RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 GPD2P43304 727 aa14.06□□□□□ -0.16
USP44-202ENST00000393091 PPP3CCP48454 512 aa14.06□□□□□ -0.16
USP44-202ENST00000393091 GSDMDP57764 484 aa14.06□□□□□ -0.16
USP44-202ENST00000393091 RPL10AP62906 217 aaKnown RBP14.06□□□□□ -0.16
USP44-202ENST00000393091 BST2Q10589 180 aaKnown RBP14.06□□□□□ -0.16
USP44-202ENST00000393091 SLC39A12Q504Y0 691 aa14.06□□□□□ -0.16
USP44-202ENST00000393091 MDH1BQ5I0G3 518 aa14.06□□□□□ -0.16
USP44-202ENST00000393091 NOP9Q86U38 636 aaKnown RBP14.06□□□□□ -0.16
USP44-202ENST00000393091 CYFIP2Q96F07 1278 aa14.06□□□□□ -0.16
USP44-202ENST00000393091 S1PR5Q9H228 398 aa14.06□□□□□ -0.16
USP44-202ENST00000393091 ASNSD1Q9NWL6 643 aa14.06□□□□□ -0.16
USP44-202ENST00000393091 EHD2Q9NZN4 543 aa14.06□□□□□ -0.16
USP44-202ENST00000393091 PES1O00541 588 aaKnown RBP14.06□□□□□ -0.16
USP44-202ENST00000393091 CYP26A1O43174 497 aa14.06□□□□□ -0.16
USP44-202ENST00000393091 GLP2RO95838 553 aa14.06□□□□□ -0.16
USP44-202ENST00000393091 SRGAP2BP0DMP2 458 aa14.06□□□□□ -0.16
USP44-202ENST00000393091 NPR3P17342 541 aa14.06□□□□□ -0.16
USP44-202ENST00000393091 FMO1Q01740 532 aa14.06□□□□□ -0.16
USP44-202ENST00000393091 PM20D1Q6GTS8 502 aa14.06□□□□□ -0.16
USP44-202ENST00000393091 CLEC20AQ6ZU45 233 aa14.06□□□□□ -0.16
USP44-202ENST00000393091 CACNA2D4Q7Z3S7 1137 aa14.06□□□□□ -0.16
USP44-202ENST00000393091 ZMIZ2Q8NF64 920 aa14.06□□□□□ -0.16
USP44-202ENST00000393091 VCPIP1Q96JH7 1222 aa14.06□□□□□ -0.16
USP44-202ENST00000393091 PPP1R9BQ96SB3 815 aa14.06□□□□□ -0.16
USP44-202ENST00000393091 GAS2L1Q99501 681 aaPredicted RBP14.06□□□□□ -0.16
USP44-202ENST00000393091 CDX2Q99626 313 aaPredicted RBP14.06□□□□□ -0.16
USP44-202ENST00000393091 CHD7Q9P2D1 2997 aa14.06□□□□□ -0.16
USP44-202ENST00000393091 HCRTO43612 131 aa14.06□□□□□ -0.16
USP44-202ENST00000393091 PDE6CP51160 858 aa14.06□□□□□ -0.16
USP44-202ENST00000393091 E4F1Q66K89 784 aaPredicted RBP14.06□□□□□ -0.16
USP44-202ENST00000393091 ANKRD54Q6NXT1 300 aa14.06□□□□□ -0.16
USP44-202ENST00000393091 TMEM110Q86TL2 294 aa14.06□□□□□ -0.16
USP44-202ENST00000393091 SLC47A2Q86VL8 602 aa14.06□□□□□ -0.16
USP44-202ENST00000393091 TTC30AQ86WT1 665 aa14.06□□□□□ -0.16
USP44-202ENST00000393091 SPATA2LQ8IUW3 424 aaPredicted RBP14.06□□□□□ -0.16
USP44-202ENST00000393091 IRGQQ8WZA9 623 aa14.06□□□□□ -0.16
USP44-202ENST00000393091 ELMO3Q96BJ8 720 aa14.06□□□□□ -0.16
USP44-202ENST00000393091 SPAG5Q96R06 1193 aa14.06□□□□□ -0.16
USP44-202ENST00000393091 SMOQ99835 787 aa14.06□□□□□ -0.16
USP44-202ENST00000393091 CRISPLD1Q9H336 500 aa14.06□□□□□ -0.16
USP44-202ENST00000393091 PRDM12Q9H4Q4 367 aa14.06□□□□□ -0.16
USP44-202ENST00000393091 SFXN1Q9H9B4 322 aa14.06□□□□□ -0.16
USP44-202ENST00000393091 DMAP1Q9NPF5 467 aaPredicted RBP14.06□□□□□ -0.16
USP44-202ENST00000393091 ZMYM5Q9UJ78 669 aa14.06□□□□□ -0.16
USP44-202ENST00000393091 INSL5Q9Y5Q6 135 aa14.06□□□□□ -0.16
USP44-202ENST00000393091 TPM1P09493 284 aa14.05□□□□□ -0.16
USP44-202ENST00000393091 ZDHHC11BP0C7U3 371 aa14.05□□□□□ -0.16
USP44-202ENST00000393091 CD58P19256 250 aa14.05□□□□□ -0.16
USP44-202ENST00000393091 CENPCQ03188 943 aa14.05□□□□□ -0.16
USP44-202ENST00000393091 ASIC2Q16515 512 aa14.05□□□□□ -0.16
USP44-202ENST00000393091 TCEAL5Q5H9L2 206 aa14.05□□□□□ -0.16
USP44-202ENST00000393091 PHF13Q86YI8 300 aaPredicted RBP14.05□□□□□ -0.16
USP44-202ENST00000393091 TMEM139Q8IV31 216 aa14.05□□□□□ -0.16
USP44-202ENST00000393091 WDTC1Q8N5D0 677 aa14.05□□□□□ -0.16
USP44-202ENST00000393091 PSMG2Q969U7 264 aa14.05□□□□□ -0.16
USP44-202ENST00000393091 AGPAT1Q99943 283 aa14.05□□□□□ -0.16
USP44-202ENST00000393091 PDGFRBP09619 1106 aa14.05□□□□□ -0.16
USP44-202ENST00000393091 KLRC2P26717 231 aa14.05□□□□□ -0.16
USP44-202ENST00000393091 ARHGAP44Q17R89 818 aa14.05□□□□□ -0.16
USP44-202ENST00000393091 ZDHHC17Q8IUH5 632 aa14.05□□□□□ -0.16
USP44-202ENST00000393091 KREMEN2Q8NCW0 462 aa14.05□□□□□ -0.16
USP44-202ENST00000393091 AUTS2Q8WXX7 1259 aa14.05□□□□□ -0.16
USP44-202ENST00000393091 HEXIM2Q96MH2 286 aaKnown RBP14.05□□□□□ -0.16
USP44-202ENST00000393091 TLE6Q9H808 572 aa14.05□□□□□ -0.16
USP44-202ENST00000393091 GTF3C4Q9UKN8 822 aa14.05□□□□□ -0.16
USP44-202ENST00000393091 COL4A2P08572 1712 aa14.05□□□□□ -0.16
USP44-202ENST00000393091 MYH10P35580 1976 aa14.04□□□□□ -0.16
USP44-202ENST00000393091 ATF6P18850 670 aa14.04□□□□□ -0.16
USP44-202ENST00000393091 ACAT1P24752 427 aaKnown RBP14.04□□□□□ -0.16
USP44-202ENST00000393091 ACADSBP45954 432 aa14.04□□□□□ -0.16
USP44-202ENST00000393091 RAPGEF1Q13905 1077 aa14.04□□□□□ -0.16
USP44-202ENST00000393091 TMC6Q7Z403 805 aa14.04□□□□□ -0.16
USP44-202ENST00000393091 CCDC170Q8IYT3 715 aa14.04□□□□□ -0.16
USP44-202ENST00000393091 SLC2A14Q8TDB8 520 aa14.04□□□□□ -0.16
USP44-202ENST00000393091 ZNF707Q96C28 371 aaPredicted RBP14.04□□□□□ -0.16
USP44-202ENST00000393091 ISCUQ9H1K1 167 aa14.04□□□□□ -0.16
USP44-202ENST00000393091 TSPAN16Q9UKR8 245 aa14.04□□□□□ -0.16
USP44-202ENST00000393091 HCFC2Q9Y5Z7 792 aa14.04□□□□□ -0.16
USP44-202ENST00000393091 CLUHO75153 1309 aa14.04□□□□□ -0.16
USP44-202ENST00000393091 RTN3O95197 1032 aaPredicted RBP14.04□□□□□ -0.16
USP44-202ENST00000393091 FAM200BP0CF97 657 aa14.04□□□□□ -0.16
USP44-202ENST00000393091 TUBP50607 506 aa14.04□□□□□ -0.16
USP44-202ENST00000393091 PTP4A2Q12974 167 aa14.04□□□□□ -0.16
USP44-202ENST00000393091 CLEC16AQ2KHT3 1053 aa14.04□□□□□ -0.16
USP44-202ENST00000393091 CCDC186Q7Z3E2 898 aa14.04□□□□□ -0.16
USP44-202ENST00000393091 PCMTD1Q96MG8 357 aaPredicted RBP14.04□□□□□ -0.16
USP44-202ENST00000393091 NLRC4Q9NPP4 1024 aa14.04□□□□□ -0.16
USP44-202ENST00000393091 TMEM30AQ9NV96 361 aa14.04□□□□□ -0.16
USP44-202ENST00000393091 CLEC1BQ9P126 229 aa14.04□□□□□ -0.16
USP44-202ENST00000393091 YIPF1Q9Y548 306 aa14.04□□□□□ -0.16
USP44-202ENST00000393091 RFXAPO00287 272 aa14.04□□□□□ -0.16
USP44-202ENST00000393091 KRT9P35527 623 aa14.04□□□□□ -0.16
USP44-202ENST00000393091 PSMC1P62191 440 aaKnown RBP14.04□□□□□ -0.16
USP44-202ENST00000393091 NOMO3P69849 1222 aa14.04□□□□□ -0.16
USP44-202ENST00000393091 ITIH3Q06033 890 aa14.04□□□□□ -0.16
USP44-202ENST00000393091 TMC8Q8IU68 726 aa14.04□□□□□ -0.16
USP44-202ENST00000393091 C12orf29Q8N999 325 aa14.04□□□□□ -0.16
USP44-202ENST00000393091 PRKD2Q9BZL6 878 aa14.04□□□□□ -0.16
USP44-202ENST00000393091 MTUS1Q9ULD2 1270 aa14.04□□□□□ -0.16
USP44-202ENST00000393091 PCDHGC5Q9Y5F6 944 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms