RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 PIGKQ92643 395 aa19.09■□□□□ 0.65
PDLIM4-202ENST00000379018 KIF2CQ99661 725 aa19.09■□□□□ 0.65
PDLIM4-202ENST00000379018 TMEM206Q9H813 350 aa19.09■□□□□ 0.65
PDLIM4-202ENST00000379018 TMEM9BQ9NQ34 198 aa19.09■□□□□ 0.65
PDLIM4-202ENST00000379018 SNX9Q9Y5X1 595 aa19.09■□□□□ 0.65
PDLIM4-202ENST00000379018 GOLGA8IPA6NC78 632 aa19.08■□□□□ 0.64
PDLIM4-202ENST00000379018 GOLGA8JA6NMD2 632 aa19.08■□□□□ 0.64
PDLIM4-202ENST00000379018 ADSSP30520 456 aa19.08■□□□□ 0.64
PDLIM4-202ENST00000379018 ABCD1P33897 745 aa19.08■□□□□ 0.64
PDLIM4-202ENST00000379018 ADGRF2Q8IZF7 708 aa19.08■□□□□ 0.64
PDLIM4-202ENST00000379018 CSGALNACT2Q8N6G5 542 aa19.08■□□□□ 0.64
PDLIM4-202ENST00000379018 C1orf127Q8N9H9 656 aa19.08■□□□□ 0.64
PDLIM4-202ENST00000379018 FSIP1Q8NA03 581 aa19.08■□□□□ 0.64
PDLIM4-202ENST00000379018 LEO1Q8WVC0 666 aaPredicted RBP19.08■□□□□ 0.64
PDLIM4-202ENST00000379018 ACBD6Q9BR61 282 aa19.08■□□□□ 0.64
PDLIM4-202ENST00000379018 STYXL1Q9Y6J8 313 aa19.08■□□□□ 0.64
PDLIM4-202ENST00000379018 HELZP42694 1942 aaKnown RBP19.08■□□□□ 0.64
PDLIM4-202ENST00000379018 IGF2RP11717 2491 aa19.07■□□□□ 0.64
PDLIM4-202ENST00000379018 SOBPA7XYQ1 873 aa19.07■□□□□ 0.64
PDLIM4-202ENST00000379018 SLC26A4O43511 780 aa19.07■□□□□ 0.64
PDLIM4-202ENST00000379018 NFATC1O95644 943 aa19.07■□□□□ 0.64
PDLIM4-202ENST00000379018 HDCP19113 662 aa19.07■□□□□ 0.64
PDLIM4-202ENST00000379018 DDIT3P35638 169 aa19.07■□□□□ 0.64
PDLIM4-202ENST00000379018 PSMC1P62191 440 aaKnown RBP19.07■□□□□ 0.64
PDLIM4-202ENST00000379018 KCNA1Q09470 495 aa19.07■□□□□ 0.64
PDLIM4-202ENST00000379018 POSTNQ15063 836 aa19.07■□□□□ 0.64
PDLIM4-202ENST00000379018 DEFB124Q8NES8 71 aa19.07■□□□□ 0.64
PDLIM4-202ENST00000379018 USP33Q8TEY7 942 aa19.07■□□□□ 0.64
PDLIM4-202ENST00000379018 RLN3Q8WXF3 142 aa19.07■□□□□ 0.64
PDLIM4-202ENST00000379018 TRMT2BQ96GJ1 504 aaKnown RBP19.07■□□□□ 0.64
PDLIM4-202ENST00000379018 MRPL44Q9H9J2 332 aaKnown RBP19.07■□□□□ 0.64
PDLIM4-202ENST00000379018 ABCB6Q9NP58 842 aa19.07■□□□□ 0.64
PDLIM4-202ENST00000379018 PPP4R2Q9NY27 417 aa19.07■□□□□ 0.64
PDLIM4-202ENST00000379018 OPRD1P41143 372 aa19.06■□□□□ 0.64
PDLIM4-202ENST00000379018 IRX4P78413 519 aa19.06■□□□□ 0.64
PDLIM4-202ENST00000379018 LMBRD2Q68DH5 695 aaPredicted RBP19.06■□□□□ 0.64
PDLIM4-202ENST00000379018 ZNF720Q7Z2F6 126 aa19.06■□□□□ 0.64
PDLIM4-202ENST00000379018 NT5DC4Q86YG4 428 aa19.06■□□□□ 0.64
PDLIM4-202ENST00000379018 BRSK2Q8IWQ3 736 aa19.06■□□□□ 0.64
PDLIM4-202ENST00000379018 TMEM86AQ8N2M4 240 aa19.06■□□□□ 0.64
PDLIM4-202ENST00000379018 MDGA1Q8NFP4 955 aa19.06■□□□□ 0.64
PDLIM4-202ENST00000379018 CACTINQ8WUQ7 758 aaKnown RBP19.06■□□□□ 0.64
PDLIM4-202ENST00000379018 MYRFLQ96LU7 910 aa19.06■□□□□ 0.64
PDLIM4-202ENST00000379018 ADAM33Q9BZ11 813 aa19.06■□□□□ 0.64
PDLIM4-202ENST00000379018 MTMR12Q9C0I1 747 aa19.06■□□□□ 0.64
PDLIM4-202ENST00000379018 RBAKQ9NYW8 714 aaPredicted RBP19.06■□□□□ 0.64
PDLIM4-202ENST00000379018 GCNT4Q9P109 453 aa19.06■□□□□ 0.64
PDLIM4-202ENST00000379018 GON4LQ3T8J9 2241 aa19.06■□□□□ 0.64
PDLIM4-202ENST00000379018 ASCC3Q8N3C0 2202 aaKnown RBP19.06■□□□□ 0.64
PDLIM4-202ENST00000379018 ATXN2Q99700 1313 aaKnown RBP19.05■□□□□ 0.64
PDLIM4-202ENST00000379018 K7EQS6 105 aa19.05■□□□□ 0.64
PDLIM4-202ENST00000379018 ATP2C2O75185 946 aa19.05■□□□□ 0.64
PDLIM4-202ENST00000379018 GCNT3O95395 438 aa19.05■□□□□ 0.64
PDLIM4-202ENST00000379018 ABL1P00519 1130 aa19.05■□□□□ 0.64
PDLIM4-202ENST00000379018 LONP1P36776 959 aaKnown RBP19.05■□□□□ 0.64
PDLIM4-202ENST00000379018 MAPK8P45983 427 aa19.05■□□□□ 0.64
PDLIM4-202ENST00000379018 C11orf74Q86VG3 221 aa19.05■□□□□ 0.64
PDLIM4-202ENST00000379018 SFTPA1Q8IWL2 248 aa19.05■□□□□ 0.64
PDLIM4-202ENST00000379018 SYCP3Q8IZU3 236 aa19.05■□□□□ 0.64
PDLIM4-202ENST00000379018 CCDC26Q8TAB7 109 aa19.05■□□□□ 0.64
PDLIM4-202ENST00000379018 CNOT6LQ96LI5 555 aaKnown RBP19.05■□□□□ 0.64
PDLIM4-202ENST00000379018 PKMYT1Q99640 499 aa19.05■□□□□ 0.64
PDLIM4-202ENST00000379018 SCNM1Q9BWG6 230 aa19.05■□□□□ 0.64
PDLIM4-202ENST00000379018 PCIF1Q9H4Z3 704 aa19.05■□□□□ 0.64
PDLIM4-202ENST00000379018 ZDHHC4Q9NPG8 344 aa19.05■□□□□ 0.64
PDLIM4-202ENST00000379018 SMPD4Q9NXE4 827 aa19.05■□□□□ 0.64
PDLIM4-202ENST00000379018 BCCIPQ9P287 314 aaKnown RBP eCLIP19.05■□□□□ 0.64
PDLIM4-202ENST00000379018 EXOC7Q9UPT5 735 aa19.05■□□□□ 0.64
PDLIM4-202ENST00000379018 R3HCC1Q9Y3T6 440 aaKnown RBP19.05■□□□□ 0.64
PDLIM4-202ENST00000379018 MYOFQ9NZM1 2061 aa19.04■□□□□ 0.64
PDLIM4-202ENST00000379018 CDX4O14627 284 aaPredicted RBP19.04■□□□□ 0.64
PDLIM4-202ENST00000379018 MAP3K13O43283 966 aa19.04■□□□□ 0.64
PDLIM4-202ENST00000379018 TMEM191BP0C7N4 346 aa19.04■□□□□ 0.64
PDLIM4-202ENST00000379018 PCSK1P29120 753 aa19.04■□□□□ 0.64
PDLIM4-202ENST00000379018 TIE1P35590 1138 aa19.04■□□□□ 0.64
PDLIM4-202ENST00000379018 GRIK1P39086 918 aa19.04■□□□□ 0.64
PDLIM4-202ENST00000379018 CYP27A1Q02318 531 aa19.04■□□□□ 0.64
PDLIM4-202ENST00000379018 COL9A2Q14055 689 aaPredicted RBP19.04■□□□□ 0.64
PDLIM4-202ENST00000379018 TRIM61Q5EBN2 209 aa19.04■□□□□ 0.64
PDLIM4-202ENST00000379018 FILIP1Q7Z7B0 1213 aa19.04■□□□□ 0.64
PDLIM4-202ENST00000379018 ALLCQ8N6M5 410 aa19.04■□□□□ 0.64
PDLIM4-202ENST00000379018 MYLPFQ96A32 169 aa19.04■□□□□ 0.64
PDLIM4-202ENST00000379018 HVCN1Q96D96 273 aa19.04■□□□□ 0.64
PDLIM4-202ENST00000379018 EPSTI1Q96J88 318 aa19.04■□□□□ 0.64
PDLIM4-202ENST00000379018 ACCSQ96QU6 501 aa19.04■□□□□ 0.64
PDLIM4-202ENST00000379018 SYT15Q9BQS2 421 aa19.04■□□□□ 0.64
PDLIM4-202ENST00000379018 ST6GALNAC4Q9H4F1 302 aa19.04■□□□□ 0.64
PDLIM4-202ENST00000379018 PDE11AQ9HCR9 933 aa19.04■□□□□ 0.64
PDLIM4-202ENST00000379018 MMP17Q9ULZ9 603 aa19.04■□□□□ 0.64
PDLIM4-202ENST00000379018 ARHGAP26Q9UNA1 814 aa19.04■□□□□ 0.64
PDLIM4-202ENST00000379018 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.03■□□□□ 0.64
PDLIM4-202ENST00000379018 LEFTY2O00292 366 aa19.03■□□□□ 0.64
PDLIM4-202ENST00000379018 ALDH1A2O94788 518 aa19.03■□□□□ 0.64
PDLIM4-202ENST00000379018 KLF8O95600 359 aaPredicted RBP19.03■□□□□ 0.64
PDLIM4-202ENST00000379018 HOXB3P14651 431 aaPredicted RBP19.03■□□□□ 0.64
PDLIM4-202ENST00000379018 HNRNPLP14866 589 aaKnown RBP eCLIP19.03■□□□□ 0.64
PDLIM4-202ENST00000379018 BDNFP23560 247 aa19.03■□□□□ 0.64
PDLIM4-202ENST00000379018 ANXA13P27216 316 aa19.03■□□□□ 0.64
PDLIM4-202ENST00000379018 LHX1P48742 406 aa19.03■□□□□ 0.64
PDLIM4-202ENST00000379018 USP46P62068 366 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms