RNA–Protein interactions for RNA: ENST00000389194.6

LTN1-202, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-202ENST00000389194 HNRNPLLQ8WVV9 542 aaKnown RBP5.2□□□□□ -1.58
LTN1-202ENST00000389194 ZNF512Q96ME7 567 aaPredicted RBP5.2□□□□□ -1.58
LTN1-202ENST00000389194 PGLYRP2Q96PD5 576 aa5.2□□□□□ -1.58
LTN1-202ENST00000389194 CARD9Q9H257 536 aa5.2□□□□□ -1.58
LTN1-202ENST00000389194 CAAP1Q9H8G2 361 aa5.2□□□□□ -1.58
LTN1-202ENST00000389194 COG4Q9H9E3 785 aa5.2□□□□□ -1.58
LTN1-202ENST00000389194 ADGRB1O14514 1584 aa5.19□□□□□ -1.58
LTN1-202ENST00000389194 CFAP73A6NFT4 308 aa5.19□□□□□ -1.58
LTN1-202ENST00000389194 TADA2AO75478 443 aa5.19□□□□□ -1.58
LTN1-202ENST00000389194 HNRNPCP07910 306 aaKnown RBP eCLIP5.19□□□□□ -1.587e-7■■■■□ 21.6
LTN1-202ENST00000389194 KPNA2P52292 529 aaKnown RBP5.19□□□□□ -1.58
LTN1-202ENST00000389194 GEMIN4P57678 1058 aaKnown RBP5.19□□□□□ -1.58
LTN1-202ENST00000389194 FSTL1Q12841 308 aa5.19□□□□□ -1.58
LTN1-202ENST00000389194 PDAP1Q13442 181 aaKnown RBP5.19□□□□□ -1.58
LTN1-202ENST00000389194 PKN2Q16513 984 aaKnown RBP5.19□□□□□ -1.58
LTN1-202ENST00000389194 AGBL2Q5U5Z8 902 aa5.19□□□□□ -1.58
LTN1-202ENST00000389194 SPOCD1Q6ZMY3 1216 aa5.19□□□□□ -1.58
LTN1-202ENST00000389194 TFAP2DQ7Z6R9 452 aa5.19□□□□□ -1.58
LTN1-202ENST00000389194 PHF21BQ96EK2 531 aa5.19□□□□□ -1.58
LTN1-202ENST00000389194 PAFAH2Q99487 392 aa5.19□□□□□ -1.58
LTN1-202ENST00000389194 C12orf65Q9H3J6 166 aaKnown RBP5.19□□□□□ -1.58
LTN1-202ENST00000389194 DPP3Q9NY33 737 aa5.19□□□□□ -1.58
LTN1-202ENST00000389194 KIF17Q9P2E2 1029 aa5.19□□□□□ -1.58
LTN1-202ENST00000389194 ATP8B3O60423 1300 aa5.19□□□□□ -1.58
LTN1-202ENST00000389194 PJA2O43164 708 aa5.19□□□□□ -1.58
LTN1-202ENST00000389194 SNRPAP09012 282 aaKnown RBP5.19□□□□□ -1.58
LTN1-202ENST00000389194 TGM2P21980 687 aa5.19□□□□□ -1.58
LTN1-202ENST00000389194 HSD17B4P51659 736 aa5.19□□□□□ -1.58
LTN1-202ENST00000389194 EFNA5P52803 228 aa5.19□□□□□ -1.58
LTN1-202ENST00000389194 PPP4CP60510 307 aa5.19□□□□□ -1.58
LTN1-202ENST00000389194 NFIL3Q16649 462 aa5.19□□□□□ -1.58
LTN1-202ENST00000389194 GALNTL6Q49A17 601 aa5.19□□□□□ -1.58
LTN1-202ENST00000389194 MFSD7Q6UXD7 560 aa5.19□□□□□ -1.58
LTN1-202ENST00000389194 KDM7AQ6ZMT4 941 aa5.19□□□□□ -1.58
LTN1-202ENST00000389194 ANO5Q75V66 913 aa5.19□□□□□ -1.58
LTN1-202ENST00000389194 CACUL1Q86Y37 369 aa5.19□□□□□ -1.58
LTN1-202ENST00000389194 RXFP2Q8WXD0 754 aa5.19□□□□□ -1.58
LTN1-202ENST00000389194 CAPN10Q9HC96 672 aa5.19□□□□□ -1.58
LTN1-202ENST00000389194 IL1RAPL1Q9NZN1 696 aa5.19□□□□□ -1.58
LTN1-202ENST00000389194 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.19□□□□□ -1.58
LTN1-202ENST00000389194 DIP2CQ9Y2E4 1556 aa5.19□□□□□ -1.58
LTN1-202ENST00000389194 BUD23O43709 281 aaKnown RBP5.19□□□□□ -1.58
LTN1-202ENST00000389194 ATP5HO75947 161 aa5.19□□□□□ -1.58
LTN1-202ENST00000389194 SREBF1P36956 1147 aa5.19□□□□□ -1.58
LTN1-202ENST00000389194 AARSP49588 968 aaKnown RBP eCLIP5.19□□□□□ -1.58
LTN1-202ENST00000389194 KLC1Q07866 573 aa5.19□□□□□ -1.58
LTN1-202ENST00000389194 ORC2Q13416 577 aaPredicted RBP5.19□□□□□ -1.58
LTN1-202ENST00000389194 POU6F1Q14863 301 aa5.19□□□□□ -1.58
LTN1-202ENST00000389194 RNF219Q5W0B1 726 aaPredicted RBP5.19□□□□□ -1.58
LTN1-202ENST00000389194 LRIG3Q6UXM1 1119 aa5.19□□□□□ -1.58
LTN1-202ENST00000389194 APOBEC3FQ8IUX4 373 aaKnown RBP5.19□□□□□ -1.58
LTN1-202ENST00000389194 RIN3Q8TB24 985 aa5.19□□□□□ -1.58
LTN1-202ENST00000389194 SCG3Q8WXD2 468 aaKnown RBP5.19□□□□□ -1.58
LTN1-202ENST00000389194 COPS5Q92905 334 aa5.19□□□□□ -1.58
LTN1-202ENST00000389194 CEP19Q96LK0 163 aa5.19□□□□□ -1.58
LTN1-202ENST00000389194 EPAS1Q99814 870 aa5.19□□□□□ -1.58
LTN1-202ENST00000389194 IARS2Q9NSE4 1012 aaKnown RBP5.19□□□□□ -1.58
LTN1-202ENST00000389194 SETD4Q9NVD3 440 aa5.19□□□□□ -1.58
LTN1-202ENST00000389194 GTF3C4Q9UKN8 822 aa5.19□□□□□ -1.58
LTN1-202ENST00000389194 EIF3DO15371 548 aaKnown RBP eCLIP5.19□□□□□ -1.58
LTN1-202ENST00000389194 CCDC22O60826 627 aa5.19□□□□□ -1.58
LTN1-202ENST00000389194 HLA-DPA1P20036 260 aa5.19□□□□□ -1.58
LTN1-202ENST00000389194 TAF1CQ15572 869 aaPredicted RBP5.19□□□□□ -1.58
LTN1-202ENST00000389194 GRAMD4Q6IC98 578 aa5.19□□□□□ -1.58
LTN1-202ENST00000389194 SLC44A2Q8IWA5 706 aaPredicted RBP5.19□□□□□ -1.58
LTN1-202ENST00000389194 CLEC4FQ8N1N0 589 aa5.19□□□□□ -1.58
LTN1-202ENST00000389194 SYTL5Q8TDW5 730 aaPredicted RBP5.19□□□□□ -1.58
LTN1-202ENST00000389194 MMTAG2Q9BU76 263 aaKnown RBP5.19□□□□□ -1.58
LTN1-202ENST00000389194 MUC3BQ9H195 1237 aa5.19□□□□□ -1.58
LTN1-202ENST00000389194 SMARCAD1Q9H4L7 1026 aa5.19□□□□□ -1.58
LTN1-202ENST00000389194 PRDM4Q9UKN5 801 aa5.19□□□□□ -1.58
LTN1-202ENST00000389194 USP18Q9UMW8 372 aa5.19□□□□□ -1.58
LTN1-202ENST00000389194 ZC3H4Q9UPT8 1303 aaKnown RBP5.19□□□□□ -1.58
LTN1-202ENST00000389194 KIF20BQ96Q89 1820 aa5.19□□□□□ -1.58
LTN1-202ENST00000389194 RASSF10A6NK89 507 aa5.19□□□□□ -1.58
LTN1-202ENST00000389194 STK25O00506 426 aa5.19□□□□□ -1.58
LTN1-202ENST00000389194 TBX3O15119 743 aa5.19□□□□□ -1.58
LTN1-202ENST00000389194 ANGPT2O15123 496 aa5.19□□□□□ -1.58
LTN1-202ENST00000389194 PEX1O43933 1283 aa5.19□□□□□ -1.58
LTN1-202ENST00000389194 SUPT7LO94864 414 aa5.19□□□□□ -1.58
LTN1-202ENST00000389194 ICAM1P05362 532 aa5.19□□□□□ -1.58
LTN1-202ENST00000389194 NQO1P15559 274 aaKnown RBP5.19□□□□□ -1.58
LTN1-202ENST00000389194 PTGER2P43116 358 aa5.19□□□□□ -1.58
LTN1-202ENST00000389194 HIRAP54198 1017 aaPredicted RBP5.19□□□□□ -1.58
LTN1-202ENST00000389194 C15orf59Q2T9L4 293 aaPredicted RBP5.19□□□□□ -1.58
LTN1-202ENST00000389194 CCDC81Q6ZN84 652 aa5.19□□□□□ -1.58
LTN1-202ENST00000389194 TAGAPQ8N103 731 aa5.19□□□□□ -1.58
LTN1-202ENST00000389194 ZSCAN18Q8TBC5 510 aaPredicted RBP5.19□□□□□ -1.58
LTN1-202ENST00000389194 HAS1Q92839 578 aa5.19□□□□□ -1.58
LTN1-202ENST00000389194 SLC35C1Q96A29 364 aa5.19□□□□□ -1.58
LTN1-202ENST00000389194 NMD3Q96D46 503 aaKnown RBP5.19□□□□□ -1.58
LTN1-202ENST00000389194 SGSM3Q96HU1 749 aa5.19□□□□□ -1.58
LTN1-202ENST00000389194 ZBTB18Q99592 522 aa5.19□□□□□ -1.58
LTN1-202ENST00000389194 RIOX1Q9H6W3 641 aa5.19□□□□□ -1.58
LTN1-202ENST00000389194 SNTG2Q9NY99 539 aa5.19□□□□□ -1.58
LTN1-202ENST00000389194 DNAJC16Q9Y2G8 782 aa5.19□□□□□ -1.58
LTN1-202ENST00000389194 SPATA31A5Q5VU36 1347 aa5.19□□□□□ -1.58
LTN1-202ENST00000389194 SPATA31A7Q8IWB4 1347 aa5.19□□□□□ -1.58
LTN1-202ENST00000389194 DIP2BQ9P265 1576 aa5.19□□□□□ -1.58
LTN1-202ENST00000389194 C2orf71A6NGG8 1288 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms