RNA–Protein interactions for RNA: ENST00000390468.1

TRAV41-201, Transcript of T cell receptor alpha variable 41, humanhuman

APPRIS P1 BASIC

Gene TRAV41, Length 336 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41-201ENST00000390468 POLR2FP61218 127 aaKnown RBP2.78□□□□□ -1.96
TRAV41-201ENST00000390468 VSNL1P62760 191 aa2.78□□□□□ -1.96
TRAV41-201ENST00000390468 CTAG1AP78358 180 aa2.78□□□□□ -1.96
TRAV41-201ENST00000390468 OLR1P78380 273 aa2.78□□□□□ -1.96
TRAV41-201ENST00000390468 HPCAP84074 193 aa2.78□□□□□ -1.96
TRAV41-201ENST00000390468 GABPAQ06546 454 aa2.78□□□□□ -1.96
TRAV41-201ENST00000390468 CXCL9Q07325 125 aa2.78□□□□□ -1.96
TRAV41-201ENST00000390468 TMEM62Q0P6H9 643 aa2.78□□□□□ -1.96
TRAV41-201ENST00000390468 BNIP1Q12981 228 aa2.78□□□□□ -1.96
TRAV41-201ENST00000390468 ITGB3BPQ13352 177 aaPredicted RBP2.78□□□□□ -1.96
TRAV41-201ENST00000390468 PDCLQ13371 301 aa2.78□□□□□ -1.96
TRAV41-201ENST00000390468 ADAM9Q13443 819 aa2.78□□□□□ -1.96
TRAV41-201ENST00000390468 DCTN2Q13561 401 aaKnown RBP2.78□□□□□ -1.96
TRAV41-201ENST00000390468 ITIH4Q14624 930 aa2.78□□□□□ -1.96
TRAV41-201ENST00000390468 GRM4Q14833 912 aa2.78□□□□□ -1.96
TRAV41-201ENST00000390468 PSMD6Q15008 389 aa2.78□□□□□ -1.96
TRAV41-201ENST00000390468 TAF1CQ15572 869 aaPredicted RBP2.78□□□□□ -1.96
TRAV41-201ENST00000390468 CAMK4Q16566 473 aa2.78□□□□□ -1.96
TRAV41-201ENST00000390468 TRIM71Q2Q1W2 868 aaKnown RBP2.78□□□□□ -1.96
TRAV41-201ENST00000390468 P3H1Q32P28 736 aa2.78□□□□□ -1.96
TRAV41-201ENST00000390468 CERKLQ49MI3 558 aaPredicted RBP2.78□□□□□ -1.96
TRAV41-201ENST00000390468 GLE1Q53GS7 698 aaKnown RBP2.78□□□□□ -1.96
TRAV41-201ENST00000390468 HSP90AA5PQ58FG0 334 aa2.78□□□□□ -1.96
TRAV41-201ENST00000390468 RPS26P11Q5JNZ5 115 aaPredicted RBP2.78□□□□□ -1.96
TRAV41-201ENST00000390468 CEP78Q5JTW2 689 aa2.78□□□□□ -1.96
TRAV41-201ENST00000390468 ZBTB41Q5SVQ8 909 aa2.78□□□□□ -1.96
TRAV41-201ENST00000390468 MAP3K21Q5TCX8 1036 aa2.78□□□□□ -1.96
TRAV41-201ENST00000390468 DAB2IPQ5VWQ8 1189 aa2.78□□□□□ -1.96
TRAV41-201ENST00000390468 PPP4R3AQ6IN85 833 aa2.78□□□□□ -1.96
TRAV41-201ENST00000390468 NEPROQ6NW34 567 aa2.78□□□□□ -1.96
TRAV41-201ENST00000390468 CCDC62Q6P9F0 684 aa2.78□□□□□ -1.96
TRAV41-201ENST00000390468 EMBQ6PCB8 327 aa2.78□□□□□ -1.96
TRAV41-201ENST00000390468 TRIM65Q6PJ69 517 aa2.78□□□□□ -1.96
TRAV41-201ENST00000390468 SLC2A7Q6PXP3 512 aa2.78□□□□□ -1.96
TRAV41-201ENST00000390468 CYP26C1Q6V0L0 522 aa2.78□□□□□ -1.96
TRAV41-201ENST00000390468 TMTC3Q6ZXV5 915 aa2.78□□□□□ -1.96
TRAV41-201ENST00000390468 CPLX4Q7Z7G2 160 aa2.78□□□□□ -1.96
TRAV41-201ENST00000390468 PDZD3Q86UT5 571 aa2.78□□□□□ -1.96
TRAV41-201ENST00000390468 FERMT3Q86UX7 667 aa2.78□□□□□ -1.96
TRAV41-201ENST00000390468 FAM228AQ86W67 206 aa2.78□□□□□ -1.96
TRAV41-201ENST00000390468 DGKHQ86XP1 1220 aa2.78□□□□□ -1.96
TRAV41-201ENST00000390468 SIAH1Q8IUQ4 282 aa2.78□□□□□ -1.96
TRAV41-201ENST00000390468 APOBEC3FQ8IUX4 373 aaKnown RBP2.78□□□□□ -1.96
TRAV41-201ENST00000390468 PASD1Q8IV76 773 aa2.78□□□□□ -1.96
TRAV41-201ENST00000390468 RHOT2Q8IXI1 618 aa2.78□□□□□ -1.96
TRAV41-201ENST00000390468 CKAP2LQ8IYA6 745 aa2.78□□□□□ -1.96
TRAV41-201ENST00000390468 LSMEM2Q8N112 164 aa2.78□□□□□ -1.96
TRAV41-201ENST00000390468 LRRC47Q8N1G4 583 aaKnown RBP2.78□□□□□ -1.96
TRAV41-201ENST00000390468 ARL6IP6Q8N6S5 226 aa2.78□□□□□ -1.96
TRAV41-201ENST00000390468 TRIML2Q8N7C3 387 aa2.78□□□□□ -1.96
TRAV41-201ENST00000390468 FANCBQ8NB91 859 aa2.78□□□□□ -1.96
TRAV41-201ENST00000390468 GOLM1Q8NBJ4 401 aa2.78□□□□□ -1.96
TRAV41-201ENST00000390468 CCDC197Q8NCU1 140 aa2.78□□□□□ -1.96
TRAV41-201ENST00000390468 GSDMBQ8TAX9 411 aa2.78□□□□□ -1.96
TRAV41-201ENST00000390468 ABHD4Q8TB40 342 aa2.78□□□□□ -1.96
TRAV41-201ENST00000390468 MYCBPAPQ8TBZ2 947 aa2.78□□□□□ -1.96
TRAV41-201ENST00000390468 ANKRD49Q8WVL7 239 aa2.78□□□□□ -1.96
TRAV41-201ENST00000390468 FAM151AQ8WW52 585 aa2.78□□□□□ -1.96
TRAV41-201ENST00000390468 DHX38Q92620 1227 aaKnown RBP2.78□□□□□ -1.96
TRAV41-201ENST00000390468 PHKBQ93100 1093 aa2.78□□□□□ -1.96
TRAV41-201ENST00000390468 ELMO3Q96BJ8 720 aa2.78□□□□□ -1.96
TRAV41-201ENST00000390468 DHX58Q96C10 678 aa2.78□□□□□ -1.96
TRAV41-201ENST00000390468 ARMC5Q96C12 935 aa2.78□□□□□ -1.96
TRAV41-201ENST00000390468 CLIP3Q96DZ5 547 aa2.78□□□□□ -1.96
TRAV41-201ENST00000390468 CYFIP2Q96F07 1278 aa2.78□□□□□ -1.96
TRAV41-201ENST00000390468 CEP95Q96GE4 821 aa2.78□□□□□ -1.96
TRAV41-201ENST00000390468 VPS50Q96JG6 964 aa2.78□□□□□ -1.96
TRAV41-201ENST00000390468 CDHR1Q96JP9 859 aa2.78□□□□□ -1.96
TRAV41-201ENST00000390468 PRMT6Q96LA8 375 aaPredicted RBP2.78□□□□□ -1.96
TRAV41-201ENST00000390468 RNPC3Q96LT9 517 aaKnown RBP2.78□□□□□ -1.96
TRAV41-201ENST00000390468 CCDC17Q96LX7 622 aa2.78□□□□□ -1.96
TRAV41-201ENST00000390468 CCT8L2Q96SF2 557 aa2.78□□□□□ -1.96
TRAV41-201ENST00000390468 HNRNPABQ99729 332 aaKnown RBP2.78□□□□□ -1.96
TRAV41-201ENST00000390468 NAPGQ99747 312 aaPredicted RBP2.78□□□□□ -1.96
TRAV41-201ENST00000390468 MIPEPQ99797 713 aa2.78□□□□□ -1.96
TRAV41-201ENST00000390468 SH3GL2Q99962 352 aa2.78□□□□□ -1.96
TRAV41-201ENST00000390468 TMEM47Q9BQJ4 181 aa2.78□□□□□ -1.96
TRAV41-201ENST00000390468 SYT17Q9BSW7 474 aa2.78□□□□□ -1.96
TRAV41-201ENST00000390468 ALG1Q9BT22 464 aa2.78□□□□□ -1.96
TRAV41-201ENST00000390468 HAUS8Q9BT25 410 aa2.78□□□□□ -1.96
TRAV41-201ENST00000390468 SELENOOQ9BVL4 669 aa2.78□□□□□ -1.96
TRAV41-201ENST00000390468 TIPINQ9BVW5 301 aa2.78□□□□□ -1.96
TRAV41-201ENST00000390468 RNF26Q9BY78 433 aaPredicted RBP2.78□□□□□ -1.96
TRAV41-201ENST00000390468 FTOQ9C0B1 505 aaKnown RBP eCLIP2.78□□□□□ -1.96
TRAV41-201ENST00000390468 KLHL4Q9C0H6 718 aa2.78□□□□□ -1.96
TRAV41-201ENST00000390468 ZHX3Q9H4I2 956 aa2.78□□□□□ -1.96
TRAV41-201ENST00000390468 XPO5Q9HAV4 1204 aaKnown RBP eCLIP2.78□□□□□ -1.96
TRAV41-201ENST00000390468 CABP5Q9NP86 173 aa2.78□□□□□ -1.96
TRAV41-201ENST00000390468 MYOZ2Q9NPC6 264 aa2.78□□□□□ -1.96
TRAV41-201ENST00000390468 AASDHPPTQ9NRN7 309 aa2.78□□□□□ -1.96
TRAV41-201ENST00000390468 TCP11L1Q9NUJ3 509 aa2.78□□□□□ -1.96
TRAV41-201ENST00000390468 C19orf73Q9NVV2 129 aa2.78□□□□□ -1.96
TRAV41-201ENST00000390468 GID8Q9NWU2 228 aa2.78□□□□□ -1.96
TRAV41-201ENST00000390468 DACT1Q9NYF0 836 aa2.78□□□□□ -1.96
TRAV41-201ENST00000390468 DLGAP2Q9P1A6 1054 aa2.78□□□□□ -1.96
TRAV41-201ENST00000390468 FAM8A1Q9UBU6 413 aa2.78□□□□□ -1.96
TRAV41-201ENST00000390468 ZNF70Q9UC06 446 aaPredicted RBP2.78□□□□□ -1.96
TRAV41-201ENST00000390468 HERC5Q9UII4 1024 aaKnown RBP2.78□□□□□ -1.96
TRAV41-201ENST00000390468 GGT7Q9UJ14 662 aa2.78□□□□□ -1.96
TRAV41-201ENST00000390468 ACAD8Q9UKU7 415 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms