENST00000396096 ALOX15BO15296 676 aa17.62■□□□□ 0.41
NUP50-202ENST00000396096 PFKMP08237 780 aa17.62■□□□□ 0.41
NUP50-202ENST00000396096 GPD1P21695 349 aa17.62■□□□□ 0.41
NUP50-202ENST00000396096 ZBTB6Q15916 424 aa17.62■□□□□ 0.41
NUP50-202ENST00000396096 KCNT1Q5JUK3 1230 aa17.62■□□□□ 0.41
NUP50-202ENST00000396096 FAM102AQ5T9C2 384 aaPredicted RBP17.62■□□□□ 0.41
NUP50-202ENST00000396096 TDRPQ86YL5 185 aa17.62■□□□□ 0.41
NUP50-202ENST00000396096 UBA3Q8TBC4 463 aa17.62■□□□□ 0.41
NUP50-202ENST00000396096 PRCCQ92733 491 aaPredicted RBP17.62■□□□□ 0.41
NUP50-202ENST00000396096 SNX27Q96L92 541 aa17.62■□□□□ 0.41
NUP50-202ENST00000396096 GCOM2Q9BZD3 368 aaPredicted RBP17.62■□□□□ 0.41
NUP50-202ENST00000396096 GBA2Q9HCG7 927 aaPredicted RBP17.62■□□□□ 0.41
NUP50-202ENST00000396096 CTNNAL1Q9UBT7 734 aa17.62■□□□□ 0.41
NUP50-202ENST00000396096 TSPAN16Q9UKR8 245 aa17.62■□□□□ 0.41
NUP50-202ENST00000396096 SCN1AP35498 2009 aa17.61■□□□□ 0.41
NUP50-202ENST00000396096 APOC4-APOC2K7ER74 178 aa17.61■□□□□ 0.41
NUP50-202ENST00000396096 GPR32O75388 356 aa17.61■□□□□ 0.41
NUP50-202ENST00000396096 FSBPO95073 299 aa17.61■□□□□ 0.41
NUP50-202ENST00000396096 NPTXRO95502 500 aa17.61■□□□□ 0.41
NUP50-202ENST00000396096 APOC2P02655 101 aa17.61■□□□□ 0.41
NUP50-202ENST00000396096 SETSIPP0DME0 302 aa17.61■□□□□ 0.41
NUP50-202ENST00000396096 PLCB3Q01970 1234 aa17.61■□□□□ 0.41
NUP50-202ENST00000396096 IFT88Q13099 833 aa17.61■□□□□ 0.41
NUP50-202ENST00000396096 PKDCCQ504Y2 493 aa17.61■□□□□ 0.41
NUP50-202ENST00000396096 SLC27A1Q6PCB7 646 aa17.61■□□□□ 0.41
NUP50-202ENST00000396096 PIGWQ7Z7B1 504 aa17.61■□□□□ 0.41
NUP50-202ENST00000396096 LRRC52Q8N7C0 313 aa17.61■□□□□ 0.41
NUP50-202ENST00000396096 KCTD6Q8NC69 237 aa17.61■□□□□ 0.41
NUP50-202ENST00000396096 PRMT1Q99873 361 aaKnown RBP17.61■□□□□ 0.41
NUP50-202ENST00000396096 ZNF408Q9H9D4 720 aa17.61■□□□□ 0.41
NUP50-202ENST00000396096 RSAD1Q9HA92 442 aa17.61■□□□□ 0.41
NUP50-202ENST00000396096 SETD4Q9NVD3 440 aa17.61■□□□□ 0.41
NUP50-202ENST00000396096 NAALADL1Q9UQQ1 740 aa17.61■□□□□ 0.41
NUP50-202ENST00000396096 TMEM120BA0PK00 339 aa17.61■□□□□ 0.41
NUP50-202ENST00000396096 DPYSL4O14531 572 aa17.61■□□□□ 0.41
NUP50-202ENST00000396096 KIZQ2M2Z5 673 aa17.61■□□□□ 0.41
NUP50-202ENST00000396096 FAM183BPQ6ZVS7 135 aa17.61■□□□□ 0.41
NUP50-202ENST00000396096 CYP4V2Q6ZWL3 525 aaPredicted RBP17.61■□□□□ 0.41
NUP50-202ENST00000396096 NPLOC4Q8TAT6 608 aa17.61■□□□□ 0.41
NUP50-202ENST00000396096 P3H4Q92791 437 aa17.61■□□□□ 0.41
NUP50-202ENST00000396096 CABS1Q96KC9 395 aa17.61■□□□□ 0.41
NUP50-202ENST00000396096 PPCSQ9HAB8 311 aa17.61■□□□□ 0.41
NUP50-202ENST00000396096 PCSK1NQ9UHG2 260 aa17.61■□□□□ 0.41
NUP50-202ENST00000396096 NRCAMQ92823 1304 aa17.6■□□□□ 0.41
NUP50-202ENST00000396096 SMIM35A0A1B0GVV1 85 aa17.6■□□□□ 0.41
NUP50-202ENST00000396096 MBLAC1A4D2B0 266 aaPredicted RBP17.6■□□□□ 0.41
NUP50-202ENST00000396096 A6NJR5 290 aa17.6■□□□□ 0.41
NUP50-202ENST00000396096 SMAPO00193 183 aa17.6■□□□□ 0.41
NUP50-202ENST00000396096 ADCY6O43306 1168 aa17.6■□□□□ 0.41
NUP50-202ENST00000396096 CD48P09326 243 aa17.6■□□□□ 0.41
NUP50-202ENST00000396096 DYNLT1P63172 113 aa17.6■□□□□ 0.41
NUP50-202ENST00000396096 SLC20A2Q08357 652 aa17.6■□□□□ 0.41
NUP50-202ENST00000396096 NR1H3Q13133 447 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms