RNA–Protein interactions for RNA: ENST00000394154.2

VTI1BP2-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 2, humanhuman

BASIC

Gene VTI1BP2, Length 696 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP2-201ENST00000394154 SOX9P48436 509 aa11.88□□□□□ -0.51
VTI1BP2-201ENST00000394154 CYP2J2P51589 502 aa11.88□□□□□ -0.51
VTI1BP2-201ENST00000394154 MARSP56192 900 aaKnown RBP11.88□□□□□ -0.51
VTI1BP2-201ENST00000394154 PPP2R3AQ06190 1150 aa11.88□□□□□ -0.51
VTI1BP2-201ENST00000394154 PCBP1Q15365 356 aaKnown RBP eCLIP11.88□□□□□ -0.51
VTI1BP2-201ENST00000394154 MAN2A1Q16706 1144 aa11.88□□□□□ -0.51
VTI1BP2-201ENST00000394154 UAP1L1Q3KQV9 507 aa11.88□□□□□ -0.51
VTI1BP2-201ENST00000394154 CEP135Q66GS9 1140 aa11.88□□□□□ -0.51
VTI1BP2-201ENST00000394154 ARMCX5Q6P1M9 558 aa11.88□□□□□ -0.51
VTI1BP2-201ENST00000394154 NOTUMQ6P988 496 aa11.88□□□□□ -0.51
VTI1BP2-201ENST00000394154 TXNDC11Q6PKC3 985 aa11.88□□□□□ -0.51
VTI1BP2-201ENST00000394154 PDZD4Q76G19 769 aaPredicted RBP11.88□□□□□ -0.51
VTI1BP2-201ENST00000394154 CAMKK1Q8N5S9 505 aa11.88□□□□□ -0.51
VTI1BP2-201ENST00000394154 RNF149Q8NC42 400 aa11.88□□□□□ -0.51
VTI1BP2-201ENST00000394154 GSTCDQ8NEC7 633 aa11.88□□□□□ -0.51
VTI1BP2-201ENST00000394154 TRIM44Q96DX7 344 aaPredicted RBP11.88□□□□□ -0.51
VTI1BP2-201ENST00000394154 TCEAL4Q96EI5 215 aa11.88□□□□□ -0.51
VTI1BP2-201ENST00000394154 CORO1BQ9BR76 489 aa11.88□□□□□ -0.51
VTI1BP2-201ENST00000394154 TRIM6Q9C030 488 aaPredicted RBP11.88□□□□□ -0.51
VTI1BP2-201ENST00000394154 SCUBE2Q9NQ36 999 aa11.88□□□□□ -0.51
VTI1BP2-201ENST00000394154 ARMCX3Q9UH62 379 aaPredicted RBP11.88□□□□□ -0.51
VTI1BP2-201ENST00000394154 LGALS16A8MUM7 142 aa11.87□□□□□ -0.51
VTI1BP2-201ENST00000394154 HEPACAM2A8MVW5 462 aa11.87□□□□□ -0.51
VTI1BP2-201ENST00000394154 HNRNPDLO14979 420 aaKnown RBP11.87□□□□□ -0.51
VTI1BP2-201ENST00000394154 EXOC3O60645 756 aa11.87□□□□□ -0.51
VTI1BP2-201ENST00000394154 ATG13O75143 517 aa11.87□□□□□ -0.51
VTI1BP2-201ENST00000394154 KIF4AO95239 1232 aa11.87□□□□□ -0.51
VTI1BP2-201ENST00000394154 GARTP22102 1010 aa11.87□□□□□ -0.51
VTI1BP2-201ENST00000394154 LIG4P49917 911 aa11.87□□□□□ -0.51
VTI1BP2-201ENST00000394154 PTENP60484 403 aa11.87□□□□□ -0.51
VTI1BP2-201ENST00000394154 SIM1P81133 766 aaPredicted RBP11.87□□□□□ -0.51
VTI1BP2-201ENST00000394154 UBXN1Q04323 297 aa11.87□□□□□ -0.51
VTI1BP2-201ENST00000394154 NCBP1Q09161 790 aaKnown RBP11.87□□□□□ -0.51
VTI1BP2-201ENST00000394154 SCAPQ12770 1279 aa11.87□□□□□ -0.51
VTI1BP2-201ENST00000394154 TUSC3Q13454 348 aa11.87□□□□□ -0.51
VTI1BP2-201ENST00000394154 PON2Q15165 354 aa11.87□□□□□ -0.51
VTI1BP2-201ENST00000394154 MAPK6Q16659 721 aa11.87□□□□□ -0.51
VTI1BP2-201ENST00000394154 FKBP15Q5T1M5 1219 aa11.87□□□□□ -0.51
VTI1BP2-201ENST00000394154 CDCA2Q69YH5 1023 aaPredicted RBP11.87□□□□□ -0.51
VTI1BP2-201ENST00000394154 SLFN12LQ6IEE8 588 aa11.87□□□□□ -0.51
VTI1BP2-201ENST00000394154 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.87□□□□□ -0.51
VTI1BP2-201ENST00000394154 TMC6Q7Z403 805 aa11.87□□□□□ -0.51
VTI1BP2-201ENST00000394154 VSTM4Q8IW00 320 aa11.87□□□□□ -0.51
VTI1BP2-201ENST00000394154 FAM186BQ8IYM0 893 aa11.87□□□□□ -0.51
VTI1BP2-201ENST00000394154 XXYLT1Q8NBI6 393 aa11.87□□□□□ -0.51
VTI1BP2-201ENST00000394154 ZSCAN18Q8TBC5 510 aaPredicted RBP11.87□□□□□ -0.51
VTI1BP2-201ENST00000394154 LRIG1Q96JA1 1093 aa11.87□□□□□ -0.51
VTI1BP2-201ENST00000394154 ZSWIM3Q96MP5 696 aa11.87□□□□□ -0.51
VTI1BP2-201ENST00000394154 PAAF1Q9BRP4 392 aa11.87□□□□□ -0.51
VTI1BP2-201ENST00000394154 NFKBIZQ9BYH8 718 aa11.87□□□□□ -0.51
VTI1BP2-201ENST00000394154 NXF3Q9H4D5 531 aaKnown RBP11.87□□□□□ -0.51
VTI1BP2-201ENST00000394154 IMPACTQ9P2X3 320 aa11.87□□□□□ -0.51
VTI1BP2-201ENST00000394154 MTRRQ9UBK8 725 aa11.87□□□□□ -0.51
VTI1BP2-201ENST00000394154 CACNG4Q9UBN1 327 aa11.87□□□□□ -0.51
VTI1BP2-201ENST00000394154 NCANO14594 1321 aa11.86□□□□□ -0.51
VTI1BP2-201ENST00000394154 SPAARA0A1B0GVQ0 90 aa11.86□□□□□ -0.51
VTI1BP2-201ENST00000394154 ANKRD63C9JTQ0 380 aa11.86□□□□□ -0.51
VTI1BP2-201ENST00000394154 PRRG1O14668 218 aa11.86□□□□□ -0.51
VTI1BP2-201ENST00000394154 KIAA0391O15091 583 aaKnown RBP11.86□□□□□ -0.51
VTI1BP2-201ENST00000394154 MAPK13O15264 365 aa11.86□□□□□ -0.51
VTI1BP2-201ENST00000394154 TEX33O43247 280 aa11.86□□□□□ -0.51
VTI1BP2-201ENST00000394154 TSPAN1O60635 241 aa11.86□□□□□ -0.51
VTI1BP2-201ENST00000394154 PIGRP01833 764 aa11.86□□□□□ -0.51
VTI1BP2-201ENST00000394154 PRKCBP05771 671 aa11.86□□□□□ -0.51
VTI1BP2-201ENST00000394154 KRT13P13646 458 aa11.86□□□□□ -0.51
VTI1BP2-201ENST00000394154 ELF1P32519 619 aa11.86□□□□□ -0.51
VTI1BP2-201ENST00000394154 CCR2P41597 374 aa11.86□□□□□ -0.51
VTI1BP2-201ENST00000394154 CLCN6P51797 869 aa11.86□□□□□ -0.51
VTI1BP2-201ENST00000394154 VWA3BQ502W6 1294 aa11.86□□□□□ -0.51
VTI1BP2-201ENST00000394154 CYP4A22Q5TCH4 519 aa11.86□□□□□ -0.51
VTI1BP2-201ENST00000394154 SPECC1LQ69YQ0 1117 aa11.86□□□□□ -0.51
VTI1BP2-201ENST00000394154 TAS1R3Q7RTX0 852 aa11.86□□□□□ -0.51
VTI1BP2-201ENST00000394154 TRIM59Q8IWR1 403 aa11.86□□□□□ -0.51
VTI1BP2-201ENST00000394154 HNRNPLLQ8WVV9 542 aaKnown RBP11.86□□□□□ -0.51
VTI1BP2-201ENST00000394154 POMGNT1Q8WZA1 660 aa11.86□□□□□ -0.51
VTI1BP2-201ENST00000394154 MRPL4Q9BYD3 311 aaKnown RBP11.86□□□□□ -0.51
VTI1BP2-201ENST00000394154 IKZF4Q9H2S9 585 aa11.86□□□□□ -0.51
VTI1BP2-201ENST00000394154 NDST4Q9H3R1 872 aa11.86□□□□□ -0.51
VTI1BP2-201ENST00000394154 PCIF1Q9H4Z3 704 aa11.86□□□□□ -0.51
VTI1BP2-201ENST00000394154 CCDC86Q9H6F5 360 aaKnown RBP11.86□□□□□ -0.51
VTI1BP2-201ENST00000394154 INTS13Q9NVM9 706 aa11.86□□□□□ -0.51
VTI1BP2-201ENST00000394154 HSPBP1Q9NZL4 362 aa11.86□□□□□ -0.51
VTI1BP2-201ENST00000394154 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.86□□□□□ -0.51
VTI1BP2-201ENST00000394154 CDY1Q9Y6F8 540 aa11.86□□□□□ -0.51
VTI1BP2-201ENST00000394154 ASCC3Q8N3C0 2202 aaKnown RBP11.86□□□□□ -0.51
VTI1BP2-201ENST00000394154 A0A1W2PQC6 194 aa11.85□□□□□ -0.51
VTI1BP2-201ENST00000394154 CASTOR2A6NHX0 329 aa11.85□□□□□ -0.51
VTI1BP2-201ENST00000394154 PCNX2A6NKB5 2137 aa11.85□□□□□ -0.51
VTI1BP2-201ENST00000394154 INO80B-WBP1J3KQ70 363 aa11.85□□□□□ -0.51
VTI1BP2-201ENST00000394154 FGFR3P22607 806 aa11.85□□□□□ -0.51
VTI1BP2-201ENST00000394154 AKAP5P24588 427 aa11.85□□□□□ -0.51
VTI1BP2-201ENST00000394154 MATR3P43243 847 aaKnown RBP eCLIP11.85□□□□□ -0.51
VTI1BP2-201ENST00000394154 CASP4P49662 377 aa11.85□□□□□ -0.51
VTI1BP2-201ENST00000394154 GSDMDP57764 484 aa11.85□□□□□ -0.51
VTI1BP2-201ENST00000394154 FCHO2Q0JRZ9 810 aa11.85□□□□□ -0.51
VTI1BP2-201ENST00000394154 LMAN2Q12907 356 aa11.85□□□□□ -0.51
VTI1BP2-201ENST00000394154 TMEM132AQ24JP5 1023 aa11.85□□□□□ -0.51
VTI1BP2-201ENST00000394154 ZNF423Q2M1K9 1284 aa11.85□□□□□ -0.51
VTI1BP2-201ENST00000394154 HS1BP3Q53T59 392 aa11.85□□□□□ -0.51
VTI1BP2-201ENST00000394154 MIIPQ5JXC2 388 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms