RNA–Protein interactions for RNA: ENST00000395205.6

BBS4-202, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best) BASIC

Gene BBS4, Length 2,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-202ENST00000395205 SF3B1O75533 1304 aaKnown RBP eCLIP10.43□□□□□ -0.74
BBS4-202ENST00000395205 SCN1AP35498 2009 aa10.43□□□□□ -0.74
BBS4-202ENST00000395205 MYO1FO00160 1098 aa10.43□□□□□ -0.74
BBS4-202ENST00000395205 SYN3O14994 580 aa10.43□□□□□ -0.74
BBS4-202ENST00000395205 MTA2O94776 668 aa10.43□□□□□ -0.74
BBS4-202ENST00000395205 GJB6O95452 261 aa10.43□□□□□ -0.74
BBS4-202ENST00000395205 DNA2P51530 1060 aa10.43□□□□□ -0.74
BBS4-202ENST00000395205 ELAVL2Q12926 359 aaKnown RBP10.43□□□□□ -0.74
BBS4-202ENST00000395205 ZNF268Q14587 947 aaPredicted RBP10.43□□□□□ -0.74
BBS4-202ENST00000395205 INTS6LQ5JSJ4 861 aaKnown RBP10.43□□□□□ -0.74
BBS4-202ENST00000395205 TEX35Q5T0J7 233 aa10.43□□□□□ -0.74
BBS4-202ENST00000395205 OR6B2Q6IFH4 312 aa10.43□□□□□ -0.74
BBS4-202ENST00000395205 PLEKHA7Q6IQ23 1121 aa10.43□□□□□ -0.74
BBS4-202ENST00000395205 FUT10Q6P4F1 479 aa10.43□□□□□ -0.74
BBS4-202ENST00000395205 DCUN1D2Q6PH85 259 aa10.43□□□□□ -0.74
BBS4-202ENST00000395205 LRRC57Q8N9N7 239 aa10.43□□□□□ -0.74
BBS4-202ENST00000395205 FEZF2Q8TBJ5 459 aa10.43□□□□□ -0.74
BBS4-202ENST00000395205 PCED1BQ96HM7 432 aa10.43□□□□□ -0.74
BBS4-202ENST00000395205 TMEM209Q96SK2 561 aa10.43□□□□□ -0.74
BBS4-202ENST00000395205 LBHD1Q9BQE6 289 aaPredicted RBP10.43□□□□□ -0.74
BBS4-202ENST00000395205 ZBED2Q9BTP6 218 aa10.43□□□□□ -0.74
BBS4-202ENST00000395205 SELENOOQ9BVL4 669 aa10.43□□□□□ -0.74
BBS4-202ENST00000395205 DUSP16Q9BY84 665 aa10.43□□□□□ -0.74
BBS4-202ENST00000395205 WDR35Q9P2L0 1181 aa10.43□□□□□ -0.74
BBS4-202ENST00000395205 AMFRQ9UKV5 643 aa10.43□□□□□ -0.74
BBS4-202ENST00000395205 HYOU1Q9Y4L1 999 aa10.43□□□□□ -0.74
BBS4-202ENST00000395205 SCN5AQ14524 2016 aa10.43□□□□□ -0.74
BBS4-202ENST00000395205 KIAA0100Q14667 2235 aaKnown RBP10.43□□□□□ -0.74
BBS4-202ENST00000395205 OAZ2O95190 189 aa10.43□□□□□ -0.74
BBS4-202ENST00000395205 FAM200BP0CF97 657 aa10.43□□□□□ -0.74
BBS4-202ENST00000395205 EPHB4P54760 987 aa10.43□□□□□ -0.74
BBS4-202ENST00000395205 PLCB3Q01970 1234 aa10.43□□□□□ -0.74
BBS4-202ENST00000395205 RPS6KA1Q15418 735 aa10.43□□□□□ -0.74
BBS4-202ENST00000395205 VARS2Q5ST30 1063 aaKnown RBP10.43□□□□□ -0.74
BBS4-202ENST00000395205 TMEM240Q5SV17 173 aa10.43□□□□□ -0.74
BBS4-202ENST00000395205 MEI1Q5TIA1 1274 aa10.43□□□□□ -0.74
BBS4-202ENST00000395205 PAQR9Q6ZVX9 377 aa10.43□□□□□ -0.74
BBS4-202ENST00000395205 SLFN11Q7Z7L1 901 aa10.43□□□□□ -0.74
BBS4-202ENST00000395205 OR10T2Q8NGX3 314 aa10.43□□□□□ -0.74
BBS4-202ENST00000395205 B3GALT6Q96L58 329 aa10.43□□□□□ -0.74
BBS4-202ENST00000395205 PACSIN2Q9UNF0 486 aaPredicted RBP10.43□□□□□ -0.74
BBS4-202ENST00000395205 ALG6Q9Y672 507 aa10.43□□□□□ -0.74
BBS4-202ENST00000395205 SAR1BQ9Y6B6 198 aa10.43□□□□□ -0.74
BBS4-202ENST00000395205 E5RJQ4 531 aa10.42□□□□□ -0.74
BBS4-202ENST00000395205 AP1G2O75843 785 aa10.42□□□□□ -0.74
BBS4-202ENST00000395205 KRT3P12035 628 aa10.42□□□□□ -0.74
BBS4-202ENST00000395205 GABRB2P47870 512 aa10.42□□□□□ -0.74
BBS4-202ENST00000395205 MAP3K7CLP57077 242 aa10.42□□□□□ -0.74
BBS4-202ENST00000395205 MAPRE1Q15691 268 aaKnown RBP10.42□□□□□ -0.74
BBS4-202ENST00000395205 CTXN3Q4LDR2 81 aa10.42□□□□□ -0.74
BBS4-202ENST00000395205 PAPD7Q5XG87 772 aaKnown RBP10.42□□□□□ -0.74
BBS4-202ENST00000395205 FAM171BQ6P995 826 aa10.42□□□□□ -0.74
BBS4-202ENST00000395205 PSRC1Q6PGN9 363 aaPredicted RBP10.42□□□□□ -0.74
BBS4-202ENST00000395205 KCNT2Q6UVM3 1135 aa10.42□□□□□ -0.74
BBS4-202ENST00000395205 TAS1R1Q7RTX1 841 aa10.42□□□□□ -0.74
BBS4-202ENST00000395205 LRRTM3Q86VH5 581 aa10.42□□□□□ -0.74
BBS4-202ENST00000395205 TMEM173Q86WV6 379 aaPredicted RBP10.42□□□□□ -0.74
BBS4-202ENST00000395205 XYLT1Q86Y38 959 aa10.42□□□□□ -0.74
BBS4-202ENST00000395205 CMTR2Q8IYT2 770 aaKnown RBP10.42□□□□□ -0.74
BBS4-202ENST00000395205 DCP1BQ8IZD4 617 aaKnown RBP10.42□□□□□ -0.74
BBS4-202ENST00000395205 C3orf20Q8ND61 904 aa10.42□□□□□ -0.74
BBS4-202ENST00000395205 STK32AQ8WU08 396 aa10.42□□□□□ -0.74
BBS4-202ENST00000395205 MYLPFQ96A32 169 aa10.42□□□□□ -0.74
BBS4-202ENST00000395205 ZNF558Q96NG5 402 aa10.42□□□□□ -0.74
BBS4-202ENST00000395205 PSMB7Q99436 277 aa10.42□□□□□ -0.74
BBS4-202ENST00000395205 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.42□□□□□ -0.745e-7■□□□□ 10.6
BBS4-202ENST00000395205 SLC4A5Q9BY07 1137 aa10.42□□□□□ -0.74
BBS4-202ENST00000395205 TRIM7Q9C029 511 aa10.42□□□□□ -0.74
BBS4-202ENST00000395205 KRT82Q9NSB4 513 aa10.42□□□□□ -0.74
BBS4-202ENST00000395205 TET1Q8NFU7 2136 aa10.42□□□□□ -0.74
BBS4-202ENST00000395205 TANC1Q9C0D5 1861 aa10.42□□□□□ -0.74
BBS4-202ENST00000395205 CCDC85CA6NKD9 419 aa10.42□□□□□ -0.74
BBS4-202ENST00000395205 XPO1O14980 1071 aaKnown RBP10.42□□□□□ -0.74
BBS4-202ENST00000395205 SRGAP2O75044 1071 aa10.42□□□□□ -0.74
BBS4-202ENST00000395205 LCP1P13796 627 aa10.42□□□□□ -0.74
BBS4-202ENST00000395205 NPR3P17342 541 aa10.42□□□□□ -0.74
BBS4-202ENST00000395205 FGFR3P22607 806 aa10.42□□□□□ -0.74
BBS4-202ENST00000395205 ARPP19P56211 112 aa10.42□□□□□ -0.74
BBS4-202ENST00000395205 RNASE9P60153 205 aaKnown RBP10.42□□□□□ -0.74
BBS4-202ENST00000395205 TAP1Q03518 808 aa10.42□□□□□ -0.74
BBS4-202ENST00000395205 TUBB2AQ13885 445 aa10.42□□□□□ -0.74
BBS4-202ENST00000395205 C11orf63Q6NUN7 778 aa10.42□□□□□ -0.74
BBS4-202ENST00000395205 TMEM110Q86TL2 294 aa10.42□□□□□ -0.74
BBS4-202ENST00000395205 NT5DC3Q86UY8 548 aa10.42□□□□□ -0.74
BBS4-202ENST00000395205 FAM35AQ86V20 835 aa10.42□□□□□ -0.74
BBS4-202ENST00000395205 SPATA2LQ8IUW3 424 aaPredicted RBP10.42□□□□□ -0.74
BBS4-202ENST00000395205 SCUBE3Q8IX30 993 aa10.42□□□□□ -0.74
BBS4-202ENST00000395205 BCL7CQ8WUZ0 217 aaPredicted RBP10.42□□□□□ -0.74
BBS4-202ENST00000395205 MCEEQ96PE7 176 aa10.42□□□□□ -0.74
BBS4-202ENST00000395205 TUBB2BQ9BVA1 445 aa10.42□□□□□ -0.74
BBS4-202ENST00000395205 TLR10Q9BXR5 811 aa10.42□□□□□ -0.74
BBS4-202ENST00000395205 TMLHEQ9NVH6 421 aa10.42□□□□□ -0.74
BBS4-202ENST00000395205 SNX12Q9UMY4 172 aa10.42□□□□□ -0.74
BBS4-202ENST00000395205 MRPL42Q9Y6G3 142 aaKnown RBP10.42□□□□□ -0.74
BBS4-202ENST00000395205 PDCD11Q14690 1871 aaKnown RBP10.41□□□□□ -0.74
BBS4-202ENST00000395205 SIGLEC16A6NMB1 481 aa10.41□□□□□ -0.74
BBS4-202ENST00000395205 H7C4K7 107 aa10.41□□□□□ -0.74
BBS4-202ENST00000395205 SPOPO43791 374 aa10.41□□□□□ -0.74
BBS4-202ENST00000395205 BEST1O76090 585 aa10.41□□□□□ -0.74
BBS4-202ENST00000395205 OR4Q2P0C623 313 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms