RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 SLC13A4Q9UKG4 626 aa20.47■□□□□ 0.87
SHANK1-203ENST00000391813 CYP11B2P19099 503 aa20.46■□□□□ 0.87
SHANK1-203ENST00000391813 ATP6V1C1P21283 382 aa20.46■□□□□ 0.87
SHANK1-203ENST00000391813 PSMA4P25789 261 aaKnown RBP20.46■□□□□ 0.87
SHANK1-203ENST00000391813 GSTT1P30711 240 aa20.46■□□□□ 0.87
SHANK1-203ENST00000391813 SKIV2L2P42285 1042 aaKnown RBP20.46■□□□□ 0.87
SHANK1-203ENST00000391813 FKBP1AP62942 108 aaKnown RBP20.46■□□□□ 0.87
SHANK1-203ENST00000391813 GPC2Q8N158 579 aa20.46■□□□□ 0.87
SHANK1-203ENST00000391813 TNIP2Q8NFZ5 429 aa20.46■□□□□ 0.87
SHANK1-203ENST00000391813 CDC26Q8NHZ8 85 aa20.46■□□□□ 0.87
SHANK1-203ENST00000391813 CKAP2Q8WWK9 683 aa20.46■□□□□ 0.87
SHANK1-203ENST00000391813 KATNAL1Q9BW62 490 aa20.46■□□□□ 0.87
SHANK1-203ENST00000391813 DMAP1Q9NPF5 467 aaPredicted RBP20.46■□□□□ 0.87
SHANK1-203ENST00000391813 TYW5A2RUC4 315 aaKnown RBP20.46■□□□□ 0.87
SHANK1-203ENST00000391813 SLC4A1P02730 911 aa20.46■□□□□ 0.87
SHANK1-203ENST00000391813 RNF43Q68DV7 783 aa20.46■□□□□ 0.87
SHANK1-203ENST00000391813 SLC26A11Q86WA9 606 aa20.46■□□□□ 0.87
SHANK1-203ENST00000391813 RNF135Q8IUD6 432 aa20.46■□□□□ 0.87
SHANK1-203ENST00000391813 ATG4AQ8WYN0 398 aa20.46■□□□□ 0.87
SHANK1-203ENST00000391813 MYLK2Q9H1R3 596 aa20.46■□□□□ 0.87
SHANK1-203ENST00000391813 METTL5Q9NRN9 209 aaKnown RBP20.46■□□□□ 0.87
SHANK1-203ENST00000391813 FCHO1O14526 889 aa20.46■□□□□ 0.87
SHANK1-203ENST00000391813 ATXN3P54252 364 aaPredicted RBP20.46■□□□□ 0.87
SHANK1-203ENST00000391813 XRCC4Q13426 336 aa20.46■□□□□ 0.87
SHANK1-203ENST00000391813 IFNEQ86WN2 208 aa20.46■□□□□ 0.87
SHANK1-203ENST00000391813 GIMAP4Q9NUV9 329 aa20.46■□□□□ 0.87
SHANK1-203ENST00000391813 SMIM31A0A1B0GVY4 71 aa20.46■□□□□ 0.87
SHANK1-203ENST00000391813 MAFGO15525 162 aa20.46■□□□□ 0.87
SHANK1-203ENST00000391813 KCNA2P16389 499 aa20.46■□□□□ 0.87
SHANK1-203ENST00000391813 CAP2P40123 477 aa20.46■□□□□ 0.87
SHANK1-203ENST00000391813 AMPD2Q01433 879 aa20.46■□□□□ 0.87
SHANK1-203ENST00000391813 BAATQ14032 418 aaPredicted RBP20.46■□□□□ 0.87
SHANK1-203ENST00000391813 NUDT12Q9BQG2 462 aa20.46■□□□□ 0.87
SHANK1-203ENST00000391813 POLR3FQ9H1D9 316 aaPredicted RBP20.46■□□□□ 0.87
SHANK1-203ENST00000391813 PARVBQ9HBI1 364 aa20.46■□□□□ 0.87
SHANK1-203ENST00000391813 OSGEPQ9NPF4 335 aa20.46■□□□□ 0.87
SHANK1-203ENST00000391813 SHOC2Q9UQ13 582 aa20.46■□□□□ 0.87
SHANK1-203ENST00000391813 DRD4P21917 467 aa20.45■□□□□ 0.86
SHANK1-203ENST00000391813 CNTFP26441 200 aa20.45■□□□□ 0.86
SHANK1-203ENST00000391813 OR6P1Q8NGX9 317 aa20.45■□□□□ 0.86
SHANK1-203ENST00000391813 GABBR1Q9UBS5 961 aa20.45■□□□□ 0.86
SHANK1-203ENST00000391813 STARD13Q9Y3M8 1113 aa20.45■□□□□ 0.86
SHANK1-203ENST00000391813 FBXO36Q8NEA4 188 aa20.45■□□□□ 0.86
SHANK1-203ENST00000391813 FAM81AQ8TBF8 368 aa20.45■□□□□ 0.86
SHANK1-203ENST00000391813 ACTL7BQ9Y614 415 aa20.45■□□□□ 0.86
SHANK1-203ENST00000391813 NSUN2Q08J23 767 aaKnown RBP eCLIP20.45■□□□□ 0.86
SHANK1-203ENST00000391813 TRIM60Q495X7 471 aa20.45■□□□□ 0.86
SHANK1-203ENST00000391813 ZFP1Q6P2D0 407 aa20.45■□□□□ 0.86
SHANK1-203ENST00000391813 ANGPTL8Q6UXH0 198 aa20.45■□□□□ 0.86
SHANK1-203ENST00000391813 TMEM237Q96Q45 408 aa20.45■□□□□ 0.86
SHANK1-203ENST00000391813 NAT9Q9BTE0 207 aa20.45■□□□□ 0.86
SHANK1-203ENST00000391813 AGPAT3Q9NRZ7 376 aa20.45■□□□□ 0.86
SHANK1-203ENST00000391813 SAC3D1A6NKF1 404 aa20.45■□□□□ 0.86
SHANK1-203ENST00000391813 PIK3CDO00329 1044 aa20.45■□□□□ 0.86
SHANK1-203ENST00000391813 USP1O94782 785 aa20.45■□□□□ 0.86
SHANK1-203ENST00000391813 PSMG1O95456 288 aa20.45■□□□□ 0.86
SHANK1-203ENST00000391813 EFNA5P52803 228 aa20.45■□□□□ 0.86
SHANK1-203ENST00000391813 PRCCQ92733 491 aaPredicted RBP20.45■□□□□ 0.86
SHANK1-203ENST00000391813 SLCO1B7G3V0H7 640 aa20.44■□□□□ 0.86
SHANK1-203ENST00000391813 PLEKHA7Q6IQ23 1121 aa20.44■□□□□ 0.86
SHANK1-203ENST00000391813 B3GNT6Q6ZMB0 384 aa20.44■□□□□ 0.86
SHANK1-203ENST00000391813 PATL1Q86TB9 770 aaKnown RBP20.44■□□□□ 0.86
SHANK1-203ENST00000391813 NUP93Q8N1F7 819 aa20.44■□□□□ 0.86
SHANK1-203ENST00000391813 FAR2Q96K12 515 aa20.44■□□□□ 0.86
SHANK1-203ENST00000391813 INTS13Q9NVM9 706 aa20.44■□□□□ 0.86
SHANK1-203ENST00000391813 C3orf70A6NLC5 250 aaPredicted RBP20.44■□□□□ 0.86
SHANK1-203ENST00000391813 YWHABP31946 246 aaKnown RBP20.44■□□□□ 0.86
SHANK1-203ENST00000391813 TSTA3Q13630 321 aaPredicted RBP20.44■□□□□ 0.86
SHANK1-203ENST00000391813 SWSAP1Q6NVH7 229 aa20.44■□□□□ 0.86
SHANK1-203ENST00000391813 TRAF7Q6Q0C0 670 aa20.44■□□□□ 0.86
SHANK1-203ENST00000391813 EXD1Q8NHP7 514 aa20.44■□□□□ 0.86
SHANK1-203ENST00000391813 WDR60Q8WVS4 1066 aa20.44■□□□□ 0.86
SHANK1-203ENST00000391813 DGAT1O75907 488 aa20.44■□□□□ 0.86
SHANK1-203ENST00000391813 ALDH1A1P00352 501 aa20.44■□□□□ 0.86
SHANK1-203ENST00000391813 RPL21P46778 160 aaKnown RBP20.44■□□□□ 0.86
SHANK1-203ENST00000391813 VCPP55072 806 aaKnown RBP20.44■□□□□ 0.86
SHANK1-203ENST00000391813 ZC2HC1CQ53FD0 456 aaPredicted RBP20.44■□□□□ 0.86
SHANK1-203ENST00000391813 PRAMEF18Q5VWM3 479 aa20.44■□□□□ 0.86
SHANK1-203ENST00000391813 SH3RF1Q7Z6J0 888 aa20.44■□□□□ 0.86
SHANK1-203ENST00000391813 SHCBP1LQ9BZQ2 653 aa20.44■□□□□ 0.86
SHANK1-203ENST00000391813 MAD2L2Q9UI95 211 aa20.44■□□□□ 0.86
SHANK1-203ENST00000391813 FNDC3AQ9Y2H6 1198 aaKnown RBP20.44■□□□□ 0.86
SHANK1-203ENST00000391813 MROH7Q68CQ1 1323 aa20.44■□□□□ 0.86
SHANK1-203ENST00000391813 KBTBD13C9JR72 458 aa20.43■□□□□ 0.86
SHANK1-203ENST00000391813 KPNA4O00629 521 aaPredicted RBP20.43■□□□□ 0.86
SHANK1-203ENST00000391813 SHOX2O60902 331 aaPredicted RBP20.43■□□□□ 0.86
SHANK1-203ENST00000391813 C16orf72Q14CZ0 275 aa20.43■□□□□ 0.86
SHANK1-203ENST00000391813 ZNF398Q8TD17 642 aa20.43■□□□□ 0.86
SHANK1-203ENST00000391813 SCFD1Q8WVM8 642 aa20.43■□□□□ 0.86
SHANK1-203ENST00000391813 KAZALD1Q96I82 304 aa20.43■□□□□ 0.86
SHANK1-203ENST00000391813 EPS8L2Q9H6S3 715 aa20.43■□□□□ 0.86
SHANK1-203ENST00000391813 JPH1Q9HDC5 661 aaPredicted RBP20.43■□□□□ 0.86
SHANK1-203ENST00000391813 DGKIO75912 1065 aa20.43■□□□□ 0.86
SHANK1-203ENST00000391813 MYBL2P10244 700 aa20.43■□□□□ 0.86
SHANK1-203ENST00000391813 SAMD3Q8N6K7 520 aa20.43■□□□□ 0.86
SHANK1-203ENST00000391813 OR6J1Q8NGC5 347 aa20.43■□□□□ 0.86
SHANK1-203ENST00000391813 NCOA4Q13772 614 aa20.43■□□□□ 0.86
SHANK1-203ENST00000391813 CNGA2Q16280 664 aa20.43■□□□□ 0.86
SHANK1-203ENST00000391813 NT5DC3Q86UY8 548 aa20.43■□□□□ 0.86
SHANK1-203ENST00000391813 IQCKQ8N0W5 287 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms