RNA–Protein interactions for RNA: ENST00000395853.5

MSH5-205, Transcript of mutS homolog 5, humanhuman

TSL 2 BASIC

Gene MSH5, Length 2,704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-205ENST00000395853 STK36Q9NRP7 1315 aa9.29□□□□□ -0.92
MSH5-205ENST00000395853 KPNA6O60684 536 aa9.29□□□□□ -0.92
MSH5-205ENST00000395853 SMIM18P0DKX4 95 aa9.29□□□□□ -0.92
MSH5-205ENST00000395853 STX2P32856 288 aa9.29□□□□□ -0.92
MSH5-205ENST00000395853 PLCD1P51178 756 aa9.29□□□□□ -0.92
MSH5-205ENST00000395853 CDR2Q01850 454 aa9.29□□□□□ -0.92
MSH5-205ENST00000395853 NFE2L1Q14494 772 aa9.29□□□□□ -0.92
MSH5-205ENST00000395853 EDRF1Q3B7T1 1238 aa9.29□□□□□ -0.92
MSH5-205ENST00000395853 NAALADL2Q58DX5 795 aa9.29□□□□□ -0.92
MSH5-205ENST00000395853 SPATA1Q5VX52 437 aa9.29□□□□□ -0.92
MSH5-205ENST00000395853 PPP4R4Q6NUP7 873 aa9.29□□□□□ -0.92
MSH5-205ENST00000395853 FAM122CQ6P4D5 195 aa9.29□□□□□ -0.92
MSH5-205ENST00000395853 POTEHQ6S545 545 aa9.29□□□□□ -0.92
MSH5-205ENST00000395853 KSR1Q8IVT5 923 aa9.29□□□□□ -0.92
MSH5-205ENST00000395853 NOX5Q96PH1 765 aa9.29□□□□□ -0.92
MSH5-205ENST00000395853 MED15Q96RN5 788 aa9.29□□□□□ -0.92
MSH5-205ENST00000395853 LBHD1Q9BQE6 289 aaPredicted RBP9.29□□□□□ -0.92
MSH5-205ENST00000395853 TRIM55Q9BYV6 548 aa9.29□□□□□ -0.92
MSH5-205ENST00000395853 AIPL1Q9NZN9 384 aa9.29□□□□□ -0.92
MSH5-205ENST00000395853 SALL4Q9UJQ4 1053 aa9.29□□□□□ -0.92
MSH5-205ENST00000395853 POU2F3Q9UKI9 436 aa9.29□□□□□ -0.92
MSH5-205ENST00000395853 HPSEQ9Y251 543 aa9.29□□□□□ -0.92
MSH5-205ENST00000395853 hCG_1642624A0A1W2PR95 340 aa9.29□□□□□ -0.92
MSH5-205ENST00000395853 TRIM64A6NGJ6 449 aa9.29□□□□□ -0.92
MSH5-205ENST00000395853 TRIM64BA6NI03 449 aa9.29□□□□□ -0.92
MSH5-205ENST00000395853 PCP4L1A6NKN8 68 aa9.29□□□□□ -0.92
MSH5-205ENST00000395853 A6NL46 340 aa9.29□□□□□ -0.92
MSH5-205ENST00000395853 BTBD18B2RXH4 712 aa9.29□□□□□ -0.92
MSH5-205ENST00000395853 CLOCKO15516 846 aa9.29□□□□□ -0.92
MSH5-205ENST00000395853 FGRP09769 529 aa9.29□□□□□ -0.92
MSH5-205ENST00000395853 TBXAS1P24557 533 aaPredicted RBP9.29□□□□□ -0.92
MSH5-205ENST00000395853 NUP107P57740 925 aa9.29□□□□□ -0.92
MSH5-205ENST00000395853 AP2B1P63010 937 aa9.29□□□□□ -0.92
MSH5-205ENST00000395853 KLHL30Q0D2K2 578 aa9.29□□□□□ -0.92
MSH5-205ENST00000395853 SMARCB1Q12824 385 aa9.29□□□□□ -0.92
MSH5-205ENST00000395853 ATP1A4Q13733 1029 aa9.29□□□□□ -0.92
MSH5-205ENST00000395853 KCTD2Q14681 263 aa9.29□□□□□ -0.92
MSH5-205ENST00000395853 SLC39A14Q15043 492 aa9.29□□□□□ -0.92
MSH5-205ENST00000395853 PPP6R3Q5H9R7 873 aaPredicted RBP9.29□□□□□ -0.92
MSH5-205ENST00000395853 FAM47AQ5JRC9 791 aa9.29□□□□□ -0.92
MSH5-205ENST00000395853 DCLRE1AQ6PJP8 1040 aa9.29□□□□□ -0.92
MSH5-205ENST00000395853 FAM9CQ8IZT9 166 aa9.29□□□□□ -0.92
MSH5-205ENST00000395853 SH3RF3Q8TEJ3 882 aaPredicted RBP9.29□□□□□ -0.92
MSH5-205ENST00000395853 OLFM1Q99784 485 aa9.29□□□□□ -0.92
MSH5-205ENST00000395853 LPIN3Q9BQK8 851 aa9.29□□□□□ -0.92
MSH5-205ENST00000395853 SENP6Q9GZR1 1112 aaPredicted RBP9.29□□□□□ -0.92
MSH5-205ENST00000395853 ZNF287Q9HBT7 754 aa9.29□□□□□ -0.92
MSH5-205ENST00000395853 WASH6PQ9NQA3 447 aa9.29□□□□□ -0.92
MSH5-205ENST00000395853 DNM3Q9UQ16 869 aa9.29□□□□□ -0.92
MSH5-205ENST00000395853 IQANK1A0A1B0GTG1 560 aa9.28□□□□□ -0.92
MSH5-205ENST00000395853 MANSC4A6NHS7 340 aaPredicted RBP9.28□□□□□ -0.92
MSH5-205ENST00000395853 INO80B-WBP1J3KQ70 363 aa9.28□□□□□ -0.92
MSH5-205ENST00000395853 RAD51CO43502 376 aa9.28□□□□□ -0.92
MSH5-205ENST00000395853 HNRNPCL1O60812 293 aaKnown RBP9.28□□□□□ -0.92
MSH5-205ENST00000395853 RNGTTO60942 597 aaKnown RBP9.28□□□□□ -0.92
MSH5-205ENST00000395853 SIN3BO75182 1162 aa9.28□□□□□ -0.92
MSH5-205ENST00000395853 RSL1D1O76021 490 aaKnown RBP9.28□□□□□ -0.92
MSH5-205ENST00000395853 CAPN1P07384 714 aa9.28□□□□□ -0.92
MSH5-205ENST00000395853 CDH2P19022 906 aaPredicted RBP9.28□□□□□ -0.92
MSH5-205ENST00000395853 GNG2P59768 71 aa9.28□□□□□ -0.92
MSH5-205ENST00000395853 MKRN3Q13064 507 aaKnown RBP9.28□□□□□ -0.92
MSH5-205ENST00000395853 PTK2BQ14289 1009 aa9.28□□□□□ -0.92
MSH5-205ENST00000395853 PTPAQ15257 358 aa9.28□□□□□ -0.92
MSH5-205ENST00000395853 CNGA2Q16280 664 aa9.28□□□□□ -0.92
MSH5-205ENST00000395853 ZNF829Q3KNS6 432 aaPredicted RBP9.28□□□□□ -0.92
MSH5-205ENST00000395853 C6orf118Q5T5N4 469 aa9.28□□□□□ -0.92
MSH5-205ENST00000395853 LDLRAD1Q5T700 205 aa9.28□□□□□ -0.92
MSH5-205ENST00000395853 ZNF449Q6P9G9 518 aa9.28□□□□□ -0.92
MSH5-205ENST00000395853 UNC5DQ6UXZ4 953 aa9.28□□□□□ -0.92
MSH5-205ENST00000395853 GPR141Q7Z602 305 aa9.28□□□□□ -0.92
MSH5-205ENST00000395853 METTL3Q86U44 580 aaKnown RBP9.28□□□□□ -0.92
MSH5-205ENST00000395853 APOBEC3FQ8IUX4 373 aaKnown RBP9.28□□□□□ -0.92
MSH5-205ENST00000395853 USP38Q8NB14 1042 aa9.28□□□□□ -0.92
MSH5-205ENST00000395853 U2AF1L4Q8WU68 220 aaKnown RBP9.28□□□□□ -0.92
MSH5-205ENST00000395853 SLC7A3Q8WY07 619 aa9.28□□□□□ -0.92
MSH5-205ENST00000395853 MAML1Q92585 1016 aa9.28□□□□□ -0.92
MSH5-205ENST00000395853 SHISA4Q96DD7 197 aa9.28□□□□□ -0.92
MSH5-205ENST00000395853 ABCG4Q9H172 646 aa9.28□□□□□ -0.92
MSH5-205ENST00000395853 AGO2Q9UKV8 859 aaKnown RBP9.28□□□□□ -0.92
MSH5-205ENST00000395853 WASF2Q9Y6W5 498 aa9.28□□□□□ -0.92
MSH5-205ENST00000395853 MAST2Q6P0Q8 1798 aa9.28□□□□□ -0.92
MSH5-205ENST00000395853 GOLGA8QA0A0J9YX86 632 aa9.28□□□□□ -0.92
MSH5-205ENST00000395853 PVALEFA0A1B0GWK0 134 aa9.28□□□□□ -0.92
MSH5-205ENST00000395853 GOLGA8OA6NCC3 632 aa9.28□□□□□ -0.92
MSH5-205ENST00000395853 LRRC72A6NJI9 287 aa9.28□□□□□ -0.92
MSH5-205ENST00000395853 FADS2P1A8MWK0 482 aa9.28□□□□□ -0.92
MSH5-205ENST00000395853 GOLGA8NF8WBI6 632 aa9.28□□□□□ -0.92
MSH5-205ENST00000395853 GOLGA8RI6L899 631 aa9.28□□□□□ -0.92
MSH5-205ENST00000395853 TK2O00142 265 aa9.28□□□□□ -0.92
MSH5-205ENST00000395853 RGS16O15492 202 aaPredicted RBP9.28□□□□□ -0.92
MSH5-205ENST00000395853 GABBR2O75899 941 aa9.28□□□□□ -0.92
MSH5-205ENST00000395853 PRLP01236 227 aa9.28□□□□□ -0.92
MSH5-205ENST00000395853 PRKCAP17252 672 aa9.28□□□□□ -0.92
MSH5-205ENST00000395853 KRT20P35900 424 aa9.28□□□□□ -0.92
MSH5-205ENST00000395853 KRT2P35908 639 aa9.28□□□□□ -0.92
MSH5-205ENST00000395853 YARSP54577 528 aaKnown RBP9.28□□□□□ -0.92
MSH5-205ENST00000395853 ERVK-9P63128 1117 aa9.28□□□□□ -0.92
MSH5-205ENST00000395853 TNNC1P63316 161 aa9.28□□□□□ -0.92
MSH5-205ENST00000395853 TAGLNQ01995 201 aaKnown RBP9.28□□□□□ -0.92
MSH5-205ENST00000395853 RGS21Q2M5E4 152 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms