RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 SLC26A2P50443 739 aa11.37□□□□□ -0.59
NEDD9-201ENST00000379433 ITIH3Q06033 890 aa11.37□□□□□ -0.59
NEDD9-201ENST00000379433 FAM110CQ1W6H9 321 aa11.37□□□□□ -0.59
NEDD9-201ENST00000379433 PTPN20Q4JDL3 420 aa11.37□□□□□ -0.59
NEDD9-201ENST00000379433 FAM102AQ5T9C2 384 aaPredicted RBP11.37□□□□□ -0.59
NEDD9-201ENST00000379433 C11orf63Q6NUN7 778 aa11.37□□□□□ -0.59
NEDD9-201ENST00000379433 SAMD14Q8IZD0 417 aaPredicted RBP11.37□□□□□ -0.59
NEDD9-201ENST00000379433 NDUFAF2Q8N183 169 aa11.37□□□□□ -0.59
NEDD9-201ENST00000379433 TMCO5AQ8N6Q1 288 aa11.37□□□□□ -0.59
NEDD9-201ENST00000379433 PIWIL1Q96J94 861 aaKnown RBP11.37□□□□□ -0.59
NEDD9-201ENST00000379433 ZFP42Q96MM3 310 aa11.37□□□□□ -0.59
NEDD9-201ENST00000379433 ZMAT2Q96NC0 199 aaKnown RBP11.37□□□□□ -0.59
NEDD9-201ENST00000379433 AP5M1Q9H0R1 490 aa11.37□□□□□ -0.59
NEDD9-201ENST00000379433 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.37□□□□□ -0.59
NEDD9-201ENST00000379433 TNFSF13BQ9Y275 285 aa11.37□□□□□ -0.59
NEDD9-201ENST00000379433 PCDHA3Q9Y5H8 950 aa11.37□□□□□ -0.59
NEDD9-201ENST00000379433 TIMM13Q9Y5L4 95 aaPredicted RBP11.37□□□□□ -0.59
NEDD9-201ENST00000379433 TRIP12Q14669 1992 aaPredicted RBP11.37□□□□□ -0.59
NEDD9-201ENST00000379433 WDR90Q96KV7 1748 aa11.37□□□□□ -0.59
NEDD9-201ENST00000379433 LOXHD1Q8IVV2 1947 aa11.37□□□□□ -0.59
NEDD9-201ENST00000379433 MEIS3P2A8K0S8 358 aa11.37□□□□□ -0.59
NEDD9-201ENST00000379433 SHBGP04278 402 aa11.37□□□□□ -0.59
NEDD9-201ENST00000379433 ENPP1P22413 925 aa11.37□□□□□ -0.59
NEDD9-201ENST00000379433 RANBP1P43487 201 aa11.37□□□□□ -0.59
NEDD9-201ENST00000379433 CLK1P49759 484 aaKnown RBP11.37□□□□□ -0.59
NEDD9-201ENST00000379433 CENPCQ03188 943 aa11.37□□□□□ -0.59
NEDD9-201ENST00000379433 TRIM32Q13049 653 aa11.37□□□□□ -0.59
NEDD9-201ENST00000379433 OLFML1Q6UWY5 402 aa11.37□□□□□ -0.59
NEDD9-201ENST00000379433 RBM12BQ8IXT5 1001 aaKnown RBP11.37□□□□□ -0.59
NEDD9-201ENST00000379433 RASGEF1CQ8N431 466 aa11.37□□□□□ -0.59
NEDD9-201ENST00000379433 FEZF2Q8TBJ5 459 aa11.37□□□□□ -0.59
NEDD9-201ENST00000379433 ERP27Q96DN0 273 aa11.37□□□□□ -0.59
NEDD9-201ENST00000379433 POM121Q96HA1 1249 aa11.37□□□□□ -0.59
NEDD9-201ENST00000379433 SCYL1Q96KG9 808 aa11.37□□□□□ -0.59
NEDD9-201ENST00000379433 SEMA4AQ9H3S1 761 aa11.37□□□□□ -0.59
NEDD9-201ENST00000379433 TBK1Q9UHD2 729 aa11.37□□□□□ -0.59
NEDD9-201ENST00000379433 RASAL2Q9UJF2 1139 aa11.37□□□□□ -0.59
NEDD9-201ENST00000379433 MAGEB2O15479 319 aa11.37□□□□□ -0.59
NEDD9-201ENST00000379433 ZNF189O75820 626 aaPredicted RBP11.37□□□□□ -0.59
NEDD9-201ENST00000379433 SNUPNO95149 360 aaKnown RBP11.37□□□□□ -0.59
NEDD9-201ENST00000379433 ZBTB48P10074 688 aaPredicted RBP11.37□□□□□ -0.59
NEDD9-201ENST00000379433 KRT3P12035 628 aa11.37□□□□□ -0.59
NEDD9-201ENST00000379433 GNGT1P63211 74 aa11.37□□□□□ -0.59
NEDD9-201ENST00000379433 CALCOCO2Q13137 446 aa11.37□□□□□ -0.59
NEDD9-201ENST00000379433 ZNF618Q5T7W0 954 aa11.37□□□□□ -0.59
NEDD9-201ENST00000379433 CYP4F22Q6NT55 531 aa11.37□□□□□ -0.59
NEDD9-201ENST00000379433 ZNF572Q7Z3I7 529 aaPredicted RBP11.37□□□□□ -0.59
NEDD9-201ENST00000379433 RELL1Q8IUW5 271 aa11.37□□□□□ -0.59
NEDD9-201ENST00000379433 DCLK2Q8N568 766 aa11.37□□□□□ -0.59
NEDD9-201ENST00000379433 WDTC1Q8N5D0 677 aa11.37□□□□□ -0.59
NEDD9-201ENST00000379433 SHCBP1Q8NEM2 672 aa11.37□□□□□ -0.59
NEDD9-201ENST00000379433 MIEF2Q96C03 454 aa11.37□□□□□ -0.59
NEDD9-201ENST00000379433 B3GNT5Q9BYG0 378 aa11.37□□□□□ -0.59
NEDD9-201ENST00000379433 ELOVL4Q9GZR5 314 aa11.37□□□□□ -0.59
NEDD9-201ENST00000379433 RAB17Q9H0T7 212 aa11.37□□□□□ -0.59
NEDD9-201ENST00000379433 MRPL47Q9HD33 250 aaKnown RBP11.37□□□□□ -0.59
NEDD9-201ENST00000379433 PARVAQ9NVD7 372 aa11.37□□□□□ -0.59
NEDD9-201ENST00000379433 NOVA2Q9UNW9 492 aaKnown RBP11.37□□□□□ -0.59
NEDD9-201ENST00000379433 DICER1Q9UPY3 1922 aaKnown RBP11.36□□□□□ -0.59
NEDD9-201ENST00000379433 PHF2O75151 1096 aa11.36□□□□□ -0.59
NEDD9-201ENST00000379433 B3GALNT1O75752 331 aa11.36□□□□□ -0.59
NEDD9-201ENST00000379433 ACAT1P24752 427 aaKnown RBP11.36□□□□□ -0.59
NEDD9-201ENST00000379433 ECHS1P30084 290 aa11.36□□□□□ -0.59
NEDD9-201ENST00000379433 COILP38432 576 aaPredicted RBP11.36□□□□□ -0.59
NEDD9-201ENST00000379433 GRB14Q14449 540 aa11.36□□□□□ -0.59
NEDD9-201ENST00000379433 C15orf59Q2T9L4 293 aaPredicted RBP11.36□□□□□ -0.59
NEDD9-201ENST00000379433 MFSD7Q6UXD7 560 aa11.36□□□□□ -0.59
NEDD9-201ENST00000379433 SCUBE3Q8IX30 993 aa11.36□□□□□ -0.59
NEDD9-201ENST00000379433 RAPGEF5Q92565 580 aa11.36□□□□□ -0.59
NEDD9-201ENST00000379433 NDRG1Q92597 394 aaKnown RBP11.36□□□□□ -0.59
NEDD9-201ENST00000379433 SPACA7Q96KW9 195 aa11.36□□□□□ -0.59
NEDD9-201ENST00000379433 PLVAPQ9BX97 442 aa11.36□□□□□ -0.59
NEDD9-201ENST00000379433 CAPS2Q9BXY5 557 aa11.36□□□□□ -0.59
NEDD9-201ENST00000379433 DNAI2Q9GZS0 605 aa11.36□□□□□ -0.59
NEDD9-201ENST00000379433 PTPRHQ9HD43 1115 aa11.36□□□□□ -0.59
NEDD9-201ENST00000379433 MLXIPLQ9NP71 852 aa11.36□□□□□ -0.59
NEDD9-201ENST00000379433 NGRNQ9NPE2 291 aaKnown RBP11.36□□□□□ -0.59
NEDD9-201ENST00000379433 PPANQ9NQ55 473 aaKnown RBP11.36□□□□□ -0.59
NEDD9-201ENST00000379433 GPATCH2LQ9NWQ4 482 aa11.36□□□□□ -0.59
NEDD9-201ENST00000379433 C6orf203Q9P0P8 240 aaPredicted RBP11.36□□□□□ -0.59
NEDD9-201ENST00000379433 KIAA0391O15091 583 aaKnown RBP11.36□□□□□ -0.59
NEDD9-201ENST00000379433 OPA1O60313 960 aa11.36□□□□□ -0.59
NEDD9-201ENST00000379433 RECQL4O94761 1208 aa11.36□□□□□ -0.59
NEDD9-201ENST00000379433 CYP1A1P04798 512 aaPredicted RBP11.36□□□□□ -0.59
NEDD9-201ENST00000379433 PYGBP11216 843 aa11.36□□□□□ -0.59
NEDD9-201ENST00000379433 CLDN10P78369 228 aa11.36□□□□□ -0.59
NEDD9-201ENST00000379433 CRHR2Q13324 411 aa11.36□□□□□ -0.59
NEDD9-201ENST00000379433 MFSD10Q14728 455 aa11.36□□□□□ -0.59
NEDD9-201ENST00000379433 SMAD1Q15797 465 aaKnown RBP11.36□□□□□ -0.59
NEDD9-201ENST00000379433 UAP1Q16222 522 aaPredicted RBP11.36□□□□□ -0.59
NEDD9-201ENST00000379433 ZNF365Q70YC5 407 aa11.36□□□□□ -0.59
NEDD9-201ENST00000379433 HASPINQ8TF76 798 aa11.36□□□□□ -0.59
NEDD9-201ENST00000379433 LPPQ93052 612 aa11.36□□□□□ -0.59
NEDD9-201ENST00000379433 GCOM2Q9BZD3 368 aaPredicted RBP11.36□□□□□ -0.59
NEDD9-201ENST00000379433 OSBPL8Q9BZF1 889 aa11.36□□□□□ -0.59
NEDD9-201ENST00000379433 GAS2O43903 313 aaKnown RBP11.35□□□□□ -0.59
NEDD9-201ENST00000379433 PROSCO94903 275 aa11.35□□□□□ -0.59
NEDD9-201ENST00000379433 CD48P09326 243 aa11.35□□□□□ -0.59
NEDD9-201ENST00000379433 MYZAPP0CAP1 466 aa11.35□□□□□ -0.59
NEDD9-201ENST00000379433 SLC29A2Q14542 456 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms