RNA–Protein interactions for RNA: ENST00000379960.9

ITSN1-201, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 3,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-201ENST00000379960 FDFT1P37268 417 aa11.3□□□□□ -0.6
ITSN1-201ENST00000379960 CCDC137Q6PK04 289 aaKnown RBP11.3□□□□□ -0.6
ITSN1-201ENST00000379960 PPM1KQ8N3J5 372 aa11.3□□□□□ -0.6
ITSN1-201ENST00000379960 LSM14AQ8ND56 463 aaKnown RBP11.3□□□□□ -0.6
ITSN1-201ENST00000379960 SUN5Q8TC36 379 aa11.3□□□□□ -0.6
ITSN1-201ENST00000379960 HELQQ8TDG4 1101 aa11.3□□□□□ -0.6
ITSN1-201ENST00000379960 LRRC15Q8TF66 581 aa11.3□□□□□ -0.6
ITSN1-201ENST00000379960 BORCS5Q969J3 196 aa11.3□□□□□ -0.6
ITSN1-201ENST00000379960 CSRNP1Q96S65 589 aa11.3□□□□□ -0.6
ITSN1-201ENST00000379960 RBM15Q96T37 977 aaKnown RBP eCLIP11.3□□□□□ -0.6
ITSN1-201ENST00000379960 ADAM33Q9BZ11 813 aa11.3□□□□□ -0.6
ITSN1-201ENST00000379960 GPAMQ9HCL2 828 aa11.3□□□□□ -0.6
ITSN1-201ENST00000379960 RIC8AQ9NPQ8 531 aa11.3□□□□□ -0.6
ITSN1-201ENST00000379960 ARHGEF4Q9NR80 690 aa11.3□□□□□ -0.6
ITSN1-201ENST00000379960 KLHL3Q9UH77 587 aa11.3□□□□□ -0.6
ITSN1-201ENST00000379960 PCDHA4Q9UN74 947 aa11.3□□□□□ -0.6
ITSN1-201ENST00000379960 EMSYQ7Z589 1322 aa11.3□□□□□ -0.6
ITSN1-201ENST00000379960 COL4A5P29400 1685 aa11.3□□□□□ -0.6
ITSN1-201ENST00000379960 SOBPA7XYQ1 873 aa11.3□□□□□ -0.6
ITSN1-201ENST00000379960 PODXLO00592 558 aa11.3□□□□□ -0.6
ITSN1-201ENST00000379960 CDH16O75309 829 aa11.3□□□□□ -0.6
ITSN1-201ENST00000379960 FKBP6O75344 327 aa11.3□□□□□ -0.6
ITSN1-201ENST00000379960 DDHD2O94830 711 aa11.3□□□□□ -0.6
ITSN1-201ENST00000379960 LMNB1P20700 586 aa11.3□□□□□ -0.6
ITSN1-201ENST00000379960 CA4P22748 312 aa11.3□□□□□ -0.6
ITSN1-201ENST00000379960 KCNJ1P48048 391 aa11.3□□□□□ -0.6
ITSN1-201ENST00000379960 NUP107P57740 925 aa11.3□□□□□ -0.6
ITSN1-201ENST00000379960 YWHAGP61981 247 aaKnown RBP eCLIP11.3□□□□□ -0.6
ITSN1-201ENST00000379960 ADAM17P78536 824 aa11.3□□□□□ -0.6
ITSN1-201ENST00000379960 SLC1A5Q15758 541 aa11.3□□□□□ -0.6
ITSN1-201ENST00000379960 TIGD2Q4W5G0 525 aa11.3□□□□□ -0.6
ITSN1-201ENST00000379960 KAZNQ674X7 775 aa11.3□□□□□ -0.6
ITSN1-201ENST00000379960 SIGIRRQ6IA17 410 aa11.3□□□□□ -0.6
ITSN1-201ENST00000379960 CCDC105Q8IYK2 499 aa11.3□□□□□ -0.6
ITSN1-201ENST00000379960 MARVELD2Q8N4S9 558 aa11.3□□□□□ -0.6
ITSN1-201ENST00000379960 KIAA0895Q8NCT3 520 aa11.3□□□□□ -0.6
ITSN1-201ENST00000379960 TRPC4APQ8TEL6 797 aa11.3□□□□□ -0.6
ITSN1-201ENST00000379960 ZNF75CPQ92670 426 aaPredicted RBP11.3□□□□□ -0.6
ITSN1-201ENST00000379960 HPS1Q92902 700 aa11.3□□□□□ -0.6
ITSN1-201ENST00000379960 POP1Q99575 1024 aaKnown RBP11.3□□□□□ -0.6
ITSN1-201ENST00000379960 CTRCQ99895 268 aa11.3□□□□□ -0.6
ITSN1-201ENST00000379960 PHF20Q9BVI0 1012 aa11.3□□□□□ -0.6
ITSN1-201ENST00000379960 GLT8D2Q9H1C3 349 aa11.3□□□□□ -0.6
ITSN1-201ENST00000379960 HACD3Q9P035 362 aa11.3□□□□□ -0.6
ITSN1-201ENST00000379960 ARIH1Q9Y4X5 557 aaPredicted RBP11.3□□□□□ -0.6
ITSN1-201ENST00000379960 PCDHA3Q9Y5H8 950 aa11.3□□□□□ -0.6
ITSN1-201ENST00000379960 ZMYM2Q9UBW7 1377 aa11.3□□□□□ -0.6
ITSN1-201ENST00000379960 DDX3YO15523 660 aaKnown RBP11.3□□□□□ -0.6
ITSN1-201ENST00000379960 TM7SF2O76062 418 aa11.3□□□□□ -0.6
ITSN1-201ENST00000379960 BAIAP3O94812 1187 aa11.3□□□□□ -0.6
ITSN1-201ENST00000379960 TTC4O95801 387 aa11.3□□□□□ -0.6
ITSN1-201ENST00000379960 PTPN2P17706 415 aa11.3□□□□□ -0.6
ITSN1-201ENST00000379960 NR4A1P22736 598 aa11.3□□□□□ -0.6
ITSN1-201ENST00000379960 CDK9P50750 372 aaKnown RBP11.3□□□□□ -0.6
ITSN1-201ENST00000379960 TUBA4AP68366 448 aa11.3□□□□□ -0.6
ITSN1-201ENST00000379960 KDSRQ06136 332 aa11.3□□□□□ -0.6
ITSN1-201ENST00000379960 MAPK6Q16659 721 aa11.3□□□□□ -0.6
ITSN1-201ENST00000379960 ZNF568Q3ZCX4 644 aa11.3□□□□□ -0.6
ITSN1-201ENST00000379960 SLC38A6Q8IZM9 456 aa11.3□□□□□ -0.6
ITSN1-201ENST00000379960 PRELID2Q8N945 189 aa11.3□□□□□ -0.6
ITSN1-201ENST00000379960 DDI1Q8WTU0 396 aa11.3□□□□□ -0.6
ITSN1-201ENST00000379960 UPF1Q92900 1129 aaKnown RBP eCLIP11.3□□□□□ -0.6
ITSN1-201ENST00000379960 PWWP2AQ96N64 755 aa11.3□□□□□ -0.6
ITSN1-201ENST00000379960 NCKIPSDQ9NZQ3 722 aa11.3□□□□□ -0.6
ITSN1-201ENST00000379960 KIAA1257Q9ULG3 409 aa11.3□□□□□ -0.6
ITSN1-201ENST00000379960 V9GY48 417 aaPredicted RBP11.3□□□□□ -0.6
ITSN1-201ENST00000379960 DDX60LQ5H9U9 1706 aaKnown RBP11.29□□□□□ -0.6
ITSN1-201ENST00000379960 CYTH3O43739 400 aa11.29□□□□□ -0.6
ITSN1-201ENST00000379960 CD48P09326 243 aa11.29□□□□□ -0.6
ITSN1-201ENST00000379960 SRGAP2CP0DJJ0 459 aa11.29□□□□□ -0.6
ITSN1-201ENST00000379960 SRGAP2BP0DMP2 458 aa11.29□□□□□ -0.6
ITSN1-201ENST00000379960 VEGFAP15692 232 aaPredicted RBP11.29□□□□□ -0.6
ITSN1-201ENST00000379960 POLR2EP19388 210 aaKnown RBP11.29□□□□□ -0.6
ITSN1-201ENST00000379960 ZNF200P98182 395 aaPredicted RBP11.29□□□□□ -0.6
ITSN1-201ENST00000379960 TROAPQ12815 778 aa11.29□□□□□ -0.6
ITSN1-201ENST00000379960 PCSK7Q16549 785 aa11.29□□□□□ -0.6
ITSN1-201ENST00000379960 TMPRSS6Q8IU80 811 aa11.29□□□□□ -0.6
ITSN1-201ENST00000379960 ALLCQ8N6M5 410 aa11.29□□□□□ -0.6
ITSN1-201ENST00000379960 NLGN2Q8NFZ4 835 aa11.29□□□□□ -0.6
ITSN1-201ENST00000379960 DENND1AQ8TEH3 1009 aa11.29□□□□□ -0.6
ITSN1-201ENST00000379960 PRMT6Q96LA8 375 aaPredicted RBP11.29□□□□□ -0.6
ITSN1-201ENST00000379960 KLHL25Q9H0H3 589 aa11.29□□□□□ -0.6
ITSN1-201ENST00000379960 KBTBD4Q9NVX7 518 aa11.29□□□□□ -0.6
ITSN1-201ENST00000379960 PLK2Q9NYY3 685 aa11.29□□□□□ -0.6
ITSN1-201ENST00000379960 XPO1O14980 1071 aaKnown RBP11.29□□□□□ -0.6
ITSN1-201ENST00000379960 FGRP09769 529 aa11.29□□□□□ -0.6
ITSN1-201ENST00000379960 CHRNA3P32297 505 aa11.29□□□□□ -0.6
ITSN1-201ENST00000379960 LONP1P36776 959 aaKnown RBP11.29□□□□□ -0.6
ITSN1-201ENST00000379960 AP3M2P53677 418 aa11.29□□□□□ -0.6
ITSN1-201ENST00000379960 SNAPC2Q13487 334 aa11.29□□□□□ -0.6
ITSN1-201ENST00000379960 APOFQ13790 326 aa11.29□□□□□ -0.6
ITSN1-201ENST00000379960 EDRF1Q3B7T1 1238 aa11.29□□□□□ -0.6
ITSN1-201ENST00000379960 DALRD3Q5D0E6 543 aaKnown RBP11.29□□□□□ -0.6
ITSN1-201ENST00000379960 DCLRE1AQ6PJP8 1040 aa11.29□□□□□ -0.6
ITSN1-201ENST00000379960 CCDC81Q6ZN84 652 aa11.29□□□□□ -0.6
ITSN1-201ENST00000379960 ZBTB46Q86UZ6 589 aa11.29□□□□□ -0.6
ITSN1-201ENST00000379960 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.29□□□□□ -0.6
ITSN1-201ENST00000379960 Q8N9G6 341 aaPredicted RBP11.29□□□□□ -0.6
ITSN1-201ENST00000379960 PNMA1Q8ND90 353 aa11.29□□□□□ -0.6
ITSN1-201ENST00000379960 PPP1R14CQ8TAE6 165 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms