RNA–Protein interactions for RNA: ENST00000394181.6

CLDND1-203, Transcript of claudin domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CLDND1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-203ENST00000394181 NIPA2Q8N8Q9 360 aa20.08■□□□□ 0.8
CLDND1-203ENST00000394181 SLC2A14Q8TDB8 520 aa20.08■□□□□ 0.8
CLDND1-203ENST00000394181 SENP8Q96LD8 212 aa20.08■□□□□ 0.8
CLDND1-203ENST00000394181 DPH5Q9H2P9 285 aa20.08■□□□□ 0.8
CLDND1-203ENST00000394181 SLC38A7Q9NVC3 462 aa20.08■□□□□ 0.8
CLDND1-203ENST00000394181 WDR35Q9P2L0 1181 aa20.08■□□□□ 0.8
CLDND1-203ENST00000394181 INPP5FQ9Y2H2 1132 aa20.08■□□□□ 0.8
CLDND1-203ENST00000394181 I3L4J1 428 aa20.07■□□□□ 0.8
CLDND1-203ENST00000394181 KRT10P13645 584 aa20.07■□□□□ 0.8
CLDND1-203ENST00000394181 SNX1Q13596 522 aa20.07■□□□□ 0.8
CLDND1-203ENST00000394181 CLUL1Q15846 466 aa20.07■□□□□ 0.8
CLDND1-203ENST00000394181 PAN2Q504Q3 1202 aaKnown RBP20.07■□□□□ 0.8
CLDND1-203ENST00000394181 TOP6BLQ8N6T0 577 aa20.07■□□□□ 0.8
CLDND1-203ENST00000394181 RAPGEF5Q92565 580 aa20.07■□□□□ 0.8
CLDND1-203ENST00000394181 TRAIPQ9BWF2 469 aa20.07■□□□□ 0.8
CLDND1-203ENST00000394181 RSAD1Q9HA92 442 aa20.07■□□□□ 0.8
CLDND1-203ENST00000394181 CHST7Q9NS84 486 aa20.07■□□□□ 0.8
CLDND1-203ENST00000394181 CLDN5O00501 218 aa20.07■□□□□ 0.8
CLDND1-203ENST00000394181 LRCH4O75427 683 aa20.07■□□□□ 0.8
CLDND1-203ENST00000394181 WARSP23381 471 aaKnown RBP20.07■□□□□ 0.8
CLDND1-203ENST00000394181 STILQ15468 1287 aa20.07■□□□□ 0.8
CLDND1-203ENST00000394181 CYP1B1Q16678 543 aa20.07■□□□□ 0.8
CLDND1-203ENST00000394181 KCNT1Q5JUK3 1230 aa20.07■□□□□ 0.8
CLDND1-203ENST00000394181 CCDC137Q6PK04 289 aaKnown RBP20.07■□□□□ 0.8
CLDND1-203ENST00000394181 CLEC4CQ8WTT0 213 aa20.07■□□□□ 0.8
CLDND1-203ENST00000394181 SLC4A5Q9BY07 1137 aa20.07■□□□□ 0.8
CLDND1-203ENST00000394181 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.07■□□□□ 0.8
CLDND1-203ENST00000394181 A0A0U1RQG5 324 aaPredicted RBP20.06■□□□□ 0.8
CLDND1-203ENST00000394181 HSPA6P17066 643 aa20.06■□□□□ 0.8
CLDND1-203ENST00000394181 COILP38432 576 aaPredicted RBP20.06■□□□□ 0.8
CLDND1-203ENST00000394181 EPHB4P54760 987 aa20.06■□□□□ 0.8
CLDND1-203ENST00000394181 UPP1Q16831 310 aa20.06■□□□□ 0.8
CLDND1-203ENST00000394181 SMTNL2Q2TAL5 461 aa20.06■□□□□ 0.8
CLDND1-203ENST00000394181 ZFYVE27Q5T4F4 411 aa20.06■□□□□ 0.8
CLDND1-203ENST00000394181 MFSD7Q6UXD7 560 aa20.06■□□□□ 0.8
CLDND1-203ENST00000394181 JAMLQ86YT9 394 aa20.06■□□□□ 0.8
CLDND1-203ENST00000394181 KRT222Q8N1A0 295 aa20.06■□□□□ 0.8
CLDND1-203ENST00000394181 TSEN2Q8NCE0 465 aaKnown RBP20.06■□□□□ 0.8
CLDND1-203ENST00000394181 EXD1Q8NHP7 514 aa20.06■□□□□ 0.8
CLDND1-203ENST00000394181 IPO4Q8TEX9 1081 aaKnown RBP20.06■□□□□ 0.8
CLDND1-203ENST00000394181 KHSRPQ92945 711 aaKnown RBP eCLIP20.06■□□□□ 0.82e-6■■■□□ 15
CLDND1-203ENST00000394181 MIS12Q9H081 205 aa20.06■□□□□ 0.8
CLDND1-203ENST00000394181 ZWILCHQ9H900 591 aa20.06■□□□□ 0.8
CLDND1-203ENST00000394181 HESX1Q9UBX0 185 aa20.06■□□□□ 0.8
CLDND1-203ENST00000394181 MTUS1Q9ULD2 1270 aa20.06■□□□□ 0.8
CLDND1-203ENST00000394181 HPCAL4Q9UM19 191 aa20.06■□□□□ 0.8
CLDND1-203ENST00000394181 PTPN22Q9Y2R2 807 aa20.06■□□□□ 0.8
CLDND1-203ENST00000394181 F8W810 466 aa20.05■□□□□ 0.8
CLDND1-203ENST00000394181 ARVCFO00192 962 aa20.05■□□□□ 0.8
CLDND1-203ENST00000394181 PAPSS1O43252 624 aaPredicted RBP20.05■□□□□ 0.8
CLDND1-203ENST00000394181 CHRNA3P32297 505 aa20.05■□□□□ 0.8
CLDND1-203ENST00000394181 FLT3P36888 993 aa20.05■□□□□ 0.8
CLDND1-203ENST00000394181 SLC25A11Q02978 314 aaKnown RBP20.05■□□□□ 0.8
CLDND1-203ENST00000394181 KLF1Q13351 362 aaPredicted RBP20.05■□□□□ 0.8
CLDND1-203ENST00000394181 MTFR1Q15390 333 aa20.05■□□□□ 0.8
CLDND1-203ENST00000394181 OLFML1Q6UWY5 402 aa20.05■□□□□ 0.8
CLDND1-203ENST00000394181 TMEM110Q86TL2 294 aa20.05■□□□□ 0.8
CLDND1-203ENST00000394181 ECHDC2Q86YB7 292 aa20.05■□□□□ 0.8
CLDND1-203ENST00000394181 ANKRD52Q8NB46 1076 aa20.05■□□□□ 0.8
CLDND1-203ENST00000394181 B3GALNT2Q8NCR0 500 aa20.05■□□□□ 0.8
CLDND1-203ENST00000394181 LINC01599Q8WXQ3 324 aa20.05■□□□□ 0.8
CLDND1-203ENST00000394181 SLITRK1Q96PX8 696 aa20.05■□□□□ 0.8
CLDND1-203ENST00000394181 OSBPL8Q9BZF1 889 aa20.05■□□□□ 0.8
CLDND1-203ENST00000394181 PCSK1NQ9UHG2 260 aa20.05■□□□□ 0.8
CLDND1-203ENST00000394181 GABRDO14764 452 aa20.05■□□□□ 0.8
CLDND1-203ENST00000394181 KRT1P04264 644 aa20.05■□□□□ 0.8
CLDND1-203ENST00000394181 RAB27AP51159 221 aa20.05■□□□□ 0.8
CLDND1-203ENST00000394181 RABGGTBP53611 331 aa20.05■□□□□ 0.8
CLDND1-203ENST00000394181 SMC1AQ14683 1233 aaKnown RBP20.05■□□□□ 0.8
CLDND1-203ENST00000394181 C15orf59Q2T9L4 293 aaPredicted RBP20.05■□□□□ 0.8
CLDND1-203ENST00000394181 KAZNQ674X7 775 aa20.05■□□□□ 0.8
CLDND1-203ENST00000394181 ZNF598Q86UK7 904 aaKnown RBP20.05■□□□□ 0.8
CLDND1-203ENST00000394181 HASPINQ8TF76 798 aa20.05■□□□□ 0.8
CLDND1-203ENST00000394181 PLVAPQ9BX97 442 aa20.05■□□□□ 0.8
CLDND1-203ENST00000394181 UBXN6Q9BZV1 441 aa20.05■□□□□ 0.8
CLDND1-203ENST00000394181 PCYOX1Q9UHG3 505 aa20.05■□□□□ 0.8
CLDND1-203ENST00000394181 PHF24Q9UPV7 400 aa20.05■□□□□ 0.8
CLDND1-203ENST00000394181 H3BQF6 201 aa20.04■□□□□ 0.8
CLDND1-203ENST00000394181 PTPN1P18031 435 aaKnown RBP20.04■□□□□ 0.8
CLDND1-203ENST00000394181 HLTFQ14527 1009 aaKnown RBP eCLIP20.04■□□□□ 0.8
CLDND1-203ENST00000394181 TIGD5Q53EQ6 642 aa20.04■□□□□ 0.8
CLDND1-203ENST00000394181 PAQR9Q6ZVX9 377 aa20.04■□□□□ 0.8
CLDND1-203ENST00000394181 FUKQ8N0W3 1084 aa20.04■□□□□ 0.8
CLDND1-203ENST00000394181 FNIP1Q8TF40 1166 aa20.04■□□□□ 0.8
CLDND1-203ENST00000394181 RXFP2Q8WXD0 754 aa20.04■□□□□ 0.8
CLDND1-203ENST00000394181 SEC14L1Q92503 715 aa20.04■□□□□ 0.8
CLDND1-203ENST00000394181 ERP44Q9BS26 406 aa20.04■□□□□ 0.8
CLDND1-203ENST00000394181 LRRC19Q9H756 370 aa20.04■□□□□ 0.8
CLDND1-203ENST00000394181 UTP11Q9Y3A2 253 aaKnown RBP20.04■□□□□ 0.8
CLDND1-203ENST00000394181 C2CD4BA6NLJ0 364 aa20.04■□□□□ 0.8
CLDND1-203ENST00000394181 BEST1O76090 585 aa20.04■□□□□ 0.8
CLDND1-203ENST00000394181 LRRC38Q5VT99 294 aa20.04■□□□□ 0.8
CLDND1-203ENST00000394181 DUPD1Q68J44 220 aa20.04■□□□□ 0.8
CLDND1-203ENST00000394181 EMBQ6PCB8 327 aa20.04■□□□□ 0.8
CLDND1-203ENST00000394181 CD300LGQ6UXG3 332 aa20.04■□□□□ 0.8
CLDND1-203ENST00000394181 CCDC105Q8IYK2 499 aa20.04■□□□□ 0.8
CLDND1-203ENST00000394181 DDX43Q9NXZ2 648 aaKnown RBP20.04■□□□□ 0.8
CLDND1-203ENST00000394181 B4GALT3O60512 393 aa20.03■□□□□ 0.8
CLDND1-203ENST00000394181 LCP1P13796 627 aa20.03■□□□□ 0.8
CLDND1-203ENST00000394181 PDGFRAP16234 1089 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms