RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 ZFYVE27Q5T4F4 411 aa21.12■□□□□ 0.97
PTPN11-202ENST00000392597 ARHGAP17Q68EM7 881 aa21.12■□□□□ 0.97
PTPN11-202ENST00000392597 ANKS1BQ7Z6G8 1248 aa21.12■□□□□ 0.97
PTPN11-202ENST00000392597 FAM228AQ86W67 206 aa21.12■□□□□ 0.97
PTPN11-202ENST00000392597 SMG8Q8ND04 991 aaKnown RBP21.12■□□□□ 0.97
PTPN11-202ENST00000392597 UBA3Q8TBC4 463 aa21.12■□□□□ 0.97
PTPN11-202ENST00000392597 STK32AQ8WU08 396 aa21.12■□□□□ 0.97
PTPN11-202ENST00000392597 SNF8Q96H20 258 aa21.12■□□□□ 0.97
PTPN11-202ENST00000392597 PABPC3Q9H361 631 aaKnown RBP21.12■□□□□ 0.97
PTPN11-202ENST00000392597 ATP8A1Q9Y2Q0 1164 aa21.12■□□□□ 0.97
PTPN11-202ENST00000392597 TRPV2Q9Y5S1 764 aa21.12■□□□□ 0.97
PTPN11-202ENST00000392597 hCG_1818297A0A087WSY0 165 aa21.11■□□□□ 0.97
PTPN11-202ENST00000392597 SEPT4O43236 478 aa21.11■□□□□ 0.97
PTPN11-202ENST00000392597 CDKN2BP42772 138 aa21.11■□□□□ 0.97
PTPN11-202ENST00000392597 KCTD19Q17RG1 926 aaPredicted RBP21.11■□□□□ 0.97
PTPN11-202ENST00000392597 SOWAHAQ2M3V2 549 aa21.11■□□□□ 0.97
PTPN11-202ENST00000392597 NBPF20Q3BBV1 942 aa21.11■□□□□ 0.97
PTPN11-202ENST00000392597 LIMS2Q7Z4I7 341 aa21.11■□□□□ 0.97
PTPN11-202ENST00000392597 RPAINQ86UA6 219 aa21.11■□□□□ 0.97
PTPN11-202ENST00000392597 ATP6V1G3Q96LB4 118 aa21.11■□□□□ 0.97
PTPN11-202ENST00000392597 TSPYL1Q9H0U9 437 aa21.11■□□□□ 0.97
PTPN11-202ENST00000392597 RNF39Q9H2S5 420 aa21.11■□□□□ 0.97
PTPN11-202ENST00000392597 TMBIM4Q9HC24 238 aa21.11■□□□□ 0.97
PTPN11-202ENST00000392597 ASNSD1Q9NWL6 643 aa21.11■□□□□ 0.97
PTPN11-202ENST00000392597 ASIC3Q9UHC3 531 aa21.11■□□□□ 0.97
PTPN11-202ENST00000392597 NEU2Q9Y3R4 380 aa21.11■□□□□ 0.97
PTPN11-202ENST00000392597 LRRD1A4D1F6 860 aa21.11■□□□□ 0.97
PTPN11-202ENST00000392597 PI4K2BG5E9Z4 385 aa21.11■□□□□ 0.97
PTPN11-202ENST00000392597 NUDT17P0C025 328 aa21.11■□□□□ 0.97
PTPN11-202ENST00000392597 MYZAPP0CAP1 466 aa21.11■□□□□ 0.97
PTPN11-202ENST00000392597 RARBP10826 455 aa21.11■□□□□ 0.97
PTPN11-202ENST00000392597 PCK1P35558 622 aa21.11■□□□□ 0.97
PTPN11-202ENST00000392597 ZNF143P52747 638 aaPredicted RBP21.11■□□□□ 0.97
PTPN11-202ENST00000392597 PMS2P54278 862 aa21.11■□□□□ 0.97
PTPN11-202ENST00000392597 ZNF844Q08AG5 666 aa21.11■□□□□ 0.97
PTPN11-202ENST00000392597 SV2CQ496J9 727 aa21.11■□□□□ 0.97
PTPN11-202ENST00000392597 PPP1R26Q5T8A7 1209 aaPredicted RBP21.11■□□□□ 0.97
PTPN11-202ENST00000392597 FAM102AQ5T9C2 384 aaPredicted RBP21.11■□□□□ 0.97
PTPN11-202ENST00000392597 EMC10Q5UCC4 262 aa21.11■□□□□ 0.97
PTPN11-202ENST00000392597 DPH6Q7L8W6 267 aa21.11■□□□□ 0.97
PTPN11-202ENST00000392597 ACOT1Q86TX2 421 aa21.11■□□□□ 0.97
PTPN11-202ENST00000392597 ARFGAP1Q8N6T3 406 aa21.11■□□□□ 0.97
PTPN11-202ENST00000392597 C12orf29Q8N999 325 aa21.11■□□□□ 0.97
PTPN11-202ENST00000392597 RAPGEF5Q92565 580 aa21.11■□□□□ 0.97
PTPN11-202ENST00000392597 KLHL11Q9NVR0 708 aa21.11■□□□□ 0.97
PTPN11-202ENST00000392597 HESX1Q9UBX0 185 aa21.11■□□□□ 0.97
PTPN11-202ENST00000392597 BRCA2P51587 3418 aa21.1■□□□□ 0.97
PTPN11-202ENST00000392597 KPNA7A9QM74 516 aa21.1■□□□□ 0.97
PTPN11-202ENST00000392597 RNF8O76064 485 aa21.1■□□□□ 0.97
PTPN11-202ENST00000392597 IVDP26440 423 aa21.1■□□□□ 0.97
PTPN11-202ENST00000392597 TAF6P49848 677 aa21.1■□□□□ 0.97
PTPN11-202ENST00000392597 TAZQ16635 292 aa21.1■□□□□ 0.97
PTPN11-202ENST00000392597 TXNRD3NBQ6F5E7 133 aa21.1■□□□□ 0.97
PTPN11-202ENST00000392597 TWF2Q6IBS0 349 aaKnown RBP21.1■□□□□ 0.97
PTPN11-202ENST00000392597 CRYBG2Q8N1P7 616 aa21.1■□□□□ 0.97
PTPN11-202ENST00000392597 CCDC89Q8N998 374 aa21.1■□□□□ 0.97
PTPN11-202ENST00000392597 BBOF1Q8ND07 529 aa21.1■□□□□ 0.97
PTPN11-202ENST00000392597 SLAIN1Q8ND83 568 aa21.1■□□□□ 0.97
PTPN11-202ENST00000392597 CCHCR1Q8TD31 782 aa21.1■□□□□ 0.97
PTPN11-202ENST00000392597 CCDC114Q96M63 670 aa21.1■□□□□ 0.97
PTPN11-202ENST00000392597 CNPY3Q9BT09 278 aa21.1■□□□□ 0.97
PTPN11-202ENST00000392597 SLC4A5Q9BY07 1137 aa21.1■□□□□ 0.97
PTPN11-202ENST00000392597 FRMD8P1Q9BZ68 369 aaPredicted RBP21.1■□□□□ 0.97
PTPN11-202ENST00000392597 KLK14Q9P0G3 267 aa21.1■□□□□ 0.97
PTPN11-202ENST00000392597 CDY2AQ9Y6F7 541 aa21.1■□□□□ 0.97
PTPN11-202ENST00000392597 C3orf70A6NLC5 250 aaPredicted RBP21.09■□□□□ 0.97
PTPN11-202ENST00000392597 A6NNZ2 444 aa21.09■□□□□ 0.97
PTPN11-202ENST00000392597 E5RJQ4 531 aa21.09■□□□□ 0.97
PTPN11-202ENST00000392597 LIASO43766 372 aa21.09■□□□□ 0.97
PTPN11-202ENST00000392597 RARGP13631 454 aa21.09■□□□□ 0.97
PTPN11-202ENST00000392597 LRPAP1P30533 357 aa21.09■□□□□ 0.97
PTPN11-202ENST00000392597 TUBB8Q3ZCM7 444 aa21.09■□□□□ 0.97
PTPN11-202ENST00000392597 CXCL17Q6UXB2 119 aa21.09■□□□□ 0.97
PTPN11-202ENST00000392597 ZNF365Q70YC5 407 aa21.09■□□□□ 0.97
PTPN11-202ENST00000392597 CTU1Q7Z7A3 348 aaKnown RBP21.09■□□□□ 0.97
PTPN11-202ENST00000392597 TMEM110Q86TL2 294 aa21.09■□□□□ 0.97
PTPN11-202ENST00000392597 EMC1Q8N766 993 aa21.09■□□□□ 0.97
PTPN11-202ENST00000392597 OR6B3Q8NGW1 331 aa21.09■□□□□ 0.97
PTPN11-202ENST00000392597 CHST12Q9NRB3 414 aa21.09■□□□□ 0.97
PTPN11-202ENST00000392597 DRG1Q9Y295 367 aaKnown RBP21.09■□□□□ 0.97
PTPN11-202ENST00000392597 NME7Q9Y5B8 376 aa21.09■□□□□ 0.97
PTPN11-202ENST00000392597 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.09■□□□□ 0.97
PTPN11-202ENST00000392597 PTCH2Q9Y6C5 1203 aa21.09■□□□□ 0.97
PTPN11-202ENST00000392597 FAM163BP0C2L3 166 aa21.09■□□□□ 0.97
PTPN11-202ENST00000392597 KRT10P13645 584 aa21.09■□□□□ 0.97
PTPN11-202ENST00000392597 ATF2P15336 505 aa21.09■□□□□ 0.97
PTPN11-202ENST00000392597 SKOR1P84550 965 aa21.09■□□□□ 0.97
PTPN11-202ENST00000392597 RHBDF2Q6PJF5 856 aa21.09■□□□□ 0.97
PTPN11-202ENST00000392597 FAM183BPQ6ZVS7 135 aa21.09■□□□□ 0.97
PTPN11-202ENST00000392597 SERINC5Q86VE9 423 aa21.09■□□□□ 0.97
PTPN11-202ENST00000392597 SESTD1Q86VW0 696 aa21.09■□□□□ 0.97
PTPN11-202ENST00000392597 TTC30AQ86WT1 665 aa21.09■□□□□ 0.97
PTPN11-202ENST00000392597 ZDHHC17Q8IUH5 632 aa21.09■□□□□ 0.97
PTPN11-202ENST00000392597 SLC35F5Q8WV83 523 aa21.09■□□□□ 0.97
PTPN11-202ENST00000392597 KBTBD7Q8WVZ9 684 aa21.09■□□□□ 0.97
PTPN11-202ENST00000392597 EPB41L4BQ9H329 900 aa21.09■□□□□ 0.97
PTPN11-202ENST00000392597 C2CD4BA6NLJ0 364 aa21.08■□□□□ 0.97
PTPN11-202ENST00000392597 A8MXQ7 604 aa21.08■□□□□ 0.97
PTPN11-202ENST00000392597 TP73O15350 636 aa21.08■□□□□ 0.97
PTPN11-202ENST00000392597 SHOX2O60902 331 aaPredicted RBP21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms