RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 SLC45A4Q5BKX6 768 aa12.19□□□□□ -0.46
UBE2D3-209ENST00000394804 DALRD3Q5D0E6 543 aaKnown RBP12.19□□□□□ -0.46
UBE2D3-209ENST00000394804 VSIG10LQ86VR7 867 aa12.19□□□□□ -0.46
UBE2D3-209ENST00000394804 FITM2Q8N6M3 262 aa12.19□□□□□ -0.46
UBE2D3-209ENST00000394804 LMO3Q8TAP4 145 aa12.19□□□□□ -0.46
UBE2D3-209ENST00000394804 STK32AQ8WU08 396 aa12.19□□□□□ -0.46
UBE2D3-209ENST00000394804 RNF34Q969K3 372 aa12.19□□□□□ -0.46
UBE2D3-209ENST00000394804 E2F7Q96AV8 911 aa12.19□□□□□ -0.46
UBE2D3-209ENST00000394804 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.19□□□□□ -0.46
UBE2D3-209ENST00000394804 MYH4Q9Y623 1939 aa12.19□□□□□ -0.46
UBE2D3-209ENST00000394804 GPD1P21695 349 aa12.19□□□□□ -0.46
UBE2D3-209ENST00000394804 CALB2P22676 271 aa12.19□□□□□ -0.46
UBE2D3-209ENST00000394804 IFRD2Q12894 506 aaPredicted RBP12.19□□□□□ -0.46
UBE2D3-209ENST00000394804 STX3Q13277 289 aa12.19□□□□□ -0.46
UBE2D3-209ENST00000394804 NXNQ6DKJ4 435 aa12.19□□□□□ -0.46
UBE2D3-209ENST00000394804 VSTM1Q6UX27 236 aa12.19□□□□□ -0.46
UBE2D3-209ENST00000394804 ARID3BQ8IVW6 561 aaPredicted RBP12.19□□□□□ -0.46
UBE2D3-209ENST00000394804 CCDC60Q8IWA6 550 aaPredicted RBP12.19□□□□□ -0.46
UBE2D3-209ENST00000394804 AFAP1L2Q8N4X5 818 aa12.19□□□□□ -0.46
UBE2D3-209ENST00000394804 DNAAF3Q8N9W5 541 aa12.19□□□□□ -0.46
UBE2D3-209ENST00000394804 DHX35Q9H5Z1 703 aaKnown RBP12.19□□□□□ -0.46
UBE2D3-209ENST00000394804 SMYD3Q9H7B4 428 aa12.19□□□□□ -0.46
UBE2D3-209ENST00000394804 SAR1AQ9NR31 198 aa12.19□□□□□ -0.46
UBE2D3-209ENST00000394804 PCMTD2Q9NV79 361 aa12.19□□□□□ -0.46
UBE2D3-209ENST00000394804 MROH7Q68CQ1 1323 aa12.19□□□□□ -0.46
UBE2D3-209ENST00000394804 MYH7BA7E2Y1 1941 aa12.19□□□□□ -0.46
UBE2D3-209ENST00000394804 FOXO6A8MYZ6 492 aa12.19□□□□□ -0.46
UBE2D3-209ENST00000394804 PIK3R2O00459 728 aa12.19□□□□□ -0.46
UBE2D3-209ENST00000394804 SERPINB9P50453 376 aa12.19□□□□□ -0.46
UBE2D3-209ENST00000394804 RTP1P59025 263 aa12.19□□□□□ -0.46
UBE2D3-209ENST00000394804 RPL7AP62424 266 aaKnown RBP12.19□□□□□ -0.46
UBE2D3-209ENST00000394804 ZNF268Q14587 947 aaPredicted RBP12.19□□□□□ -0.46
UBE2D3-209ENST00000394804 MDH1BQ5I0G3 518 aa12.19□□□□□ -0.46
UBE2D3-209ENST00000394804 ATF7IP2Q5U623 682 aa12.19□□□□□ -0.46
UBE2D3-209ENST00000394804 TMEM154Q6P9G4 183 aa12.19□□□□□ -0.46
UBE2D3-209ENST00000394804 BRSK2Q8IWQ3 736 aa12.19□□□□□ -0.46
UBE2D3-209ENST00000394804 EMC1Q8N766 993 aa12.19□□□□□ -0.46
UBE2D3-209ENST00000394804 NLRP7Q8WX94 980 aa12.19□□□□□ -0.46
UBE2D3-209ENST00000394804 SCYL1Q96KG9 808 aa12.19□□□□□ -0.46
UBE2D3-209ENST00000394804 COL20A1Q9P218 1284 aa12.19□□□□□ -0.46
UBE2D3-209ENST00000394804 ATRNL1Q5VV63 1379 aa12.19□□□□□ -0.46
UBE2D3-209ENST00000394804 H3BRJ5 948 aa12.19□□□□□ -0.46
UBE2D3-209ENST00000394804 VWA5AO00534 786 aa12.19□□□□□ -0.46
UBE2D3-209ENST00000394804 TBC1D12O60347 775 aa12.19□□□□□ -0.46
UBE2D3-209ENST00000394804 CCNE2O96020 404 aa12.19□□□□□ -0.46
UBE2D3-209ENST00000394804 ZFXP17010 805 aaPredicted RBP12.19□□□□□ -0.46
UBE2D3-209ENST00000394804 CPA2P48052 419 aa12.19□□□□□ -0.46
UBE2D3-209ENST00000394804 EPHB1P54762 984 aa12.19□□□□□ -0.46
UBE2D3-209ENST00000394804 ALDH18A1P54886 795 aaKnown RBP12.19□□□□□ -0.46
UBE2D3-209ENST00000394804 ASPHQ12797 758 aa12.19□□□□□ -0.46
UBE2D3-209ENST00000394804 ACCSLQ4AC99 568 aa12.19□□□□□ -0.46
UBE2D3-209ENST00000394804 PAF1Q8N7H5 531 aa12.19□□□□□ -0.46
UBE2D3-209ENST00000394804 OR6B3Q8NGW1 331 aa12.19□□□□□ -0.46
UBE2D3-209ENST00000394804 RMDN2Q96LZ7 410 aa12.19□□□□□ -0.46
UBE2D3-209ENST00000394804 ZFATQ9P243 1243 aa12.19□□□□□ -0.46
UBE2D3-209ENST00000394804 E7ENQ6 273 aa12.18□□□□□ -0.46
UBE2D3-209ENST00000394804 IL18RAPO95256 599 aa12.18□□□□□ -0.46
UBE2D3-209ENST00000394804 MYL2P10916 166 aa12.18□□□□□ -0.46
UBE2D3-209ENST00000394804 BACE1P56817 501 aa12.18□□□□□ -0.46
UBE2D3-209ENST00000394804 TGFB2P61812 414 aa12.18□□□□□ -0.46
UBE2D3-209ENST00000394804 MON1BQ7L1V2 547 aa12.18□□□□□ -0.46
UBE2D3-209ENST00000394804 ECHDC2Q86YB7 292 aa12.18□□□□□ -0.46
UBE2D3-209ENST00000394804 LRRC71Q8N4P6 559 aa12.18□□□□□ -0.46
UBE2D3-209ENST00000394804 TMEM120AQ9BXJ8 343 aa12.18□□□□□ -0.46
UBE2D3-209ENST00000394804 VCX3AQ9NNX9 186 aa12.18□□□□□ -0.46
UBE2D3-209ENST00000394804 MID2Q9UJV3 735 aa12.18□□□□□ -0.46
UBE2D3-209ENST00000394804 TTLL3Q9Y4R7 772 aa12.18□□□□□ -0.46
UBE2D3-209ENST00000394804 KLRG2A4D1S0 409 aaPredicted RBP12.18□□□□□ -0.46
UBE2D3-209ENST00000394804 ALOX15BO15296 676 aa12.18□□□□□ -0.46
UBE2D3-209ENST00000394804 EDF1O60869 148 aaKnown RBP12.18□□□□□ -0.46
UBE2D3-209ENST00000394804 MX2P20592 715 aa12.18□□□□□ -0.46
UBE2D3-209ENST00000394804 ADSSP30520 456 aa12.18□□□□□ -0.46
UBE2D3-209ENST00000394804 CCDC15Q0P6D6 951 aa12.18□□□□□ -0.46
UBE2D3-209ENST00000394804 MAP7Q14244 749 aa12.18□□□□□ -0.46
UBE2D3-209ENST00000394804 PLEKHA7Q6IQ23 1121 aa12.18□□□□□ -0.46
UBE2D3-209ENST00000394804 ST13P4Q8IZP2 240 aaPredicted RBP12.18□□□□□ -0.46
UBE2D3-209ENST00000394804 NDUFAF2Q8N183 169 aa12.18□□□□□ -0.46
UBE2D3-209ENST00000394804 PRPF31Q8WWY3 499 aaKnown RBP12.18□□□□□ -0.46
UBE2D3-209ENST00000394804 TBC1D10AQ9BXI6 508 aa12.18□□□□□ -0.46
UBE2D3-209ENST00000394804 TXLNGYQ9BZA5 131 aa12.18□□□□□ -0.46
UBE2D3-209ENST00000394804 AGAP1Q9UPQ3 857 aa12.18□□□□□ -0.46
UBE2D3-209ENST00000394804 NUB1Q9Y5A7 615 aa12.18□□□□□ -0.46
UBE2D3-209ENST00000394804 MYH11P35749 1972 aa12.18□□□□□ -0.46
UBE2D3-209ENST00000394804 ENO4A6NNW6 628 aa12.18□□□□□ -0.46
UBE2D3-209ENST00000394804 GRAP2O75791 330 aa12.18□□□□□ -0.46
UBE2D3-209ENST00000394804 ITGAVP06756 1048 aa12.18□□□□□ -0.46
UBE2D3-209ENST00000394804 ALADP13716 330 aa12.18□□□□□ -0.46
UBE2D3-209ENST00000394804 SAT1P21673 171 aa12.18□□□□□ -0.46
UBE2D3-209ENST00000394804 EIF4BP23588 611 aaKnown RBP12.18□□□□□ -0.46
UBE2D3-209ENST00000394804 SLC12A2P55011 1212 aa12.18□□□□□ -0.46
UBE2D3-209ENST00000394804 CHI3L2Q15782 390 aa12.18□□□□□ -0.46
UBE2D3-209ENST00000394804 SLC26A11Q86WA9 606 aa12.18□□□□□ -0.46
UBE2D3-209ENST00000394804 HIPK4Q8NE63 616 aa12.18□□□□□ -0.46
UBE2D3-209ENST00000394804 BSNDQ8WZ55 320 aa12.18□□□□□ -0.46
UBE2D3-209ENST00000394804 CD101Q93033 1021 aa12.18□□□□□ -0.46
UBE2D3-209ENST00000394804 MTBPQ96DY7 904 aa12.18□□□□□ -0.46
UBE2D3-209ENST00000394804 FIZ1Q96SL8 496 aa12.18□□□□□ -0.46
UBE2D3-209ENST00000394804 THTPAQ9BU02 230 aa12.18□□□□□ -0.46
UBE2D3-209ENST00000394804 VPS11Q9H270 941 aa12.18□□□□□ -0.46
UBE2D3-209ENST00000394804 SNX25Q9H3E2 840 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms