RNA–Protein interactions for RNA: ENST00000393211.3

COL17A1-203, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL17A1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-203ENST00000393211 APOC2P02655 101 aa10.47□□□□□ -0.73
COL17A1-203ENST00000393211 GSTA2P09210 222 aa10.47□□□□□ -0.73
COL17A1-203ENST00000393211 KDELR1P24390 212 aa10.47□□□□□ -0.73
COL17A1-203ENST00000393211 SSTR1P30872 391 aa10.47□□□□□ -0.73
COL17A1-203ENST00000393211 ETV4P43268 484 aa10.47□□□□□ -0.73
COL17A1-203ENST00000393211 EFNA5P52803 228 aa10.47□□□□□ -0.73
COL17A1-203ENST00000393211 KLC1Q07866 573 aa10.47□□□□□ -0.73
COL17A1-203ENST00000393211 PRKD1Q15139 912 aaPredicted RBP10.47□□□□□ -0.73
COL17A1-203ENST00000393211 NBPF20Q3BBV1 942 aa10.47□□□□□ -0.73
COL17A1-203ENST00000393211 MTERF2Q49AM1 385 aa10.47□□□□□ -0.73
COL17A1-203ENST00000393211 PLEKHG4Q58EX7 1191 aa10.47□□□□□ -0.73
COL17A1-203ENST00000393211 FNBP1LQ5T0N5 605 aa10.47□□□□□ -0.73
COL17A1-203ENST00000393211 CCDC62Q6P9F0 684 aa10.47□□□□□ -0.73
COL17A1-203ENST00000393211 ANKMY2Q8IV38 441 aa10.47□□□□□ -0.73
COL17A1-203ENST00000393211 OR5B17Q8NGF7 314 aa10.47□□□□□ -0.73
COL17A1-203ENST00000393211 SLC44A1Q8WWI5 657 aa10.47□□□□□ -0.73
COL17A1-203ENST00000393211 ZNF333Q96JL9 665 aa10.47□□□□□ -0.73
COL17A1-203ENST00000393211 VCXQ9H320 206 aa10.47□□□□□ -0.73
COL17A1-203ENST00000393211 SYNCQ9H7C4 482 aa10.47□□□□□ -0.73
COL17A1-203ENST00000393211 KANSL3Q9P2N6 904 aa10.47□□□□□ -0.73
COL17A1-203ENST00000393211 ZNF219Q9P2Y4 722 aaPredicted RBP10.47□□□□□ -0.73
COL17A1-203ENST00000393211 HEY2Q9UBP5 337 aa10.47□□□□□ -0.73
COL17A1-203ENST00000393211 LRCH1Q9Y2L9 728 aa10.47□□□□□ -0.73
COL17A1-203ENST00000393211 IKBKGQ9Y6K9 419 aa10.47□□□□□ -0.73
COL17A1-203ENST00000393211 MYH9P35579 1960 aaKnown RBP10.46□□□□□ -0.73
COL17A1-203ENST00000393211 F8W8V4 182 aa10.46□□□□□ -0.74
COL17A1-203ENST00000393211 GYG2O15488 501 aa10.46□□□□□ -0.74
COL17A1-203ENST00000393211 CST8O60676 142 aa10.46□□□□□ -0.74
COL17A1-203ENST00000393211 MAGEC1O60732 1142 aa10.46□□□□□ -0.74
COL17A1-203ENST00000393211 OATP04181 439 aa10.46□□□□□ -0.74
COL17A1-203ENST00000393211 KRT3P12035 628 aa10.46□□□□□ -0.74
COL17A1-203ENST00000393211 SKIP12755 728 aa10.46□□□□□ -0.74
COL17A1-203ENST00000393211 PSMA2P25787 234 aa10.46□□□□□ -0.74
COL17A1-203ENST00000393211 ICAM3P32942 547 aa10.46□□□□□ -0.74
COL17A1-203ENST00000393211 ZNF200P98182 395 aaPredicted RBP10.46□□□□□ -0.74
COL17A1-203ENST00000393211 SATB1Q01826 763 aa10.46□□□□□ -0.74
COL17A1-203ENST00000393211 TBCCQ15814 346 aa10.46□□□□□ -0.74
COL17A1-203ENST00000393211 MUM1Q2TAK8 710 aa10.46□□□□□ -0.74
COL17A1-203ENST00000393211 MSS51Q4VC12 460 aa10.46□□□□□ -0.74
COL17A1-203ENST00000393211 HP1BP3Q5SSJ5 553 aaPredicted RBP10.46□□□□□ -0.74
COL17A1-203ENST00000393211 LGSNQ5TDP6 509 aa10.46□□□□□ -0.74
COL17A1-203ENST00000393211 ANKRD22Q5VYY1 191 aa10.46□□□□□ -0.74
COL17A1-203ENST00000393211 TXNRD3NBQ6F5E7 133 aa10.46□□□□□ -0.74
COL17A1-203ENST00000393211 GPAT2Q6NUI2 795 aa10.46□□□□□ -0.74
COL17A1-203ENST00000393211 CAPN12Q6ZSI9 719 aa10.46□□□□□ -0.74
COL17A1-203ENST00000393211 SH2D5Q6ZV89 423 aa10.46□□□□□ -0.74
COL17A1-203ENST00000393211 CDAN1Q8IWY9 1227 aa10.46□□□□□ -0.74
COL17A1-203ENST00000393211 WDTC1Q8N5D0 677 aa10.46□□□□□ -0.74
COL17A1-203ENST00000393211 CMASQ8NFW8 434 aaPredicted RBP10.46□□□□□ -0.74
COL17A1-203ENST00000393211 RFWD2Q8NHY2 731 aa10.46□□□□□ -0.74
COL17A1-203ENST00000393211 RAB3IL1Q8TBN0 382 aa10.46□□□□□ -0.74
COL17A1-203ENST00000393211 SLC7A3Q8WY07 619 aa10.46□□□□□ -0.74
COL17A1-203ENST00000393211 MIPEPQ99797 713 aa10.46□□□□□ -0.74
COL17A1-203ENST00000393211 TARS2Q9BW92 718 aaKnown RBP10.46□□□□□ -0.74
COL17A1-203ENST00000393211 RPAP3Q9H6T3 665 aaPredicted RBP10.46□□□□□ -0.74
COL17A1-203ENST00000393211 RSAD1Q9HA92 442 aa10.46□□□□□ -0.74
COL17A1-203ENST00000393211 KCNK13Q9HB14 408 aa10.46□□□□□ -0.74
COL17A1-203ENST00000393211 CISHQ9NSE2 258 aa10.46□□□□□ -0.74
COL17A1-203ENST00000393211 SPATS2LQ9NUQ6 558 aaKnown RBP10.46□□□□□ -0.74
COL17A1-203ENST00000393211 MKS1Q9NXB0 559 aa10.46□□□□□ -0.74
COL17A1-203ENST00000393211 KCNK4Q9NYG8 393 aa10.46□□□□□ -0.74
COL17A1-203ENST00000393211 CNTN3Q9P232 1028 aa10.46□□□□□ -0.74
COL17A1-203ENST00000393211 ZNF212Q9UDV6 495 aa10.46□□□□□ -0.74
COL17A1-203ENST00000393211 RGS17Q9UGC6 210 aaPredicted RBP10.46□□□□□ -0.74
COL17A1-203ENST00000393211 XPO7Q9UIA9 1087 aaKnown RBP10.46□□□□□ -0.74
COL17A1-203ENST00000393211 ZNF180Q9UJW8 692 aa10.46□□□□□ -0.74
COL17A1-203ENST00000393211 BRWD3Q6RI45 1802 aa10.46□□□□□ -0.74
COL17A1-203ENST00000393211 LRRIQ4A6NIV6 560 aa10.45□□□□□ -0.74
COL17A1-203ENST00000393211 TRDMT1O14717 391 aaKnown RBP10.45□□□□□ -0.74
COL17A1-203ENST00000393211 MCF2LO15068 1137 aa10.45□□□□□ -0.74
COL17A1-203ENST00000393211 CHADO15335 359 aa10.45□□□□□ -0.74
COL17A1-203ENST00000393211 AHCYL1O43865 530 aa10.45□□□□□ -0.74
COL17A1-203ENST00000393211 ADCY3O60266 1144 aa10.45□□□□□ -0.74
COL17A1-203ENST00000393211 ENTPD5O75356 428 aa10.45□□□□□ -0.74
COL17A1-203ENST00000393211 LRCH4O75427 683 aa10.45□□□□□ -0.74
COL17A1-203ENST00000393211 RGS20O76081 388 aa10.45□□□□□ -0.74
COL17A1-203ENST00000393211 ECM2O94769 699 aaPredicted RBP10.45□□□□□ -0.74
COL17A1-203ENST00000393211 FESP07332 822 aa10.45□□□□□ -0.74
COL17A1-203ENST00000393211 INHBAP08476 426 aa10.45□□□□□ -0.74
COL17A1-203ENST00000393211 DLDP09622 509 aaKnown RBP10.45□□□□□ -0.74
COL17A1-203ENST00000393211 LINGO3P0C6S8 592 aa10.45□□□□□ -0.74
COL17A1-203ENST00000393211 ESRRAP11474 423 aaPredicted RBP10.45□□□□□ -0.74
COL17A1-203ENST00000393211 ATP4AP20648 1035 aa10.45□□□□□ -0.74
COL17A1-203ENST00000393211 BRD2P25440 801 aaKnown RBP10.45□□□□□ -0.74
COL17A1-203ENST00000393211 CHRNA5P30532 468 aa10.45□□□□□ -0.74
COL17A1-203ENST00000393211 RAP1GDS1P52306 607 aa10.45□□□□□ -0.74
COL17A1-203ENST00000393211 ZBTB16Q05516 673 aa10.45□□□□□ -0.74
COL17A1-203ENST00000393211 SLC34A1Q06495 639 aa10.45□□□□□ -0.74
COL17A1-203ENST00000393211 PTK7Q13308 1070 aa10.45□□□□□ -0.74
COL17A1-203ENST00000393211 TNFAIP1Q13829 316 aa10.45□□□□□ -0.74
COL17A1-203ENST00000393211 DPYSL3Q14195 570 aa10.45□□□□□ -0.74
COL17A1-203ENST00000393211 CCDC6Q16204 474 aa10.45□□□□□ -0.74
COL17A1-203ENST00000393211 DBN1Q16643 649 aa10.45□□□□□ -0.74
COL17A1-203ENST00000393211 DUOXA2Q1HG44 320 aa10.45□□□□□ -0.74
COL17A1-203ENST00000393211 BBS9Q3SYG4 887 aa10.45□□□□□ -0.74
COL17A1-203ENST00000393211 C4orf22Q6V702 233 aa10.45□□□□□ -0.74
COL17A1-203ENST00000393211 VPS52Q8N1B4 723 aa10.45□□□□□ -0.74
COL17A1-203ENST00000393211 PPFIBP2Q8ND30 876 aa10.45□□□□□ -0.74
COL17A1-203ENST00000393211 TTC8Q8TAM2 541 aa10.45□□□□□ -0.74
COL17A1-203ENST00000393211 MCUR1Q96AQ8 359 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms