RNA–Protein interactions for RNA: ENST00000395756.5

SREBF1-204, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 3,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-204ENST00000395756 MIPP30301 263 aa18.82■□□□□ 0.6
SREBF1-204ENST00000395756 IFNAR2P48551 515 aa18.82■□□□□ 0.6
SREBF1-204ENST00000395756 MYO1EQ12965 1108 aa18.82■□□□□ 0.6
SREBF1-204ENST00000395756 MMRN1Q13201 1228 aa18.82■□□□□ 0.6
SREBF1-204ENST00000395756 BIRC2Q13490 618 aa18.82■□□□□ 0.6
SREBF1-204ENST00000395756 GOLGA7BQ2TAP0 167 aa18.82■□□□□ 0.6
SREBF1-204ENST00000395756 TRAIPQ9BWF2 469 aa18.82■□□□□ 0.6
SREBF1-204ENST00000395756 ADAMTS10Q9H324 1103 aa18.82■□□□□ 0.6
SREBF1-204ENST00000395756 DPEP3Q9H4B8 488 aa18.82■□□□□ 0.6
SREBF1-204ENST00000395756 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.82■□□□□ 0.6
SREBF1-204ENST00000395756 hCG_1818297A0A087WSY0 165 aa18.81■□□□□ 0.6
SREBF1-204ENST00000395756 CCDC189A1A4V9 331 aa18.81■□□□□ 0.6
SREBF1-204ENST00000395756 RECQL4O94761 1208 aa18.81■□□□□ 0.6
SREBF1-204ENST00000395756 PAEPP09466 180 aa18.81■□□□□ 0.6
SREBF1-204ENST00000395756 CREB1P16220 341 aa18.81■□□□□ 0.6
SREBF1-204ENST00000395756 CDH5P33151 784 aaPredicted RBP18.81■□□□□ 0.6
SREBF1-204ENST00000395756 CDKN2BP42772 138 aa18.81■□□□□ 0.6
SREBF1-204ENST00000395756 POU5F1BQ06416 359 aa18.81■□□□□ 0.6
SREBF1-204ENST00000395756 ZNF618Q5T7W0 954 aa18.81■□□□□ 0.6
SREBF1-204ENST00000395756 ZNF467Q7Z7K2 595 aaPredicted RBP18.81■□□□□ 0.6
SREBF1-204ENST00000395756 CFAP57Q96MR6 1250 aa18.81■□□□□ 0.6
SREBF1-204ENST00000395756 CCT8L2Q96SF2 557 aa18.81■□□□□ 0.6
SREBF1-204ENST00000395756 NMRK2Q9NPI5 230 aa18.81■□□□□ 0.6
SREBF1-204ENST00000395756 GPATCH2LQ9NWQ4 482 aa18.81■□□□□ 0.6
SREBF1-204ENST00000395756 GJD2Q9UKL4 321 aa18.81■□□□□ 0.6
SREBF1-204ENST00000395756 SH3BP1Q9Y3L3 701 aa18.81■□□□□ 0.6
SREBF1-204ENST00000395756 BANF1O75531 89 aa18.81■□□□□ 0.6
SREBF1-204ENST00000395756 NUDT17P0C025 328 aa18.81■□□□□ 0.6
SREBF1-204ENST00000395756 PDGFRAP16234 1089 aa18.81■□□□□ 0.6
SREBF1-204ENST00000395756 GBP1P32455 592 aa18.81■□□□□ 0.6
SREBF1-204ENST00000395756 PPP1R2P3Q6NXS1 205 aa18.81■□□□□ 0.6
SREBF1-204ENST00000395756 TAX1BP1Q86VP1 789 aa18.81■□□□□ 0.6
SREBF1-204ENST00000395756 RFX6Q8HWS3 928 aa18.81■□□□□ 0.6
SREBF1-204ENST00000395756 LHX5Q9H2C1 402 aa18.81■□□□□ 0.6
SREBF1-204ENST00000395756 DOCK3Q8IZD9 2030 aa18.8■□□□□ 0.6
SREBF1-204ENST00000395756 GPR32O75388 356 aa18.8■□□□□ 0.6
SREBF1-204ENST00000395756 RNF8O76064 485 aa18.8■□□□□ 0.6
SREBF1-204ENST00000395756 VDRP11473 427 aa18.8■□□□□ 0.6
SREBF1-204ENST00000395756 ADORA2BP29275 332 aa18.8■□□□□ 0.6
SREBF1-204ENST00000395756 MAN1A1P33908 653 aa18.8■□□□□ 0.6
SREBF1-204ENST00000395756 MFSD10Q14728 455 aa18.8■□□□□ 0.6
SREBF1-204ENST00000395756 LRRC14Q15048 493 aa18.8■□□□□ 0.6
SREBF1-204ENST00000395756 HADHQ16836 314 aaKnown RBP18.8■□□□□ 0.6
SREBF1-204ENST00000395756 AGBL2Q5U5Z8 902 aa18.8■□□□□ 0.6
SREBF1-204ENST00000395756 PMF1Q6P1K2 205 aa18.8■□□□□ 0.6
SREBF1-204ENST00000395756 RPAINQ86UA6 219 aa18.8■□□□□ 0.6
SREBF1-204ENST00000395756 CCDC33Q8N5R6 958 aa18.8■□□□□ 0.6
SREBF1-204ENST00000395756 ACTL9Q8TC94 416 aa18.8■□□□□ 0.6
SREBF1-204ENST00000395756 EPN3Q9H201 632 aa18.8■□□□□ 0.6
SREBF1-204ENST00000395756 NGRNQ9NPE2 291 aaKnown RBP18.8■□□□□ 0.6
SREBF1-204ENST00000395756 SLC12A6Q9UHW9 1150 aa18.8■□□□□ 0.6
SREBF1-204ENST00000395756 ITGA11Q9UKX5 1188 aa18.8■□□□□ 0.6
SREBF1-204ENST00000395756 LRRC37A2A6NM11 1700 aa18.8■□□□□ 0.6
SREBF1-204ENST00000395756 ATICP31939 592 aa18.8■□□□□ 0.6
SREBF1-204ENST00000395756 OTUD4Q01804 1114 aaKnown RBP18.8■□□□□ 0.6
SREBF1-204ENST00000395756 CNGA2Q16280 664 aa18.8■□□□□ 0.6
SREBF1-204ENST00000395756 SLC27A1Q6PCB7 646 aa18.8■□□□□ 0.6
SREBF1-204ENST00000395756 NLRP14Q86W24 1093 aa18.8■□□□□ 0.6
SREBF1-204ENST00000395756 IFNLR1Q8IU57 520 aaPredicted RBP18.8■□□□□ 0.6
SREBF1-204ENST00000395756 RXFP2Q8WXD0 754 aa18.8■□□□□ 0.6
SREBF1-204ENST00000395756 HOMER3Q9NSC5 361 aa18.8■□□□□ 0.6
SREBF1-204ENST00000395756 GDF10P55107 478 aa18.79■□□□□ 0.6
SREBF1-204ENST00000395756 CCDC142Q17RM4 750 aa18.79■□□□□ 0.6
SREBF1-204ENST00000395756 FAM183BPQ6ZVS7 135 aa18.79■□□□□ 0.6
SREBF1-204ENST00000395756 ZC3H18Q86VM9 953 aaKnown RBP18.79■□□□□ 0.6
SREBF1-204ENST00000395756 RBM15Q96T37 977 aaKnown RBP eCLIP18.79■□□□□ 0.63e-7■■□□□ 12.6
SREBF1-204ENST00000395756 SLC45A1Q9Y2W3 748 aa18.79■□□□□ 0.6
SREBF1-204ENST00000395756 A8MXQ7 604 aa18.79■□□□□ 0.6
SREBF1-204ENST00000395756 CHN1P15882 459 aa18.79■□□□□ 0.6
SREBF1-204ENST00000395756 GRM5P41594 1212 aa18.79■□□□□ 0.6
SREBF1-204ENST00000395756 SLC25A11Q02978 314 aaKnown RBP18.79■□□□□ 0.6
SREBF1-204ENST00000395756 GAD2Q05329 585 aa18.79■□□□□ 0.6
SREBF1-204ENST00000395756 MAP2K5Q13163 448 aa18.79■□□□□ 0.6
SREBF1-204ENST00000395756 FASTKD3Q14CZ7 662 aaKnown RBP18.79■□□□□ 0.6
SREBF1-204ENST00000395756 NPNTQ6UXI9 565 aa18.79■□□□□ 0.6
SREBF1-204ENST00000395756 SLCO2A1Q92959 643 aa18.79■□□□□ 0.6
SREBF1-204ENST00000395756 SAYSD1Q9NPB0 183 aa18.79■□□□□ 0.6
SREBF1-204ENST00000395756 SLC5A4Q9NY91 659 aa18.79■□□□□ 0.6
SREBF1-204ENST00000395756 USP18Q9UMW8 372 aa18.79■□□□□ 0.6
SREBF1-204ENST00000395756 C2CD2Q9Y426 696 aa18.79■□□□□ 0.6
SREBF1-204ENST00000395756 NME7Q9Y5B8 376 aa18.79■□□□□ 0.6
SREBF1-204ENST00000395756 HTTP42858 3142 aa18.79■□□□□ 0.6
SREBF1-204ENST00000395756 IGFBP6P24592 240 aaPredicted RBP18.79■□□□□ 0.6
SREBF1-204ENST00000395756 LMO2P25791 158 aa18.79■□□□□ 0.6
SREBF1-204ENST00000395756 AUHQ13825 339 aaKnown RBP18.79■□□□□ 0.6
SREBF1-204ENST00000395756 NOTUMQ6P988 496 aa18.79■□□□□ 0.6
SREBF1-204ENST00000395756 RHBDF2Q6PJF5 856 aa18.79■□□□□ 0.6
SREBF1-204ENST00000395756 ZNF410Q86VK4 478 aa18.79■□□□□ 0.6
SREBF1-204ENST00000395756 COL1A2P08123 1366 aa18.78■□□□□ 0.6
SREBF1-204ENST00000395756 NRCAMQ92823 1304 aa18.78■□□□□ 0.6
SREBF1-204ENST00000395756 SLC15A5A6NIM6 579 aa18.78■□□□□ 0.6
SREBF1-204ENST00000395756 A6NJR5 290 aa18.78■□□□□ 0.6
SREBF1-204ENST00000395756 KDELR1P24390 212 aa18.78■□□□□ 0.6
SREBF1-204ENST00000395756 TAP1Q03518 808 aa18.78■□□□□ 0.6
SREBF1-204ENST00000395756 C6orf118Q5T5N4 469 aa18.78■□□□□ 0.6
SREBF1-204ENST00000395756 TRNP1Q6NT89 227 aa18.78■□□□□ 0.6
SREBF1-204ENST00000395756 CYP3A43Q9HB55 503 aa18.78■□□□□ 0.6
SREBF1-204ENST00000395756 KCNK9Q9NPC2 374 aa18.78■□□□□ 0.6
SREBF1-204ENST00000395756 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.78■□□□□ 0.6
SREBF1-204ENST00000395756 NINJ2Q9NZG7 142 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms