RNA–Protein interactions for RNA: ENST00000390457.2

TRAV27-201, Transcript of T cell receptor alpha variable 27, humanhuman

APPRIS P1 BASIC

Gene TRAV27, Length 425 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27-201ENST00000390457 RASSF3Q86WH2 238 aa7.55□□□□□ -1.2
TRAV27-201ENST00000390457 METTL23Q86XA0 190 aa7.55□□□□□ -1.2
TRAV27-201ENST00000390457 DCP1BQ8IZD4 617 aaKnown RBP7.55□□□□□ -1.2
TRAV27-201ENST00000390457 PDCL2Q8N4E4 241 aa7.55□□□□□ -1.2
TRAV27-201ENST00000390457 C1orf127Q8N9H9 656 aa7.55□□□□□ -1.2
TRAV27-201ENST00000390457 KDF1Q8NAX2 398 aaPredicted RBP7.55□□□□□ -1.2
TRAV27-201ENST00000390457 ZSWIM2Q8NEG5 633 aa7.55□□□□□ -1.2
TRAV27-201ENST00000390457 RPLP0P6Q8NHW5 317 aa7.55□□□□□ -1.2
TRAV27-201ENST00000390457 OSCP1Q8WVF1 389 aa7.55□□□□□ -1.2
TRAV27-201ENST00000390457 MRPS31Q92665 395 aaKnown RBP7.55□□□□□ -1.2
TRAV27-201ENST00000390457 RAD54LQ92698 747 aa7.55□□□□□ -1.2
TRAV27-201ENST00000390457 CDK5RAP3Q96JB5 506 aa7.55□□□□□ -1.2
TRAV27-201ENST00000390457 CYP2S1Q96SQ9 504 aa7.55□□□□□ -1.2
TRAV27-201ENST00000390457 ACBD6Q9BR61 282 aa7.55□□□□□ -1.2
TRAV27-201ENST00000390457 PI4K2AQ9BTU6 479 aa7.55□□□□□ -1.2
TRAV27-201ENST00000390457 TMEM206Q9H813 350 aa7.55□□□□□ -1.2
TRAV27-201ENST00000390457 GDAP2Q9NXN4 497 aa7.55□□□□□ -1.2
TRAV27-201ENST00000390457 RALYQ9UKM9 306 aaKnown RBP7.55□□□□□ -1.2
TRAV27-201ENST00000390457 ASXL3Q9C0F0 2248 aa7.55□□□□□ -1.2
TRAV27-201ENST00000390457 LNP1A1A4G5 178 aa7.54□□□□□ -1.2
TRAV27-201ENST00000390457 C4orf47A7E2U8 309 aa7.54□□□□□ -1.2
TRAV27-201ENST00000390457 C1QTNF9BB2RNN3 333 aa7.54□□□□□ -1.2
TRAV27-201ENST00000390457 K7EQS6 105 aa7.54□□□□□ -1.2
TRAV27-201ENST00000390457 PRPF40AO75400 957 aaKnown RBP7.54□□□□□ -1.2
TRAV27-201ENST00000390457 RHOBTB1O94844 696 aa7.54□□□□□ -1.2
TRAV27-201ENST00000390457 IL18RAPO95256 599 aa7.54□□□□□ -1.2
TRAV27-201ENST00000390457 CAVIN2O95810 425 aa7.54□□□□□ -1.2
TRAV27-201ENST00000390457 C1QTNF9P0C862 333 aa7.54□□□□□ -1.2
TRAV27-201ENST00000390457 HNRNPLP14866 589 aaKnown RBP eCLIP7.54□□□□□ -1.2
TRAV27-201ENST00000390457 DDIT3P35638 169 aa7.54□□□□□ -1.2
TRAV27-201ENST00000390457 LONP1P36776 959 aaKnown RBP7.54□□□□□ -1.2
TRAV27-201ENST00000390457 OPRD1P41143 372 aa7.54□□□□□ -1.2
TRAV27-201ENST00000390457 UBA7P41226 1012 aa7.54□□□□□ -1.2
TRAV27-201ENST00000390457 PNPLA4P41247 253 aa7.54□□□□□ -1.2
TRAV27-201ENST00000390457 KCNA1Q09470 495 aa7.54□□□□□ -1.2
TRAV27-201ENST00000390457 DHX8Q14562 1220 aaKnown RBP7.54□□□□□ -1.2
TRAV27-201ENST00000390457 KARSQ15046 597 aaKnown RBP7.54□□□□□ -1.2
TRAV27-201ENST00000390457 TAF12Q16514 161 aa7.54□□□□□ -1.2
TRAV27-201ENST00000390457 SV2CQ496J9 727 aa7.54□□□□□ -1.2
TRAV27-201ENST00000390457 INTS6LQ5JSJ4 861 aaKnown RBP7.54□□□□□ -1.2
TRAV27-201ENST00000390457 PSAPL1Q6NUJ1 521 aa7.54□□□□□ -1.2
TRAV27-201ENST00000390457 FAM171BQ6P995 826 aa7.54□□□□□ -1.2
TRAV27-201ENST00000390457 BRSK2Q8IWQ3 736 aa7.54□□□□□ -1.2
TRAV27-201ENST00000390457 CPA6Q8N4T0 437 aa7.54□□□□□ -1.2
TRAV27-201ENST00000390457 LRRC52Q8N7C0 313 aa7.54□□□□□ -1.2
TRAV27-201ENST00000390457 OLIG1Q8TAK6 271 aa7.54□□□□□ -1.2
TRAV27-201ENST00000390457 SPATA18Q8TC71 538 aa7.54□□□□□ -1.2
TRAV27-201ENST00000390457 USP33Q8TEY7 942 aa7.54□□□□□ -1.2
TRAV27-201ENST00000390457 CD101Q93033 1021 aa7.54□□□□□ -1.2
TRAV27-201ENST00000390457 HVCN1Q96D96 273 aa7.54□□□□□ -1.2
TRAV27-201ENST00000390457 DNAJC19Q96DA6 116 aa7.54□□□□□ -1.2
TRAV27-201ENST00000390457 CALML4Q96GE6 196 aa7.54□□□□□ -1.2
TRAV27-201ENST00000390457 FAM84AQ96KN4 292 aa7.54□□□□□ -1.2
TRAV27-201ENST00000390457 EDEM2Q9BV94 578 aa7.54□□□□□ -1.2
TRAV27-201ENST00000390457 ZMYND15Q9H091 742 aa7.54□□□□□ -1.2
TRAV27-201ENST00000390457 LINC00597Q9H2U6 94 aa7.54□□□□□ -1.2
TRAV27-201ENST00000390457 UXTQ9UBK9 157 aaPredicted RBP7.54□□□□□ -1.2
TRAV27-201ENST00000390457 SIX4Q9UIU6 781 aa7.54□□□□□ -1.2
TRAV27-201ENST00000390457 GTF3C4Q9UKN8 822 aa7.54□□□□□ -1.2
TRAV27-201ENST00000390457 MAGED2Q9UNF1 606 aaPredicted RBP7.54□□□□□ -1.2
TRAV27-201ENST00000390457 WNT6Q9Y6F9 365 aa7.54□□□□□ -1.2
TRAV27-201ENST00000390457 CABIN1Q9Y6J0 2220 aa7.54□□□□□ -1.2
TRAV27-201ENST00000390457 A0A0A0MRY4 1105 aa7.53□□□□□ -1.2
TRAV27-201ENST00000390457 C2orf78A6NCI8 922 aa7.53□□□□□ -1.2
TRAV27-201ENST00000390457 HCRTO43612 131 aa7.53□□□□□ -1.2
TRAV27-201ENST00000390457 TOP3BO95985 862 aaKnown RBP7.53□□□□□ -1.2
TRAV27-201ENST00000390457 USP17L7P0C7H9 530 aa7.53□□□□□ -1.2
TRAV27-201ENST00000390457 CSRP1P21291 193 aaKnown RBP7.53□□□□□ -1.2
TRAV27-201ENST00000390457 BCKDHBP21953 392 aa7.53□□□□□ -1.2
TRAV27-201ENST00000390457 ACAT1P24752 427 aaKnown RBP7.53□□□□□ -1.2
TRAV27-201ENST00000390457 POLR2BP30876 1174 aaKnown RBP7.53□□□□□ -1.2
TRAV27-201ENST00000390457 MAGEA11P43364 429 aa7.53□□□□□ -1.2
TRAV27-201ENST00000390457 NOVA1P51513 510 aaKnown RBP7.53□□□□□ -1.2
TRAV27-201ENST00000390457 RPL10AP62906 217 aaKnown RBP7.53□□□□□ -1.2
TRAV27-201ENST00000390457 TSPY1Q01534 308 aa7.53□□□□□ -1.2
TRAV27-201ENST00000390457 CREB5Q02930 508 aa7.53□□□□□ -1.2
TRAV27-201ENST00000390457 MESP2Q0VG99 397 aa7.53□□□□□ -1.2
TRAV27-201ENST00000390457 POSTNQ15063 836 aa7.53□□□□□ -1.2
TRAV27-201ENST00000390457 ELF2Q15723 593 aa7.53□□□□□ -1.2
TRAV27-201ENST00000390457 SOWAHAQ2M3V2 549 aa7.53□□□□□ -1.2
TRAV27-201ENST00000390457 MCTP1Q6DN14 999 aa7.53□□□□□ -1.2
TRAV27-201ENST00000390457 CC2D1AQ6P1N0 951 aaPredicted RBP7.53□□□□□ -1.2
TRAV27-201ENST00000390457 UNQ6494/PRO21346Q6UXR6 183 aa7.53□□□□□ -1.2
TRAV27-201ENST00000390457 USP49Q70CQ1 688 aa7.53□□□□□ -1.2
TRAV27-201ENST00000390457 SFR1Q86XK3 245 aa7.53□□□□□ -1.2
TRAV27-201ENST00000390457 TMEM86AQ8N2M4 240 aa7.53□□□□□ -1.2
TRAV27-201ENST00000390457 KIAA1958Q8N8K9 716 aa7.53□□□□□ -1.2
TRAV27-201ENST00000390457 SH3RF2Q8TEC5 729 aa7.53□□□□□ -1.2
TRAV27-201ENST00000390457 LARP4BQ92615 738 aaKnown RBP7.53□□□□□ -1.2
TRAV27-201ENST00000390457 GATA6Q92908 595 aa7.53□□□□□ -1.2
TRAV27-201ENST00000390457 ATP2A3Q93084 1043 aa7.53□□□□□ -1.2
TRAV27-201ENST00000390457 ACDQ96AP0 544 aa7.53□□□□□ -1.2
TRAV27-201ENST00000390457 FUBP3Q96I24 572 aaKnown RBP eCLIP7.53□□□□□ -1.2
TRAV27-201ENST00000390457 CNOT6LQ96LI5 555 aaKnown RBP7.53□□□□□ -1.2
TRAV27-201ENST00000390457 ZNF560Q96MR9 790 aa7.53□□□□□ -1.2
TRAV27-201ENST00000390457 TTLL2Q9BWV7 592 aa7.53□□□□□ -1.2
TRAV27-201ENST00000390457 DUS2Q9NX74 493 aaKnown RBP7.53□□□□□ -1.2
TRAV27-201ENST00000390457 DDX43Q9NXZ2 648 aaKnown RBP7.53□□□□□ -1.2
TRAV27-201ENST00000390457 PPP4R2Q9NY27 417 aa7.53□□□□□ -1.2
TRAV27-201ENST00000390457 MMP17Q9ULZ9 603 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms