RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 EHD2Q9NZN4 543 aa17.15■□□□□ 0.34
VCX3A-201ENST00000381089 SNX9Q9Y5X1 595 aa17.15■□□□□ 0.34
VCX3A-201ENST00000381089 WNT6Q9Y6F9 365 aa17.15■□□□□ 0.34
VCX3A-201ENST00000381089 EML5Q05BV3 1969 aa17.15■□□□□ 0.34
VCX3A-201ENST00000381089 BCLAF3A2AJT9 711 aaKnown RBP17.14■□□□□ 0.33
VCX3A-201ENST00000381089 PFKLP17858 780 aa17.14■□□□□ 0.33
VCX3A-201ENST00000381089 HDCP19113 662 aa17.14■□□□□ 0.33
VCX3A-201ENST00000381089 GRIN1Q05586 938 aa17.14■□□□□ 0.33
VCX3A-201ENST00000381089 MAPRE1Q15691 268 aaKnown RBP17.14■□□□□ 0.33
VCX3A-201ENST00000381089 TCEAL6Q6IPX3 200 aa17.14■□□□□ 0.33
VCX3A-201ENST00000381089 PSAPL1Q6NUJ1 521 aa17.14■□□□□ 0.33
VCX3A-201ENST00000381089 SV2BQ7L1I2 683 aa17.14■□□□□ 0.33
VCX3A-201ENST00000381089 ARL14EPQ8N8R7 260 aaPredicted RBP17.14■□□□□ 0.33
VCX3A-201ENST00000381089 RIN3Q8TB24 985 aa17.14■□□□□ 0.33
VCX3A-201ENST00000381089 SH3RF2Q8TEC5 729 aa17.14■□□□□ 0.33
VCX3A-201ENST00000381089 NOC3LQ8WTT2 800 aaKnown RBP17.14■□□□□ 0.33
VCX3A-201ENST00000381089 TCEAL3Q969E4 200 aa17.14■□□□□ 0.33
VCX3A-201ENST00000381089 CEP295NLQ96MC4 621 aa17.14■□□□□ 0.33
VCX3A-201ENST00000381089 CYP2S1Q96SQ9 504 aa17.14■□□□□ 0.33
VCX3A-201ENST00000381089 POLR3BQ9NW08 1133 aaPredicted RBP17.14■□□□□ 0.33
VCX3A-201ENST00000381089 KHNYNO15037 678 aaKnown RBP17.13■□□□□ 0.33
VCX3A-201ENST00000381089 TCF3P15923 654 aa17.13■□□□□ 0.33
VCX3A-201ENST00000381089 ANXA13P27216 316 aa17.13■□□□□ 0.33
VCX3A-201ENST00000381089 MAGEA11P43364 429 aa17.13■□□□□ 0.33
VCX3A-201ENST00000381089 NOVA1P51513 510 aaKnown RBP17.13■□□□□ 0.33
VCX3A-201ENST00000381089 RRAGBQ5VZM2 374 aa17.13■□□□□ 0.33
VCX3A-201ENST00000381089 DPH6Q7L8W6 267 aa17.13■□□□□ 0.33
VCX3A-201ENST00000381089 ANKRD36BP1Q96IX9 119 aa17.13■□□□□ 0.33
VCX3A-201ENST00000381089 EPSTI1Q96J88 318 aa17.13■□□□□ 0.33
VCX3A-201ENST00000381089 SLC22A12Q96S37 553 aa17.13■□□□□ 0.33
VCX3A-201ENST00000381089 PKMYT1Q99640 499 aa17.13■□□□□ 0.33
VCX3A-201ENST00000381089 STRA6Q9BX79 667 aa17.13■□□□□ 0.33
VCX3A-201ENST00000381089 IKZF4Q9H2S9 585 aa17.13■□□□□ 0.33
VCX3A-201ENST00000381089 TBC1D7Q9P0N9 293 aa17.13■□□□□ 0.33
VCX3A-201ENST00000381089 MAGEC2Q9UBF1 373 aaPredicted RBP17.13■□□□□ 0.33
VCX3A-201ENST00000381089 ARHGAP26Q9UNA1 814 aa17.13■□□□□ 0.33
VCX3A-201ENST00000381089 ZFHX4Q86UP3 3567 aa17.12■□□□□ 0.33
VCX3A-201ENST00000381089 C4orf47A7E2U8 309 aa17.12■□□□□ 0.33
VCX3A-201ENST00000381089 DCLK1O15075 740 aa17.12■□□□□ 0.33
VCX3A-201ENST00000381089 KIAA0391O15091 583 aaKnown RBP17.12■□□□□ 0.33
VCX3A-201ENST00000381089 ALDH1A2O94788 518 aa17.12■□□□□ 0.33
VCX3A-201ENST00000381089 KCNA1Q09470 495 aa17.12■□□□□ 0.33
VCX3A-201ENST00000381089 NAIF1Q69YI7 327 aaPredicted RBP17.12■□□□□ 0.33
VCX3A-201ENST00000381089 VSTM1Q6UX27 236 aa17.12■□□□□ 0.33
VCX3A-201ENST00000381089 SPATA17Q96L03 361 aa17.12■□□□□ 0.33
VCX3A-201ENST00000381089 MTMR12Q9C0I1 747 aa17.12■□□□□ 0.33
VCX3A-201ENST00000381089 OLFML3Q9NRN5 406 aa17.12■□□□□ 0.33
VCX3A-201ENST00000381089 TRPM5Q9NZQ8 1165 aa17.12■□□□□ 0.33
VCX3A-201ENST00000381089 GCNT4Q9P109 453 aa17.12■□□□□ 0.33
VCX3A-201ENST00000381089 CDH9Q9ULB4 789 aa17.12■□□□□ 0.33
VCX3A-201ENST00000381089 CFAP47Q6ZTR5 3102 aa17.12■□□□□ 0.33
VCX3A-201ENST00000381089 LAMA1P25391 3075 aa17.12■□□□□ 0.33
VCX3A-201ENST00000381089 C2orf78A6NCI8 922 aa17.11■□□□□ 0.33
VCX3A-201ENST00000381089 GABRDO14764 452 aa17.11■□□□□ 0.33
VCX3A-201ENST00000381089 TNNC2P02585 160 aa17.11■□□□□ 0.33
VCX3A-201ENST00000381089 IDEP14735 1019 aa17.11■□□□□ 0.33
VCX3A-201ENST00000381089 GRIK1P39086 918 aa17.11■□□□□ 0.33
VCX3A-201ENST00000381089 PPP3CCP48454 512 aa17.11■□□□□ 0.33
VCX3A-201ENST00000381089 SURF1Q15526 300 aa17.11■□□□□ 0.33
VCX3A-201ENST00000381089 C2orf27AQ580R0 203 aa17.11■□□□□ 0.33
VCX3A-201ENST00000381089 PMS2CLQ68D20 193 aa17.11■□□□□ 0.33
VCX3A-201ENST00000381089 FAM171BQ6P995 826 aa17.11■□□□□ 0.33
VCX3A-201ENST00000381089 STXBP4Q6ZWJ1 553 aa17.11■□□□□ 0.33
VCX3A-201ENST00000381089 CYP2U1Q7Z449 544 aa17.11■□□□□ 0.33
VCX3A-201ENST00000381089 OSTM1Q86WC4 334 aa17.11■□□□□ 0.33
VCX3A-201ENST00000381089 KIAA1958Q8N8K9 716 aa17.11■□□□□ 0.33
VCX3A-201ENST00000381089 USP33Q8TEY7 942 aa17.11■□□□□ 0.33
VCX3A-201ENST00000381089 CNOT6LQ96LI5 555 aaKnown RBP17.11■□□□□ 0.33
VCX3A-201ENST00000381089 SYT15Q9BQS2 421 aa17.11■□□□□ 0.33
VCX3A-201ENST00000381089 TMEM9BQ9NQ34 198 aa17.11■□□□□ 0.33
VCX3A-201ENST00000381089 LNP1A1A4G5 178 aa17.1■□□□□ 0.33
VCX3A-201ENST00000381089 GOLGA8IPA6NC78 632 aa17.1■□□□□ 0.33
VCX3A-201ENST00000381089 MYMKA6NI61 221 aa17.1■□□□□ 0.33
VCX3A-201ENST00000381089 GOLGA8JA6NMD2 632 aa17.1■□□□□ 0.33
VCX3A-201ENST00000381089 SLC9A3R1O14745 358 aaPredicted RBP17.1■□□□□ 0.33
VCX3A-201ENST00000381089 TRIM66O15016 1216 aa17.1■□□□□ 0.33
VCX3A-201ENST00000381089 PROS1P07225 676 aa17.1■□□□□ 0.33
VCX3A-201ENST00000381089 SEC13P55735 322 aa17.1■□□□□ 0.33
VCX3A-201ENST00000381089 WNT7BP56706 349 aa17.1■□□□□ 0.33
VCX3A-201ENST00000381089 CYP27A1Q02318 531 aa17.1■□□□□ 0.33
VCX3A-201ENST00000381089 SOWAHAQ2M3V2 549 aa17.1■□□□□ 0.33
VCX3A-201ENST00000381089 LMBRD2Q68DH5 695 aaPredicted RBP17.1■□□□□ 0.33
VCX3A-201ENST00000381089 ANO7Q6IWH7 933 aa17.1■□□□□ 0.33
VCX3A-201ENST00000381089 CCDC73Q6ZRK6 1079 aa17.1■□□□□ 0.33
VCX3A-201ENST00000381089 DENND5BQ6ZUT9 1274 aa17.1■□□□□ 0.33
VCX3A-201ENST00000381089 GPD1LQ8N335 351 aa17.1■□□□□ 0.33
VCX3A-201ENST00000381089 EZH1Q92800 747 aaPredicted RBP17.1■□□□□ 0.33
VCX3A-201ENST00000381089 MYLPFQ96A32 169 aa17.1■□□□□ 0.33
VCX3A-201ENST00000381089 HPDLQ96IR7 371 aa17.1■□□□□ 0.33
VCX3A-201ENST00000381089 SPACA7Q96KW9 195 aa17.1■□□□□ 0.33
VCX3A-201ENST00000381089 TPSD1Q9BZJ3 242 aa17.1■□□□□ 0.33
VCX3A-201ENST00000381089 LINC00597Q9H2U6 94 aa17.1■□□□□ 0.33
VCX3A-201ENST00000381089 PDE11AQ9HCR9 933 aa17.1■□□□□ 0.33
VCX3A-201ENST00000381089 MMP17Q9ULZ9 603 aa17.1■□□□□ 0.33
VCX3A-201ENST00000381089 INVSQ9Y283 1065 aa17.1■□□□□ 0.33
VCX3A-201ENST00000381089 CEP295Q9C0D2 2601 aa17.1■□□□□ 0.33
VCX3A-201ENST00000381089 VPS37CA5D8V6 355 aaPredicted RBP17.09■□□□□ 0.33
VCX3A-201ENST00000381089 MRPS21P82921 87 aaKnown RBP17.09■□□□□ 0.33
VCX3A-201ENST00000381089 ZNF252P-AS1Q0IIN9 211 aa17.09■□□□□ 0.33
VCX3A-201ENST00000381089 HSF5Q4G112 596 aaPredicted RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms