RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 OLFM3Q96PB7 478 aa10.79□□□□□ -0.68
COL4A6-203ENST00000394872 MAN1C1Q9NR34 630 aa10.79□□□□□ -0.68
COL4A6-203ENST00000394872 SMARCAL1Q9NZC9 954 aa10.79□□□□□ -0.68
COL4A6-203ENST00000394872 GRID1Q9ULK0 1009 aa10.79□□□□□ -0.68
COL4A6-203ENST00000394872 DIP2AQ14689 1571 aa10.79□□□□□ -0.68
COL4A6-203ENST00000394872 AIM2O14862 343 aa10.79□□□□□ -0.68
COL4A6-203ENST00000394872 MAP3K13O43283 966 aa10.79□□□□□ -0.68
COL4A6-203ENST00000394872 TRIM16O95361 564 aa10.79□□□□□ -0.68
COL4A6-203ENST00000394872 KRT8P05787 483 aa10.79□□□□□ -0.68
COL4A6-203ENST00000394872 VDRP11473 427 aa10.79□□□□□ -0.68
COL4A6-203ENST00000394872 GYS1P13807 737 aa10.79□□□□□ -0.68
COL4A6-203ENST00000394872 VCLP18206 1134 aa10.79□□□□□ -0.68
COL4A6-203ENST00000394872 ACTN3Q08043 901 aaPredicted RBP10.79□□□□□ -0.68
COL4A6-203ENST00000394872 DNAL1Q4LDG9 190 aa10.79□□□□□ -0.68
COL4A6-203ENST00000394872 BOLA3Q53S33 107 aa10.79□□□□□ -0.68
COL4A6-203ENST00000394872 MROH9Q5TGP6 573 aa10.79□□□□□ -0.68
COL4A6-203ENST00000394872 E4F1Q66K89 784 aaPredicted RBP10.79□□□□□ -0.68
COL4A6-203ENST00000394872 LONP2Q86WA8 852 aa10.79□□□□□ -0.68
COL4A6-203ENST00000394872 GID8Q9NWU2 228 aa10.79□□□□□ -0.68
COL4A6-203ENST00000394872 POLR1AO95602 1720 aaPredicted RBP10.79□□□□□ -0.68
COL4A6-203ENST00000394872 SYNCRIPO60506 623 aaKnown RBP10.79□□□□□ -0.68
COL4A6-203ENST00000394872 ENDOD1O94919 500 aa10.79□□□□□ -0.68
COL4A6-203ENST00000394872 SGPL1O95470 568 aa10.79□□□□□ -0.68
COL4A6-203ENST00000394872 CKBP12277 381 aa10.79□□□□□ -0.68
COL4A6-203ENST00000394872 EFEMP1Q12805 493 aa10.79□□□□□ -0.68
COL4A6-203ENST00000394872 CLEC16AQ2KHT3 1053 aa10.79□□□□□ -0.68
COL4A6-203ENST00000394872 TIGD7Q6NT04 549 aaPredicted RBP10.79□□□□□ -0.68
COL4A6-203ENST00000394872 EFL1Q7Z2Z2 1120 aaKnown RBP10.79□□□□□ -0.68
COL4A6-203ENST00000394872 IRX2Q9BZI1 471 aaPredicted RBP10.79□□□□□ -0.68
COL4A6-203ENST00000394872 RNF112Q9ULX5 631 aa10.79□□□□□ -0.68
COL4A6-203ENST00000394872 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.79□□□□□ -0.68
COL4A6-203ENST00000394872 KPNA6O60684 536 aa10.78□□□□□ -0.68
COL4A6-203ENST00000394872 TRIM65Q6PJ69 517 aa10.78□□□□□ -0.68
COL4A6-203ENST00000394872 C11orf74Q86VG3 221 aa10.78□□□□□ -0.68
COL4A6-203ENST00000394872 CYGBQ8WWM9 190 aa10.78□□□□□ -0.68
COL4A6-203ENST00000394872 STAMBPL1Q96FJ0 436 aa10.78□□□□□ -0.68
COL4A6-203ENST00000394872 KLF6Q99612 283 aaPredicted RBP10.78□□□□□ -0.68
COL4A6-203ENST00000394872 TSEN34Q9BSV6 310 aaKnown RBP10.78□□□□□ -0.68
COL4A6-203ENST00000394872 RBM12Q9NTZ6 932 aaKnown RBP10.78□□□□□ -0.68
COL4A6-203ENST00000394872 PPP2R3BQ9Y5P8 575 aa10.78□□□□□ -0.68
COL4A6-203ENST00000394872 CASTOR2A6NHX0 329 aa10.78□□□□□ -0.68
COL4A6-203ENST00000394872 RAD51CO43502 376 aa10.78□□□□□ -0.68
COL4A6-203ENST00000394872 MED24O75448 989 aa10.78□□□□□ -0.68
COL4A6-203ENST00000394872 FAM107AO95990 144 aa10.78□□□□□ -0.68
COL4A6-203ENST00000394872 FAM83EQ2M2I3 478 aa10.78□□□□□ -0.68
COL4A6-203ENST00000394872 NBPF12Q5TAG4 269 aaPredicted RBP10.78□□□□□ -0.68
COL4A6-203ENST00000394872 LRRC8BQ6P9F7 803 aa10.78□□□□□ -0.68
COL4A6-203ENST00000394872 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.78□□□□□ -0.68
COL4A6-203ENST00000394872 WNK4Q96J92 1243 aa10.78□□□□□ -0.68
COL4A6-203ENST00000394872 EMILIN2Q9BXX0 1053 aa10.78□□□□□ -0.68
COL4A6-203ENST00000394872 FOXP3Q9BZS1 431 aa10.78□□□□□ -0.68
COL4A6-203ENST00000394872 EVPLLA8MZ36 301 aa10.78□□□□□ -0.68
COL4A6-203ENST00000394872 IMPDH2P12268 514 aa10.78□□□□□ -0.68
COL4A6-203ENST00000394872 MYL4P12829 197 aa10.78□□□□□ -0.68
COL4A6-203ENST00000394872 TGM2P21980 687 aa10.78□□□□□ -0.68
COL4A6-203ENST00000394872 TNIP2Q8NFZ5 429 aa10.78□□□□□ -0.68
COL4A6-203ENST00000394872 PAWRQ96IZ0 340 aaKnown RBP10.78□□□□□ -0.68
COL4A6-203ENST00000394872 SPACA6W5XKT8 324 aa10.78□□□□□ -0.68
COL4A6-203ENST00000394872 PDHXO00330 501 aa10.78□□□□□ -0.68
COL4A6-203ENST00000394872 KLHL2O95198 593 aa10.78□□□□□ -0.68
COL4A6-203ENST00000394872 KCNJ1P48048 391 aa10.78□□□□□ -0.68
COL4A6-203ENST00000394872 SERPINB10P48595 397 aa10.78□□□□□ -0.68
COL4A6-203ENST00000394872 CTCFP49711 727 aaPredicted RBP10.78□□□□□ -0.68
COL4A6-203ENST00000394872 FAXCQ5TGI0 409 aa10.78□□□□□ -0.68
COL4A6-203ENST00000394872 PCNX4Q63HM2 1172 aa10.78□□□□□ -0.68
COL4A6-203ENST00000394872 LVRNQ6Q4G3 990 aa10.78□□□□□ -0.68
COL4A6-203ENST00000394872 CMTM5Q96DZ9 223 aa10.78□□□□□ -0.68
COL4A6-203ENST00000394872 YIPF3Q9GZM5 350 aa10.78□□□□□ -0.68
COL4A6-203ENST00000394872 EPN3Q9H201 632 aa10.78□□□□□ -0.68
COL4A6-203ENST00000394872 VPS33BQ9H267 617 aa10.78□□□□□ -0.68
COL4A6-203ENST00000394872 KCTD10Q9H3F6 313 aa10.78□□□□□ -0.68
COL4A6-203ENST00000394872 RAD18Q9NS91 495 aa10.78□□□□□ -0.68
COL4A6-203ENST00000394872 AAR2Q9Y312 384 aaKnown RBP10.78□□□□□ -0.68
COL4A6-203ENST00000394872 SLC12A8A0AV02 714 aa10.78□□□□□ -0.68
COL4A6-203ENST00000394872 MYO1CO00159 1063 aa10.78□□□□□ -0.68
COL4A6-203ENST00000394872 DGKIO75912 1065 aa10.78□□□□□ -0.68
COL4A6-203ENST00000394872 RPLP2P05387 115 aaKnown RBP10.78□□□□□ -0.68
COL4A6-203ENST00000394872 TCN1P20061 433 aaPredicted RBP10.78□□□□□ -0.68
COL4A6-203ENST00000394872 COILP38432 576 aaPredicted RBP10.78□□□□□ -0.68
COL4A6-203ENST00000394872 MRNIPQ6NTE8 343 aa10.78□□□□□ -0.68
COL4A6-203ENST00000394872 SLFN11Q7Z7L1 901 aa10.78□□□□□ -0.68
COL4A6-203ENST00000394872 PNKPQ96T60 521 aa10.78□□□□□ -0.68
COL4A6-203ENST00000394872 CELF4Q9BZC1 486 aaKnown RBP10.78□□□□□ -0.68
COL4A6-203ENST00000394872 NKRFO15226 690 aaKnown RBP eCLIP10.77□□□□□ -0.68
COL4A6-203ENST00000394872 ALDH2P05091 517 aa10.77□□□□□ -0.68
COL4A6-203ENST00000394872 WEE1P30291 646 aa10.77□□□□□ -0.68
COL4A6-203ENST00000394872 LHX1P48742 406 aa10.77□□□□□ -0.68
COL4A6-203ENST00000394872 NFIAQ12857 509 aa10.77□□□□□ -0.68
COL4A6-203ENST00000394872 CAMK2GQ13555 558 aaPredicted RBP10.77□□□□□ -0.68
COL4A6-203ENST00000394872 NFKBIZQ9BYH8 718 aa10.77□□□□□ -0.68
COL4A6-203ENST00000394872 COPS7BQ9H9Q2 264 aaPredicted RBP10.77□□□□□ -0.68
COL4A6-203ENST00000394872 VPS28Q9UK41 221 aa10.77□□□□□ -0.68
COL4A6-203ENST00000394872 PSTPIP1O43586 416 aa10.77□□□□□ -0.69
COL4A6-203ENST00000394872 NPTX2P47972 431 aa10.77□□□□□ -0.69
COL4A6-203ENST00000394872 NEK2P51955 445 aa10.77□□□□□ -0.69
COL4A6-203ENST00000394872 BCAT1P54687 386 aa10.77□□□□□ -0.69
COL4A6-203ENST00000394872 UBE3AQ05086 875 aa10.77□□□□□ -0.69
COL4A6-203ENST00000394872 GRB10Q13322 594 aa10.77□□□□□ -0.69
COL4A6-203ENST00000394872 CHI3L2Q15782 390 aa10.77□□□□□ -0.69
COL4A6-203ENST00000394872 ZNF284Q2VY69 593 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms