RNA–Protein interactions for RNA: ENST00000390497.1

TRAJ40-201, Transcript of T cell receptor alpha joining 40, humanhuman

APPRIS P1 BASIC

Gene TRAJ40, Length 61 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ40-201ENST00000390497 LRRC56Q8IYG6 542 aaPredicted RBP3.43□□□□□ -1.86
TRAJ40-201ENST00000390497 MB21D1Q8N884 522 aa3.43□□□□□ -1.86
TRAJ40-201ENST00000390497 OR56A1Q8NGH5 318 aa3.43□□□□□ -1.86
TRAJ40-201ENST00000390497 SPPL3Q8TCT6 385 aa3.43□□□□□ -1.86
TRAJ40-201ENST00000390497 BPIFB1Q8TDL5 484 aa3.43□□□□□ -1.86
TRAJ40-201ENST00000390497 EDAQ92838 391 aa3.43□□□□□ -1.86
TRAJ40-201ENST00000390497 C18orf8Q96DM3 657 aa3.43□□□□□ -1.86
TRAJ40-201ENST00000390497 OSBPL9Q96SU4 736 aa3.43□□□□□ -1.86
TRAJ40-201ENST00000390497 TLR10Q9BXR5 811 aa3.43□□□□□ -1.86
TRAJ40-201ENST00000390497 SLC46A2Q9BY10 475 aa3.43□□□□□ -1.86
TRAJ40-201ENST00000390497 CTTNBP2NLQ9P2B4 639 aa3.43□□□□□ -1.86
TRAJ40-201ENST00000390497 IGSF9Q9P2J2 1179 aa3.43□□□□□ -1.86
TRAJ40-201ENST00000390497 PDP2Q9P2J9 529 aa3.43□□□□□ -1.86
TRAJ40-201ENST00000390497 GRHPRQ9UBQ7 328 aa3.43□□□□□ -1.86
TRAJ40-201ENST00000390497 DNAJB11Q9UBS4 358 aa3.43□□□□□ -1.86
TRAJ40-201ENST00000390497 EIF2B4Q9UI10 523 aaKnown RBP3.43□□□□□ -1.86
TRAJ40-201ENST00000390497 KCNE5Q9UJ90 142 aa3.43□□□□□ -1.86
TRAJ40-201ENST00000390497 SLC13A4Q9UKG4 626 aa3.43□□□□□ -1.86
TRAJ40-201ENST00000390497 GJD2Q9UKL4 321 aa3.43□□□□□ -1.86
TRAJ40-201ENST00000390497 NFU1Q9UMS0 254 aa3.43□□□□□ -1.86
TRAJ40-201ENST00000390497 MTO1Q9Y2Z2 717 aaKnown RBP3.43□□□□□ -1.86
TRAJ40-201ENST00000390497 DTNAQ9Y4J8 743 aa3.43□□□□□ -1.86
TRAJ40-201ENST00000390497 FPGT-TNNI3KV9GXZ4 949 aa3.43□□□□□ -1.86
TRAJ40-201ENST00000390497 A0A087WZ62 844 aa3.42□□□□□ -1.86
TRAJ40-201ENST00000390497 A0A1B0GVC2 190 aa3.42□□□□□ -1.86
TRAJ40-201ENST00000390497 KRTAP23-1A1A580 65 aa3.42□□□□□ -1.86
TRAJ40-201ENST00000390497 EFCAB8A8MWE9 144 aa3.42□□□□□ -1.86
TRAJ40-201ENST00000390497 PATE3B3GLJ2 98 aa3.42□□□□□ -1.86
TRAJ40-201ENST00000390497 PRRT4C9JH25 899 aa3.42□□□□□ -1.86
TRAJ40-201ENST00000390497 TOR1BO14657 336 aa3.42□□□□□ -1.86
TRAJ40-201ENST00000390497 FOXS1O43638 330 aa3.42□□□□□ -1.86
TRAJ40-201ENST00000390497 RRP9O43818 475 aaKnown RBP3.42□□□□□ -1.86
TRAJ40-201ENST00000390497 ZNF623O75123 536 aa3.42□□□□□ -1.86
TRAJ40-201ENST00000390497 FAM155BO75949 473 aa3.42□□□□□ -1.86
TRAJ40-201ENST00000390497 SUN1O94901 812 aa3.42□□□□□ -1.86
TRAJ40-201ENST00000390497 VIPP01282 170 aa3.42□□□□□ -1.86
TRAJ40-201ENST00000390497 SRGAP2BP0DMP2 458 aa3.42□□□□□ -1.86
TRAJ40-201ENST00000390497 CD19P15391 556 aa3.42□□□□□ -1.86
TRAJ40-201ENST00000390497 CFPP27918 469 aa3.42□□□□□ -1.86
TRAJ40-201ENST00000390497 CST5P28325 142 aaPredicted RBP3.42□□□□□ -1.86
TRAJ40-201ENST00000390497 CNR2P34972 360 aa3.42□□□□□ -1.86
TRAJ40-201ENST00000390497 ALDH18A1P54886 795 aaKnown RBP3.42□□□□□ -1.86
TRAJ40-201ENST00000390497 LILRA4P59901 499 aa3.42□□□□□ -1.86
TRAJ40-201ENST00000390497 AP2B1P63010 937 aa3.42□□□□□ -1.86
TRAJ40-201ENST00000390497 MYO1EQ12965 1108 aa3.42□□□□□ -1.86
TRAJ40-201ENST00000390497 ATP1A4Q13733 1029 aa3.42□□□□□ -1.86
TRAJ40-201ENST00000390497 BOP1Q14137 746 aaKnown RBP3.42□□□□□ -1.86
TRAJ40-201ENST00000390497 POSTNQ15063 836 aa3.42□□□□□ -1.86
TRAJ40-201ENST00000390497 CERCAMQ5T4B2 595 aa3.42□□□□□ -1.86
TRAJ40-201ENST00000390497 TMTC4Q5T4D3 741 aa3.42□□□□□ -1.86
TRAJ40-201ENST00000390497 INTS11Q5TA45 600 aaKnown RBP3.42□□□□□ -1.86
TRAJ40-201ENST00000390497 MANEALQ5VSG8 457 aa3.42□□□□□ -1.86
TRAJ40-201ENST00000390497 CACHD1Q5VU97 1274 aa3.42□□□□□ -1.86
TRAJ40-201ENST00000390497 JAKMIP3Q5VZ66 844 aa3.42□□□□□ -1.86
TRAJ40-201ENST00000390497 RAP1GAP2Q684P5 730 aa3.42□□□□□ -1.86
TRAJ40-201ENST00000390497 TMEM108Q6UXF1 575 aa3.42□□□□□ -1.86
TRAJ40-201ENST00000390497 TMPRSS9Q7Z410 1059 aa3.42□□□□□ -1.86
TRAJ40-201ENST00000390497 GDF7Q7Z4P5 450 aa3.42□□□□□ -1.86
TRAJ40-201ENST00000390497 RAB11FIP4Q86YS3 637 aa3.42□□□□□ -1.86
TRAJ40-201ENST00000390497 MAPKAPK5Q8IW41 473 aa3.42□□□□□ -1.86
TRAJ40-201ENST00000390497 CCDC28AQ8IWP9 274 aa3.42□□□□□ -1.86
TRAJ40-201ENST00000390497 SLC15A3Q8IY34 581 aa3.42□□□□□ -1.86
TRAJ40-201ENST00000390497 TMEM132CQ8N3T6 1108 aa3.42□□□□□ -1.86
TRAJ40-201ENST00000390497 Q8NA96 180 aa3.42□□□□□ -1.86
TRAJ40-201ENST00000390497 NAXEQ8NCW5 288 aa3.42□□□□□ -1.86
TRAJ40-201ENST00000390497 NSUN7Q8NE18 718 aaKnown RBP3.42□□□□□ -1.86
TRAJ40-201ENST00000390497 OR6Y1Q8NGX8 325 aa3.42□□□□□ -1.86
TRAJ40-201ENST00000390497 STT3BQ8TCJ2 826 aa3.42□□□□□ -1.86
TRAJ40-201ENST00000390497 ZNF483Q8TF39 744 aaPredicted RBP3.42□□□□□ -1.86
TRAJ40-201ENST00000390497 UBXN10Q96LJ8 280 aa3.42□□□□□ -1.86
TRAJ40-201ENST00000390497 DDX23Q9BUQ8 820 aaKnown RBP3.42□□□□□ -1.86
TRAJ40-201ENST00000390497 TP63Q9H3D4 680 aaPredicted RBP3.42□□□□□ -1.86
TRAJ40-201ENST00000390497 ZHX3Q9H4I2 956 aa3.42□□□□□ -1.86
TRAJ40-201ENST00000390497 SEPSECSQ9HD40 501 aaKnown RBP3.42□□□□□ -1.86
TRAJ40-201ENST00000390497 ITM2CQ9NQX7 267 aa3.42□□□□□ -1.86
TRAJ40-201ENST00000390497 TMEM74BQ9NUR3 256 aa3.42□□□□□ -1.86
TRAJ40-201ENST00000390497 PNMA2Q9UL42 364 aa3.42□□□□□ -1.86
TRAJ40-201ENST00000390497 NDRG4Q9ULP0 352 aaKnown RBP3.42□□□□□ -1.86
TRAJ40-201ENST00000390497 HPSEQ9Y251 543 aa3.42□□□□□ -1.86
TRAJ40-201ENST00000390497 NOX1Q9Y5S8 564 aa3.42□□□□□ -1.86
TRAJ40-201ENST00000390497 DUSP10Q9Y6W6 482 aa3.42□□□□□ -1.86
TRAJ40-201ENST00000390497 LEFTY2O00292 366 aa3.41□□□□□ -1.86
TRAJ40-201ENST00000390497 IPO5O00410 1097 aaKnown RBP3.41□□□□□ -1.86
TRAJ40-201ENST00000390497 RNASET2O00584 256 aaKnown RBP3.41□□□□□ -1.86
TRAJ40-201ENST00000390497 GPR42O15529 346 aa3.41□□□□□ -1.86
TRAJ40-201ENST00000390497 ZSCAN9O15535 394 aaPredicted RBP3.41□□□□□ -1.86
TRAJ40-201ENST00000390497 RPS6KA4O75676 772 aa3.41□□□□□ -1.86
TRAJ40-201ENST00000390497 ANXA6P08133 673 aa3.41□□□□□ -1.86
TRAJ40-201ENST00000390497 VEGFAP15692 232 aaPredicted RBP3.41□□□□□ -1.86
TRAJ40-201ENST00000390497 BMP7P18075 431 aa3.41□□□□□ -1.86
TRAJ40-201ENST00000390497 FGFR4P22455 802 aa3.41□□□□□ -1.86
TRAJ40-201ENST00000390497 EPHA3P29320 983 aa3.41□□□□□ -1.86
TRAJ40-201ENST00000390497 APOBEC3AP31941 199 aaPredicted RBP3.41□□□□□ -1.86
TRAJ40-201ENST00000390497 ZEB1P37275 1124 aaPredicted RBP3.41□□□□□ -1.86
TRAJ40-201ENST00000390497 NPTX2P47972 431 aa3.41□□□□□ -1.86
TRAJ40-201ENST00000390497 AARSP49588 968 aaKnown RBP eCLIP3.41□□□□□ -1.86
TRAJ40-201ENST00000390497 NDUFV1P49821 464 aa3.41□□□□□ -1.86
TRAJ40-201ENST00000390497 GATMP50440 423 aa3.41□□□□□ -1.86
TRAJ40-201ENST00000390497 CDK7P50613 346 aa3.41□□□□□ -1.86
TRAJ40-201ENST00000390497 PAPOLAP51003 745 aaKnown RBP3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms