RNA–Protein interactions for RNA: ENST00000394997.5

HIF1A-203, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HIF1A, Length 3,922 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-203ENST00000394997 CDHR5Q9HBB8 845 aa10.8□□□□□ -0.68
HIF1A-203ENST00000394997 DNAJC17Q9NVM6 304 aaKnown RBP10.8□□□□□ -0.68
HIF1A-203ENST00000394997 GNEQ9Y223 722 aaKnown RBP10.8□□□□□ -0.68
HIF1A-203ENST00000394997 EFR3BQ9Y2G0 817 aa10.8□□□□□ -0.68
HIF1A-203ENST00000394997 MBLAC1A4D2B0 266 aaPredicted RBP10.8□□□□□ -0.68
HIF1A-203ENST00000394997 CHN1P15882 459 aa10.8□□□□□ -0.68
HIF1A-203ENST00000394997 MAGEA3P43357 314 aa10.8□□□□□ -0.68
HIF1A-203ENST00000394997 IRX1P78414 480 aaPredicted RBP10.8□□□□□ -0.68
HIF1A-203ENST00000394997 NUGGCQ68CJ6 796 aa10.8□□□□□ -0.68
HIF1A-203ENST00000394997 ARMCX2Q7L311 632 aa10.8□□□□□ -0.68
HIF1A-203ENST00000394997 RNF149Q8NC42 400 aa10.8□□□□□ -0.68
HIF1A-203ENST00000394997 TRIM11Q96F44 468 aa10.8□□□□□ -0.68
HIF1A-203ENST00000394997 PHACTR1Q9C0D0 580 aa10.8□□□□□ -0.68
HIF1A-203ENST00000394997 PTPN22Q9Y2R2 807 aa10.8□□□□□ -0.68
HIF1A-203ENST00000394997 COL4A6Q14031 1691 aa10.8□□□□□ -0.68
HIF1A-203ENST00000394997 TYROBPO43914 113 aa10.79□□□□□ -0.68
HIF1A-203ENST00000394997 CD58P19256 250 aa10.79□□□□□ -0.68
HIF1A-203ENST00000394997 ERFP50548 548 aa10.79□□□□□ -0.68
HIF1A-203ENST00000394997 CDH8P55286 799 aa10.79□□□□□ -0.68
HIF1A-203ENST00000394997 ZC3H12AQ5D1E8 599 aaKnown RBP10.79□□□□□ -0.68
HIF1A-203ENST00000394997 ANKRD22Q5VYY1 191 aa10.79□□□□□ -0.68
HIF1A-203ENST00000394997 ZNF534Q76KX8 674 aa10.79□□□□□ -0.68
HIF1A-203ENST00000394997 CDR2LQ86X02 465 aaPredicted RBP10.79□□□□□ -0.68
HIF1A-203ENST00000394997 RHOT1Q8IXI2 618 aa10.79□□□□□ -0.68
HIF1A-203ENST00000394997 ANKRD13AQ8IZ07 590 aa10.79□□□□□ -0.68
HIF1A-203ENST00000394997 ZC3H15Q8WU90 426 aaKnown RBP10.79□□□□□ -0.68
HIF1A-203ENST00000394997 SNF8Q96H20 258 aa10.79□□□□□ -0.68
HIF1A-203ENST00000394997 XPO6Q96QU8 1125 aaKnown RBP10.79□□□□□ -0.68
HIF1A-203ENST00000394997 PARVAQ9NVD7 372 aa10.79□□□□□ -0.68
HIF1A-203ENST00000394997 RASAL2Q9UJF2 1139 aa10.79□□□□□ -0.68
HIF1A-203ENST00000394997 AGTP01019 485 aa10.79□□□□□ -0.68
HIF1A-203ENST00000394997 WEE2P0C1S8 567 aa10.79□□□□□ -0.68
HIF1A-203ENST00000394997 ZBTB16Q05516 673 aa10.79□□□□□ -0.68
HIF1A-203ENST00000394997 SGSM1Q2NKQ1 1148 aa10.79□□□□□ -0.68
HIF1A-203ENST00000394997 ATF7IP2Q5U623 682 aa10.79□□□□□ -0.68
HIF1A-203ENST00000394997 CES4AQ5XG92 561 aa10.79□□□□□ -0.68
HIF1A-203ENST00000394997 KBTBD7Q8WVZ9 684 aa10.79□□□□□ -0.68
HIF1A-203ENST00000394997 ROPN1BQ9BZX4 212 aaPredicted RBP10.79□□□□□ -0.68
HIF1A-203ENST00000394997 ROPN1Q9HAT0 212 aaPredicted RBP10.79□□□□□ -0.68
HIF1A-203ENST00000394997 GBA2Q9HCG7 927 aaPredicted RBP10.79□□□□□ -0.68
HIF1A-203ENST00000394997 KLHL11Q9NVR0 708 aa10.79□□□□□ -0.68
HIF1A-203ENST00000394997 MTMR10Q9NXD2 777 aa10.79□□□□□ -0.68
HIF1A-203ENST00000394997 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.79□□□□□ -0.68
HIF1A-203ENST00000394997 FLRT1Q9NZU1 646 aa10.79□□□□□ -0.68
HIF1A-203ENST00000394997 ADAM22Q9P0K1 906 aa10.79□□□□□ -0.68
HIF1A-203ENST00000394997 G3BP2Q9UN86 482 aaKnown RBP10.79□□□□□ -0.68
HIF1A-203ENST00000394997 PCDHB4Q9Y5E5 795 aa10.79□□□□□ -0.68
HIF1A-203ENST00000394997 REV3LO60673 3130 aa10.79□□□□□ -0.68
HIF1A-203ENST00000394997 DOCK4Q8N1I0 1966 aa10.79□□□□□ -0.68
HIF1A-203ENST00000394997 TLR3O15455 904 aaKnown RBP10.79□□□□□ -0.68
HIF1A-203ENST00000394997 MAGEB2O15479 319 aa10.79□□□□□ -0.68
HIF1A-203ENST00000394997 AP1G2O75843 785 aa10.79□□□□□ -0.68
HIF1A-203ENST00000394997 ANP32DO95626 131 aa10.79□□□□□ -0.68
HIF1A-203ENST00000394997 CYP2C8P10632 490 aa10.79□□□□□ -0.68
HIF1A-203ENST00000394997 GBP1P32455 592 aa10.79□□□□□ -0.68
HIF1A-203ENST00000394997 STX2P32856 288 aa10.79□□□□□ -0.68
HIF1A-203ENST00000394997 TSNAXIP1Q2TAA8 658 aa10.79□□□□□ -0.68
HIF1A-203ENST00000394997 CYP4A22Q5TCH4 519 aa10.79□□□□□ -0.68
HIF1A-203ENST00000394997 MTHFD1LQ6UB35 978 aa10.79□□□□□ -0.68
HIF1A-203ENST00000394997 OLFML1Q6UWY5 402 aa10.79□□□□□ -0.68
HIF1A-203ENST00000394997 DEPTORQ8TB45 409 aa10.79□□□□□ -0.68
HIF1A-203ENST00000394997 CENPIQ92674 756 aaPredicted RBP10.79□□□□□ -0.68
HIF1A-203ENST00000394997 CHMP6Q96FZ7 201 aa10.79□□□□□ -0.68
HIF1A-203ENST00000394997 SH3GL3Q99963 347 aa10.79□□□□□ -0.68
HIF1A-203ENST00000394997 TRIM4Q9C037 500 aa10.79□□□□□ -0.68
HIF1A-203ENST00000394997 USP29Q9HBJ7 922 aa10.79□□□□□ -0.68
HIF1A-203ENST00000394997 TBK1Q9UHD2 729 aa10.79□□□□□ -0.68
HIF1A-203ENST00000394997 KCNG1Q9UIX4 513 aa10.79□□□□□ -0.68
HIF1A-203ENST00000394997 HAS3O00219 553 aa10.78□□□□□ -0.68
HIF1A-203ENST00000394997 DNALI1O14645 258 aaPredicted RBP10.78□□□□□ -0.68
HIF1A-203ENST00000394997 ECEL1O95672 775 aa10.78□□□□□ -0.68
HIF1A-203ENST00000394997 KRT5P13647 590 aa10.78□□□□□ -0.68
HIF1A-203ENST00000394997 SMPD1P17405 629 aa10.78□□□□□ -0.68
HIF1A-203ENST00000394997 TNNI1P19237 187 aa10.78□□□□□ -0.68
HIF1A-203ENST00000394997 MAGEA6P43360 314 aa10.78□□□□□ -0.68
HIF1A-203ENST00000394997 NRLP54845 237 aa10.78□□□□□ -0.68
HIF1A-203ENST00000394997 WDR4P57081 412 aaKnown RBP10.78□□□□□ -0.68
HIF1A-203ENST00000394997 BPIFB4P59827 614 aa10.78□□□□□ -0.68
HIF1A-203ENST00000394997 COPS2P61201 443 aa10.78□□□□□ -0.68
HIF1A-203ENST00000394997 PREPLQ4J6C6 727 aaPredicted RBP10.78□□□□□ -0.68
HIF1A-203ENST00000394997 ZNF449Q6P9G9 518 aa10.78□□□□□ -0.68
HIF1A-203ENST00000394997 USP50Q70EL3 339 aaPredicted RBP10.78□□□□□ -0.68
HIF1A-203ENST00000394997 EEPD1Q7L9B9 569 aa10.78□□□□□ -0.68
HIF1A-203ENST00000394997 ATL2Q8NHH9 583 aa10.78□□□□□ -0.68
HIF1A-203ENST00000394997 FAM167AQ96KS9 214 aa10.78□□□□□ -0.68
HIF1A-203ENST00000394997 MCEEQ96PE7 176 aa10.78□□□□□ -0.68
HIF1A-203ENST00000394997 GORASP1Q9BQQ3 440 aa10.78□□□□□ -0.68
HIF1A-203ENST00000394997 MROH8Q9H579 483 aa10.78□□□□□ -0.68
HIF1A-203ENST00000394997 NKIRAS1Q9NYS0 192 aa10.78□□□□□ -0.68
HIF1A-203ENST00000394997 GBF1Q92538 1859 aa10.78□□□□□ -0.68
HIF1A-203ENST00000394997 PECAM1P16284 738 aaPredicted RBP10.78□□□□□ -0.68
HIF1A-203ENST00000394997 MARK3P27448 753 aa10.78□□□□□ -0.68
HIF1A-203ENST00000394997 GJC1P36383 396 aa10.78□□□□□ -0.68
HIF1A-203ENST00000394997 CALCOCO2Q13137 446 aa10.78□□□□□ -0.68
HIF1A-203ENST00000394997 EAPPQ56P03 285 aaPredicted RBP10.78□□□□□ -0.68
HIF1A-203ENST00000394997 ZBTB33Q86T24 672 aa10.78□□□□□ -0.68
HIF1A-203ENST00000394997 IGDCC3Q8IVU1 814 aa10.78□□□□□ -0.68
HIF1A-203ENST00000394997 SPDYE1Q8NFV5 336 aaPredicted RBP10.78□□□□□ -0.68
HIF1A-203ENST00000394997 IMPG2Q9BZV3 1241 aa10.78□□□□□ -0.68
HIF1A-203ENST00000394997 SLC5A4Q9NY91 659 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms