RNA–Protein interactions for RNA: ENST00000396060.6

GTF2A2-202, Transcript of general transcription factor IIA subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A2, Length 1,582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A2-202ENST00000396060 SLITRK6Q9H5Y7 841 aa12.53□□□□□ -0.4
GTF2A2-202ENST00000396060 FAM49BQ9NUQ9 324 aa12.53□□□□□ -0.4
GTF2A2-202ENST00000396060 DDX43Q9NXZ2 648 aaKnown RBP12.53□□□□□ -0.4
GTF2A2-202ENST00000396060 TJP2Q9UDY2 1190 aa12.53□□□□□ -0.4
GTF2A2-202ENST00000396060 TBX21Q9UL17 535 aa12.53□□□□□ -0.4
GTF2A2-202ENST00000396060 TET1Q8NFU7 2136 aa12.53□□□□□ -0.4
GTF2A2-202ENST00000396060 E5RJQ4 531 aa12.52□□□□□ -0.4
GTF2A2-202ENST00000396060 KRIT1O00522 736 aa12.52□□□□□ -0.4
GTF2A2-202ENST00000396060 DPYSL4O14531 572 aa12.52□□□□□ -0.4
GTF2A2-202ENST00000396060 HCRTO43612 131 aa12.52□□□□□ -0.4
GTF2A2-202ENST00000396060 RFC2P35250 354 aa12.52□□□□□ -0.4
GTF2A2-202ENST00000396060 ZNF143P52747 638 aaPredicted RBP12.52□□□□□ -0.4
GTF2A2-202ENST00000396060 SLC6A3Q01959 620 aa12.52□□□□□ -0.4
GTF2A2-202ENST00000396060 CYP1B1Q16678 543 aa12.52□□□□□ -0.4
GTF2A2-202ENST00000396060 LONRF2Q1L5Z9 754 aa12.52□□□□□ -0.4
GTF2A2-202ENST00000396060 SEL1L2Q5TEA6 688 aa12.52□□□□□ -0.4
GTF2A2-202ENST00000396060 KIAA0319Q5VV43 1072 aa12.52□□□□□ -0.4
GTF2A2-202ENST00000396060 CC2D1AQ6P1N0 951 aaPredicted RBP12.52□□□□□ -0.4
GTF2A2-202ENST00000396060 OLFML1Q6UWY5 402 aa12.52□□□□□ -0.4
GTF2A2-202ENST00000396060 DNAH12Q6ZR08 3092 aa12.52□□□□□ -0.4
GTF2A2-202ENST00000396060 METTL23Q86XA0 190 aa12.52□□□□□ -0.4
GTF2A2-202ENST00000396060 SLC13A5Q86YT5 568 aaPredicted RBP12.52□□□□□ -0.4
GTF2A2-202ENST00000396060 MYCBPAPQ8TBZ2 947 aa12.52□□□□□ -0.4
GTF2A2-202ENST00000396060 SLC2A14Q8TDB8 520 aa12.52□□□□□ -0.4
GTF2A2-202ENST00000396060 MAIP1Q8WWC4 291 aa12.52□□□□□ -0.4
GTF2A2-202ENST00000396060 KHSRPQ92945 711 aaKnown RBP eCLIP12.52□□□□□ -0.41e-7■■■■□ 23.7
GTF2A2-202ENST00000396060 PNKPQ96T60 521 aa12.52□□□□□ -0.4
GTF2A2-202ENST00000396060 RTP3Q9BQQ7 232 aa12.52□□□□□ -0.4
GTF2A2-202ENST00000396060 SYT15Q9BQS2 421 aa12.52□□□□□ -0.4
GTF2A2-202ENST00000396060 LRRC1Q9BTT6 524 aa12.52□□□□□ -0.4
GTF2A2-202ENST00000396060 EPC1Q9H2F5 836 aa12.52□□□□□ -0.4
GTF2A2-202ENST00000396060 HIPK3Q9H422 1215 aa12.52□□□□□ -0.4
GTF2A2-202ENST00000396060 CRTAC1Q9NQ79 661 aa12.52□□□□□ -0.4
GTF2A2-202ENST00000396060 TBC1D13Q9NVG8 400 aa12.52□□□□□ -0.4
GTF2A2-202ENST00000396060 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.52□□□□□ -0.4
GTF2A2-202ENST00000396060 PCDHB8Q9UN66 801 aa12.52□□□□□ -0.4
GTF2A2-202ENST00000396060 INPP5FQ9Y2H2 1132 aa12.52□□□□□ -0.4
GTF2A2-202ENST00000396060 PCDHB7Q9Y5E2 793 aa12.52□□□□□ -0.4
GTF2A2-202ENST00000396060 C2CD4BA6NLJ0 364 aa12.52□□□□□ -0.41
GTF2A2-202ENST00000396060 F8VP50 259 aa12.52□□□□□ -0.41
GTF2A2-202ENST00000396060 PAPSS1O43252 624 aaPredicted RBP12.52□□□□□ -0.41
GTF2A2-202ENST00000396060 DDHD2O94830 711 aa12.52□□□□□ -0.41
GTF2A2-202ENST00000396060 GJB6O95452 261 aa12.52□□□□□ -0.41
GTF2A2-202ENST00000396060 RHOXF2BP0C7M4 288 aa12.52□□□□□ -0.41
GTF2A2-202ENST00000396060 CCDC130P13994 396 aa12.52□□□□□ -0.41
GTF2A2-202ENST00000396060 TNFRSF8P28908 595 aa12.52□□□□□ -0.41
GTF2A2-202ENST00000396060 PTPN7P35236 360 aa12.52□□□□□ -0.41
GTF2A2-202ENST00000396060 PCK1P35558 622 aa12.52□□□□□ -0.41
GTF2A2-202ENST00000396060 TAS2R40P59535 323 aa12.52□□□□□ -0.41
GTF2A2-202ENST00000396060 COPS2P61201 443 aa12.52□□□□□ -0.41
GTF2A2-202ENST00000396060 SLC26A9Q7LBE3 791 aa12.52□□□□□ -0.41
GTF2A2-202ENST00000396060 RCOR2Q8IZ40 523 aa12.52□□□□□ -0.41
GTF2A2-202ENST00000396060 EIF1ADQ8N9N8 165 aaKnown RBP12.52□□□□□ -0.41
GTF2A2-202ENST00000396060 JOSD2Q8TAC2 188 aa12.52□□□□□ -0.41
GTF2A2-202ENST00000396060 CASD1Q96PB1 797 aa12.52□□□□□ -0.41
GTF2A2-202ENST00000396060 PKMYT1Q99640 499 aa12.52□□□□□ -0.41
GTF2A2-202ENST00000396060 LPIN3Q9BQK8 851 aa12.52□□□□□ -0.41
GTF2A2-202ENST00000396060 RHOXF2Q9BQY4 288 aa12.52□□□□□ -0.41
GTF2A2-202ENST00000396060 CNPY3Q9BT09 278 aa12.52□□□□□ -0.41
GTF2A2-202ENST00000396060 B3GNT5Q9BYG0 378 aa12.52□□□□□ -0.41
GTF2A2-202ENST00000396060 DDX56Q9NY93 547 aaKnown RBP12.52□□□□□ -0.41
GTF2A2-202ENST00000396060 CACNG4Q9UBN1 327 aa12.52□□□□□ -0.41
GTF2A2-202ENST00000396060 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.51□□□□□ -0.41
GTF2A2-202ENST00000396060 GOLGA8SH3BPF8 625 aa12.51□□□□□ -0.41
GTF2A2-202ENST00000396060 TULP2O00295 520 aa12.51□□□□□ -0.41
GTF2A2-202ENST00000396060 ATP8B1O43520 1251 aa12.51□□□□□ -0.41
GTF2A2-202ENST00000396060 ATP2C2O75185 946 aa12.51□□□□□ -0.41
GTF2A2-202ENST00000396060 OAZ2O95190 189 aa12.51□□□□□ -0.41
GTF2A2-202ENST00000396060 ZRANB2O95218 330 aaKnown RBP eCLIP12.51□□□□□ -0.41
GTF2A2-202ENST00000396060 NPR3P17342 541 aa12.51□□□□□ -0.41
GTF2A2-202ENST00000396060 TKTP29401 623 aaKnown RBP12.51□□□□□ -0.41
GTF2A2-202ENST00000396060 CLCN6P51797 869 aa12.51□□□□□ -0.41
GTF2A2-202ENST00000396060 SLC8A3P57103 927 aa12.51□□□□□ -0.41
GTF2A2-202ENST00000396060 RNASE9P60153 205 aaKnown RBP12.51□□□□□ -0.41
GTF2A2-202ENST00000396060 ZNF211Q13398 564 aaPredicted RBP12.51□□□□□ -0.41
GTF2A2-202ENST00000396060 SIX1Q15475 284 aaPredicted RBP12.51□□□□□ -0.41
GTF2A2-202ENST00000396060 TCTN1Q2MV58 587 aa12.51□□□□□ -0.41
GTF2A2-202ENST00000396060 TRIM60Q495X7 471 aa12.51□□□□□ -0.41
GTF2A2-202ENST00000396060 OR6B2Q6IFH4 312 aa12.51□□□□□ -0.41
GTF2A2-202ENST00000396060 CCNI2Q6ZMN8 369 aaPredicted RBP12.51□□□□□ -0.41
GTF2A2-202ENST00000396060 FAM183BPQ6ZVS7 135 aa12.51□□□□□ -0.41
GTF2A2-202ENST00000396060 ZNF280BQ86YH2 543 aa12.51□□□□□ -0.41
GTF2A2-202ENST00000396060 NPAS4Q8IUM7 802 aa12.51□□□□□ -0.41
GTF2A2-202ENST00000396060 ARFGAP1Q8N6T3 406 aa12.51□□□□□ -0.41
GTF2A2-202ENST00000396060 C12orf50Q8NA57 414 aaPredicted RBP12.51□□□□□ -0.41
GTF2A2-202ENST00000396060 ST7Q9NRC1 585 aa12.51□□□□□ -0.41
GTF2A2-202ENST00000396060 METTL5Q9NRN9 209 aaKnown RBP12.51□□□□□ -0.41
GTF2A2-202ENST00000396060 ASNSD1Q9NWL6 643 aa12.51□□□□□ -0.41
GTF2A2-202ENST00000396060 STIM2Q9P246 746 aa12.51□□□□□ -0.41
GTF2A2-202ENST00000396060 EFR3BQ9Y2G0 817 aa12.51□□□□□ -0.41
GTF2A2-202ENST00000396060 TANC1Q9C0D5 1861 aa12.51□□□□□ -0.41
GTF2A2-202ENST00000396060 GOLGA6L10A0A0M3HER8 536 aa12.5□□□□□ -0.41
GTF2A2-202ENST00000396060 SYN3O14994 580 aa12.5□□□□□ -0.41
GTF2A2-202ENST00000396060 SART1O43290 800 aaKnown RBP12.5□□□□□ -0.41
GTF2A2-202ENST00000396060 TRAPPC3O43617 180 aa12.5□□□□□ -0.41
GTF2A2-202ENST00000396060 B4GALT3O60512 393 aa12.5□□□□□ -0.41
GTF2A2-202ENST00000396060 ERLIN1O75477 346 aa12.5□□□□□ -0.41
GTF2A2-202ENST00000396060 MYCP01106 439 aaPredicted RBP12.5□□□□□ -0.41
GTF2A2-202ENST00000396060 GLI1P08151 1106 aa12.5□□□□□ -0.41
GTF2A2-202ENST00000396060 KRT7P08729 469 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms