RNA–Protein interactions for RNA: ENST00000378513.7

RER1-203, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 3 BASIC

Gene RER1, Length 3,000 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-203ENST00000378513 UBN1Q9NPG3 1134 aa16.16■□□□□ 0.18
RER1-203ENST00000378513 TCRBV5S1A1TA0A578 114 aa16.15■□□□□ 0.18
RER1-203ENST00000378513 CALB1P05937 261 aa16.15■□□□□ 0.18
RER1-203ENST00000378513 SESN3P58005 492 aa16.15■□□□□ 0.18
RER1-203ENST00000378513 SCYL2Q6P3W7 929 aa16.15■□□□□ 0.18
RER1-203ENST00000378513 FBXO16Q8IX29 292 aaPredicted RBP16.15■□□□□ 0.18
RER1-203ENST00000378513 CPB2Q96IY4 423 aa16.15■□□□□ 0.18
RER1-203ENST00000378513 ACO2Q99798 780 aaKnown RBP16.15■□□□□ 0.18
RER1-203ENST00000378513 MRPL4Q9BYD3 311 aaKnown RBP16.15■□□□□ 0.18
RER1-203ENST00000378513 GINS2Q9Y248 185 aa16.15■□□□□ 0.18
RER1-203ENST00000378513 A0A0G2JND7 137 aa16.15■□□□□ 0.18
RER1-203ENST00000378513 NOP56O00567 594 aaKnown RBP16.15■□□□□ 0.18
RER1-203ENST00000378513 HOXC6P09630 235 aa16.15■□□□□ 0.18
RER1-203ENST00000378513 SPARCL1Q14515 664 aa16.15■□□□□ 0.18
RER1-203ENST00000378513 PLEKHG4Q58EX7 1191 aa16.15■□□□□ 0.18
RER1-203ENST00000378513 ZNF772Q68DY9 489 aaPredicted RBP16.15■□□□□ 0.18
RER1-203ENST00000378513 PTPRN2Q92932 1015 aa16.15■□□□□ 0.18
RER1-203ENST00000378513 KLRG1Q96E93 195 aa16.15■□□□□ 0.18
RER1-203ENST00000378513 VCPIP1Q96JH7 1222 aa16.15■□□□□ 0.18
RER1-203ENST00000378513 PAFAH2Q99487 392 aa16.15■□□□□ 0.18
RER1-203ENST00000378513 LPIN3Q9BQK8 851 aa16.15■□□□□ 0.18
RER1-203ENST00000378513 NRBP2Q9NSY0 501 aa16.15■□□□□ 0.18
RER1-203ENST00000378513 ITGB3P05106 788 aa16.14■□□□□ 0.17
RER1-203ENST00000378513 NEFHP12036 1026 aa16.14■□□□□ 0.17
RER1-203ENST00000378513 SEPT7Q16181 437 aaKnown RBP16.14■□□□□ 0.17
RER1-203ENST00000378513 CAPRIN2Q6IMN6 1127 aaKnown RBP16.14■□□□□ 0.17
RER1-203ENST00000378513 OTOAQ7RTW8 1153 aa16.14■□□□□ 0.17
RER1-203ENST00000378513 PALM2Q8IXS6 379 aa16.14■□□□□ 0.17
RER1-203ENST00000378513 C12orf29Q8N999 325 aa16.14■□□□□ 0.17
RER1-203ENST00000378513 TCP10LQ8TDR4 215 aa16.14■□□□□ 0.17
RER1-203ENST00000378513 XYLT2Q9H1B5 865 aa16.14■□□□□ 0.17
RER1-203ENST00000378513 NKX1-2Q9UD57 310 aaPredicted RBP16.14■□□□□ 0.17
RER1-203ENST00000378513 XPO7Q9UIA9 1087 aaKnown RBP16.14■□□□□ 0.17
RER1-203ENST00000378513 C3orf70A6NLC5 250 aaPredicted RBP16.14■□□□□ 0.17
RER1-203ENST00000378513 HMGB2P26583 209 aaKnown RBP16.14■□□□□ 0.17
RER1-203ENST00000378513 MIPP30301 263 aa16.14■□□□□ 0.17
RER1-203ENST00000378513 MCCD1P59942 119 aaPredicted RBP16.14■□□□□ 0.17
RER1-203ENST00000378513 SATB1Q01826 763 aa16.14■□□□□ 0.17
RER1-203ENST00000378513 LRRC6Q86X45 466 aa16.14■□□□□ 0.17
RER1-203ENST00000378513 RFWD2Q8NHY2 731 aa16.14■□□□□ 0.17
RER1-203ENST00000378513 DENND1AQ8TEH3 1009 aa16.14■□□□□ 0.17
RER1-203ENST00000378513 LRRC37BQ96QE4 947 aa16.14■□□□□ 0.17
RER1-203ENST00000378513 RABGEF1Q9UJ41 708 aa16.14■□□□□ 0.17
RER1-203ENST00000378513 HEY1Q9Y5J3 304 aa16.14■□□□□ 0.17
RER1-203ENST00000378513 M0QYV0 167 aa16.13■□□□□ 0.17
RER1-203ENST00000378513 OGTO15294 1046 aa16.13■□□□□ 0.17
RER1-203ENST00000378513 RBP3P10745 1247 aa16.13■□□□□ 0.17
RER1-203ENST00000378513 EPHB2P29323 1055 aa16.13■□□□□ 0.17
RER1-203ENST00000378513 EIF3EP60228 445 aaKnown RBP16.13■□□□□ 0.17
RER1-203ENST00000378513 SLC25A11Q02978 314 aaKnown RBP16.13■□□□□ 0.17
RER1-203ENST00000378513 TAF11Q15544 211 aa16.13■□□□□ 0.17
RER1-203ENST00000378513 WDR49Q8IV35 697 aa16.13■□□□□ 0.17
RER1-203ENST00000378513 SPATA18Q8TC71 538 aa16.13■□□□□ 0.17
RER1-203ENST00000378513 CFAP36Q96G28 342 aa16.13■□□□□ 0.17
RER1-203ENST00000378513 CXCL16Q9H2A7 254 aa16.13■□□□□ 0.17
RER1-203ENST00000378513 PDGFCQ9NRA1 345 aa16.13■□□□□ 0.17
RER1-203ENST00000378513 HOXC10Q9NYD6 342 aa16.13■□□□□ 0.17
RER1-203ENST00000378513 ADAMTS5Q9UNA0 930 aa16.13■□□□□ 0.17
RER1-203ENST00000378513 TCEA3O75764 348 aa16.13■□□□□ 0.17
RER1-203ENST00000378513 YWHAGP61981 247 aaKnown RBP eCLIP16.13■□□□□ 0.17
RER1-203ENST00000378513 TARBP2Q15633 366 aaKnown RBP16.13■□□□□ 0.17
RER1-203ENST00000378513 SGSM1Q2NKQ1 1148 aa16.13■□□□□ 0.17
RER1-203ENST00000378513 PPP1R15BQ5SWA1 713 aa16.13■□□□□ 0.17
RER1-203ENST00000378513 FAM102AQ5T9C2 384 aaPredicted RBP16.13■□□□□ 0.17
RER1-203ENST00000378513 RFX8Q6ZV50 586 aa16.13■□□□□ 0.17
RER1-203ENST00000378513 MTDHQ86UE4 582 aaKnown RBP16.13■□□□□ 0.17
RER1-203ENST00000378513 UBR7Q8N806 425 aa16.13■□□□□ 0.17
RER1-203ENST00000378513 TTC17Q96AE7 1141 aa16.13■□□□□ 0.17
RER1-203ENST00000378513 PEBP4Q96S96 227 aa16.13■□□□□ 0.17
RER1-203ENST00000378513 PIH1D1Q9NWS0 290 aaKnown RBP16.13■□□□□ 0.17
RER1-203ENST00000378513 CNTN6Q9UQ52 1028 aa16.13■□□□□ 0.17
RER1-203ENST00000378513 ARID2Q68CP9 1835 aa16.13■□□□□ 0.17
RER1-203ENST00000378513 ALOX15BO15296 676 aa16.13■□□□□ 0.17
RER1-203ENST00000378513 KDELR1P24390 212 aa16.13■□□□□ 0.17
RER1-203ENST00000378513 ZNF268Q14587 947 aaPredicted RBP16.13■□□□□ 0.17
RER1-203ENST00000378513 MORF4L2Q15014 288 aa16.13■□□□□ 0.17
RER1-203ENST00000378513 TAF1BQ53T94 588 aaPredicted RBP16.13■□□□□ 0.17
RER1-203ENST00000378513 CTAGE3PQ8IX95 158 aa16.13■□□□□ 0.17
RER1-203ENST00000378513 SLC35B2Q8TB61 432 aa16.13■□□□□ 0.17
RER1-203ENST00000378513 ZNF75CPQ92670 426 aaPredicted RBP16.13■□□□□ 0.17
RER1-203ENST00000378513 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.13■□□□□ 0.17
RER1-203ENST00000378513 SIX4Q9UIU6 781 aa16.13■□□□□ 0.17
RER1-203ENST00000378513 CPSF3Q9UKF6 684 aaKnown RBP16.13■□□□□ 0.17
RER1-203ENST00000378513 ZMYND8Q9ULU4 1186 aaPredicted RBP16.13■□□□□ 0.17
RER1-203ENST00000378513 CFAP73A6NFT4 308 aa16.12■□□□□ 0.17
RER1-203ENST00000378513 GPR25O00155 361 aa16.12■□□□□ 0.17
RER1-203ENST00000378513 ATG7O95352 703 aa16.12■□□□□ 0.17
RER1-203ENST00000378513 PIGRP01833 764 aa16.12■□□□□ 0.17
RER1-203ENST00000378513 ELK3P41970 407 aa16.12■□□□□ 0.17
RER1-203ENST00000378513 SARNPP82979 210 aaKnown RBP16.12■□□□□ 0.17
RER1-203ENST00000378513 LMNB2Q03252 620 aa16.12■□□□□ 0.17
RER1-203ENST00000378513 PIGHQ14442 188 aaPredicted RBP16.12■□□□□ 0.17
RER1-203ENST00000378513 ATF7IP2Q5U623 682 aa16.12■□□□□ 0.17
RER1-203ENST00000378513 HEXIM2Q96MH2 286 aaKnown RBP16.12■□□□□ 0.17
RER1-203ENST00000378513 ELOVL4Q9GZR5 314 aa16.12■□□□□ 0.17
RER1-203ENST00000378513 ZNF395Q9H8N7 513 aaPredicted RBP16.12■□□□□ 0.17
RER1-203ENST00000378513 ARHGEF3Q9NR81 526 aa16.12■□□□□ 0.17
RER1-203ENST00000378513 PSMC3IPQ9P2W1 217 aaPredicted RBP16.12■□□□□ 0.17
RER1-203ENST00000378513 ATP2A1O14983 1001 aa16.12■□□□□ 0.17
RER1-203ENST00000378513 MAFO75444 373 aaPredicted RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms