RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 ARF4P18085 180 aaPredicted RBP22.68■■□□□ 1.22
TRIM54-202ENST00000380075 EN2P19622 333 aaPredicted RBP22.68■■□□□ 1.22
TRIM54-202ENST00000380075 KLRC2P26717 231 aa22.68■■□□□ 1.22
TRIM54-202ENST00000380075 CPT1AP50416 773 aa22.68■■□□□ 1.22
TRIM54-202ENST00000380075 TMEM132DQ14C87 1099 aa22.68■■□□□ 1.22
TRIM54-202ENST00000380075 ACAP1Q15027 740 aa22.68■■□□□ 1.22
TRIM54-202ENST00000380075 KCNA10Q16322 511 aa22.68■■□□□ 1.22
TRIM54-202ENST00000380075 HADHQ16836 314 aaKnown RBP22.68■■□□□ 1.22
TRIM54-202ENST00000380075 SKIDA1Q1XH10 827 aa22.68■■□□□ 1.22
TRIM54-202ENST00000380075 CCSAPQ6IQ19 270 aaPredicted RBP22.68■■□□□ 1.22
TRIM54-202ENST00000380075 TMEM176AQ96HP8 235 aa22.68■■□□□ 1.22
TRIM54-202ENST00000380075 ADPGKQ9BRR6 497 aa22.68■■□□□ 1.22
TRIM54-202ENST00000380075 RABEP2Q9H5N1 569 aa22.68■■□□□ 1.22
TRIM54-202ENST00000380075 hCG_1818297A0A087WSY0 165 aa22.67■■□□□ 1.22
TRIM54-202ENST00000380075 H3BRB1 525 aa22.67■■□□□ 1.22
TRIM54-202ENST00000380075 SLC10A6Q3KNW5 377 aa22.67■■□□□ 1.22
TRIM54-202ENST00000380075 GSTA5Q7RTV2 222 aa22.67■■□□□ 1.22
TRIM54-202ENST00000380075 APBB1IPQ7Z5R6 666 aaPredicted RBP22.67■■□□□ 1.22
TRIM54-202ENST00000380075 SLC4A11Q8NBS3 891 aa22.67■■□□□ 1.22
TRIM54-202ENST00000380075 IPO4Q8TEX9 1081 aaKnown RBP22.67■■□□□ 1.22
TRIM54-202ENST00000380075 SDCBP2Q9H190 292 aa22.67■■□□□ 1.22
TRIM54-202ENST00000380075 TUT1Q9H6E5 874 aaKnown RBP22.67■■□□□ 1.22
TRIM54-202ENST00000380075 PPANQ9NQ55 473 aaKnown RBP22.67■■□□□ 1.22
TRIM54-202ENST00000380075 KIAA1257Q9ULG3 409 aa22.67■■□□□ 1.22
TRIM54-202ENST00000380075 TCEA3O75764 348 aa22.67■■□□□ 1.22
TRIM54-202ENST00000380075 VDRP11473 427 aa22.67■■□□□ 1.22
TRIM54-202ENST00000380075 ATF7P17544 494 aaPredicted RBP22.67■■□□□ 1.22
TRIM54-202ENST00000380075 PSMA2P25787 234 aa22.67■■□□□ 1.22
TRIM54-202ENST00000380075 CST5P28325 142 aaPredicted RBP22.67■■□□□ 1.22
TRIM54-202ENST00000380075 RAP1GAPP47736 663 aa22.67■■□□□ 1.22
TRIM54-202ENST00000380075 TRIP13Q15645 432 aaPredicted RBP22.67■■□□□ 1.22
TRIM54-202ENST00000380075 CYP4A22Q5TCH4 519 aa22.67■■□□□ 1.22
TRIM54-202ENST00000380075 IZUMO3Q5VZ72 239 aa22.67■■□□□ 1.22
TRIM54-202ENST00000380075 ANKS1BQ7Z6G8 1248 aa22.67■■□□□ 1.22
TRIM54-202ENST00000380075 FAM169AQ9Y6X4 670 aa22.67■■□□□ 1.22
TRIM54-202ENST00000380075 PI4K2BG5E9Z4 385 aa22.66■■□□□ 1.22
TRIM54-202ENST00000380075 VTNP04004 478 aa22.66■■□□□ 1.22
TRIM54-202ENST00000380075 ZNF286BP0CG31 522 aa22.66■■□□□ 1.22
TRIM54-202ENST00000380075 CHKAP35790 457 aa22.66■■□□□ 1.22
TRIM54-202ENST00000380075 CDKN2BP42772 138 aa22.66■■□□□ 1.22
TRIM54-202ENST00000380075 GABRB2P47870 512 aa22.66■■□□□ 1.22
TRIM54-202ENST00000380075 MNX1P50219 401 aaPredicted RBP22.66■■□□□ 1.22
TRIM54-202ENST00000380075 SEC24CP53992 1094 aa22.66■■□□□ 1.22
TRIM54-202ENST00000380075 PSMC1P62191 440 aaKnown RBP22.66■■□□□ 1.22
TRIM54-202ENST00000380075 RBP5P82980 135 aa22.66■■□□□ 1.22
TRIM54-202ENST00000380075 AUHQ13825 339 aaKnown RBP22.66■■□□□ 1.22
TRIM54-202ENST00000380075 CNGA2Q16280 664 aa22.66■■□□□ 1.22
TRIM54-202ENST00000380075 ATP13A4Q4VNC1 1196 aa22.66■■□□□ 1.22
TRIM54-202ENST00000380075 NLRP7Q8WX94 980 aa22.66■■□□□ 1.22
TRIM54-202ENST00000380075 NKD2Q969F2 451 aaPredicted RBP22.66■■□□□ 1.22
TRIM54-202ENST00000380075 ACAP3Q96P50 834 aa22.66■■□□□ 1.22
TRIM54-202ENST00000380075 MIS12Q9H081 205 aa22.66■■□□□ 1.22
TRIM54-202ENST00000380075 SMYD3Q9H7B4 428 aa22.66■■□□□ 1.22
TRIM54-202ENST00000380075 WDR3Q9UNX4 943 aaKnown RBP eCLIP22.66■■□□□ 1.22
TRIM54-202ENST00000380075 A0A1B0GUA9 196 aa22.65■■□□□ 1.22
TRIM54-202ENST00000380075 MEFVO15553 781 aaPredicted RBP22.65■■□□□ 1.22
TRIM54-202ENST00000380075 TSPAN1O60635 241 aa22.65■■□□□ 1.22
TRIM54-202ENST00000380075 ASGR1P07306 291 aa22.65■■□□□ 1.22
TRIM54-202ENST00000380075 TCF4P15884 667 aa22.65■■□□□ 1.22
TRIM54-202ENST00000380075 CDH8P55286 799 aa22.65■■□□□ 1.22
TRIM54-202ENST00000380075 INCA1Q0VD86 236 aa22.65■■□□□ 1.22
TRIM54-202ENST00000380075 DGKDQ16760 1214 aa22.65■■□□□ 1.22
TRIM54-202ENST00000380075 DCAF4L1Q3SXM0 396 aa22.65■■□□□ 1.22
TRIM54-202ENST00000380075 ERMARDQ5T6L9 678 aa22.65■■□□□ 1.22
TRIM54-202ENST00000380075 HIBCHQ6NVY1 386 aaPredicted RBP22.65■■□□□ 1.22
TRIM54-202ENST00000380075 ALLCQ8N6M5 410 aa22.65■■□□□ 1.22
TRIM54-202ENST00000380075 EPS8L3Q8TE67 593 aaKnown RBP22.65■■□□□ 1.22
TRIM54-202ENST00000380075 RAPGEF5Q92565 580 aa22.65■■□□□ 1.22
TRIM54-202ENST00000380075 HPDLQ96IR7 371 aa22.65■■□□□ 1.22
TRIM54-202ENST00000380075 CPB2Q96IY4 423 aa22.65■■□□□ 1.22
TRIM54-202ENST00000380075 SYNCQ9H7C4 482 aa22.65■■□□□ 1.22
TRIM54-202ENST00000380075 LRRD1A4D1F6 860 aa22.65■■□□□ 1.22
TRIM54-202ENST00000380075 DNM1LO00429 736 aa22.65■■□□□ 1.22
TRIM54-202ENST00000380075 KRT10P13645 584 aa22.65■■□□□ 1.22
TRIM54-202ENST00000380075 RFC1P35251 1148 aaPredicted RBP22.65■■□□□ 1.22
TRIM54-202ENST00000380075 CDC42EP1Q00587 391 aa22.65■■□□□ 1.22
TRIM54-202ENST00000380075 GRIK4Q16099 956 aa22.65■■□□□ 1.22
TRIM54-202ENST00000380075 KAZNQ674X7 775 aa22.65■■□□□ 1.22
TRIM54-202ENST00000380075 YTHDF3Q7Z739 585 aaKnown RBP22.65■■□□□ 1.22
TRIM54-202ENST00000380075 XYLT1Q86Y38 959 aa22.65■■□□□ 1.22
TRIM54-202ENST00000380075 ZCCHC9Q8N567 271 aaKnown RBP22.65■■□□□ 1.22
TRIM54-202ENST00000380075 TTC13Q8NBP0 860 aa22.65■■□□□ 1.22
TRIM54-202ENST00000380075 XPO6Q96QU8 1125 aaKnown RBP22.65■■□□□ 1.22
TRIM54-202ENST00000380075 ELOVL4Q9GZR5 314 aa22.65■■□□□ 1.22
TRIM54-202ENST00000380075 KLHL11Q9NVR0 708 aa22.65■■□□□ 1.22
TRIM54-202ENST00000380075 BARX2Q9UMQ3 279 aaPredicted RBP22.65■■□□□ 1.22
TRIM54-202ENST00000380075 ZNF148Q9UQR1 794 aa22.65■■□□□ 1.22
TRIM54-202ENST00000380075 EVPLQ92817 2033 aa22.64■■□□□ 1.21
TRIM54-202ENST00000380075 C5orf60A6NFR6 353 aa22.64■■□□□ 1.21
TRIM54-202ENST00000380075 ITGAVP06756 1048 aa22.64■■□□□ 1.21
TRIM54-202ENST00000380075 MYL3P08590 195 aa22.64■■□□□ 1.21
TRIM54-202ENST00000380075 GRM5P41594 1212 aa22.64■■□□□ 1.21
TRIM54-202ENST00000380075 VCPP55072 806 aaKnown RBP22.64■■□□□ 1.21
TRIM54-202ENST00000380075 SLC25A11Q02978 314 aaKnown RBP22.64■■□□□ 1.21
TRIM54-202ENST00000380075 CXCL17Q6UXB2 119 aa22.64■■□□□ 1.21
TRIM54-202ENST00000380075 PCSK9Q8NBP7 692 aaKnown RBP22.64■■□□□ 1.21
TRIM54-202ENST00000380075 DIS3LQ8TF46 1054 aaKnown RBP22.64■■□□□ 1.21
TRIM54-202ENST00000380075 CYTH4Q9UIA0 394 aa22.64■■□□□ 1.21
TRIM54-202ENST00000380075 DNPEPQ9ULA0 475 aa22.64■■□□□ 1.21
TRIM54-202ENST00000380075 DERAQ9Y315 318 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms