RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 RFPL4BQ6ZWI9 263 aa12.25□□□□□ -0.45
NPHP4-202ENST00000378161 USP49Q70CQ1 688 aa12.25□□□□□ -0.45
NPHP4-202ENST00000378161 BRINP3Q76B58 766 aa12.25□□□□□ -0.45
NPHP4-202ENST00000378161 ASRGL1Q7L266 308 aa12.25□□□□□ -0.45
NPHP4-202ENST00000378161 SEMA4AQ9H3S1 761 aa12.25□□□□□ -0.45
NPHP4-202ENST00000378161 TMEM206Q9H813 350 aa12.25□□□□□ -0.45
NPHP4-202ENST00000378161 PLK2Q9NYY3 685 aa12.25□□□□□ -0.45
NPHP4-202ENST00000378161 F8W810 466 aa12.25□□□□□ -0.45
NPHP4-202ENST00000378161 M0R3G1 203 aa12.25□□□□□ -0.45
NPHP4-202ENST00000378161 RIMBP2O15034 1052 aa12.25□□□□□ -0.45
NPHP4-202ENST00000378161 USP12O75317 370 aa12.25□□□□□ -0.45
NPHP4-202ENST00000378161 FLOT2Q14254 428 aa12.25□□□□□ -0.45
NPHP4-202ENST00000378161 LRRC41Q15345 812 aa12.25□□□□□ -0.45
NPHP4-202ENST00000378161 SUSD4Q5VX71 490 aa12.25□□□□□ -0.45
NPHP4-202ENST00000378161 CRLF3Q8IUI8 442 aa12.25□□□□□ -0.45
NPHP4-202ENST00000378161 VPS45Q9NRW7 570 aa12.25□□□□□ -0.45
NPHP4-202ENST00000378161 SNX9Q9Y5X1 595 aa12.25□□□□□ -0.45
NPHP4-202ENST00000378161 RARGP13631 454 aa12.24□□□□□ -0.45
NPHP4-202ENST00000378161 ITIH1P19827 911 aa12.24□□□□□ -0.45
NPHP4-202ENST00000378161 ZNF846Q147U1 533 aa12.24□□□□□ -0.45
NPHP4-202ENST00000378161 ASPRV1Q53RT3 343 aa12.24□□□□□ -0.45
NPHP4-202ENST00000378161 MFSD14BQ5SR56 506 aa12.24□□□□□ -0.45
NPHP4-202ENST00000378161 ZBTB46Q86UZ6 589 aa12.24□□□□□ -0.45
NPHP4-202ENST00000378161 JAMLQ86YT9 394 aa12.24□□□□□ -0.45
NPHP4-202ENST00000378161 FBXO25Q8TCJ0 367 aa12.24□□□□□ -0.45
NPHP4-202ENST00000378161 PPP4R1Q8TF05 950 aa12.24□□□□□ -0.45
NPHP4-202ENST00000378161 KBTBD7Q8WVZ9 684 aa12.24□□□□□ -0.45
NPHP4-202ENST00000378161 TTC17Q96AE7 1141 aa12.24□□□□□ -0.45
NPHP4-202ENST00000378161 CALN1Q9BXU9 219 aa12.24□□□□□ -0.45
NPHP4-202ENST00000378161 CADM1Q9BY67 442 aaKnown RBP12.24□□□□□ -0.45
NPHP4-202ENST00000378161 ARMC1Q9NVT9 282 aa12.24□□□□□ -0.45
NPHP4-202ENST00000378161 KIAA1024Q9UPX6 916 aa12.24□□□□□ -0.45
NPHP4-202ENST00000378161 RIMBP3CA6NJZ7 1639 aa12.24□□□□□ -0.45
NPHP4-202ENST00000378161 RIMBP3BA6NNM3 1639 aa12.24□□□□□ -0.45
NPHP4-202ENST00000378161 RIMBP3Q9UFD9 1639 aa12.24□□□□□ -0.45
NPHP4-202ENST00000378161 OVOS2A0A0G2JMS6 1433 aa12.24□□□□□ -0.45
NPHP4-202ENST00000378161 SSU72P8A0A1W2PR75 194 aa12.24□□□□□ -0.45
NPHP4-202ENST00000378161 RAD51BO15315 384 aa12.24□□□□□ -0.45
NPHP4-202ENST00000378161 RNASEH1O60930 286 aaKnown RBP12.24□□□□□ -0.45
NPHP4-202ENST00000378161 ARHGEF15O94989 841 aa12.24□□□□□ -0.45
NPHP4-202ENST00000378161 CSF1RP07333 972 aa12.24□□□□□ -0.45
NPHP4-202ENST00000378161 PLS3P13797 630 aa12.24□□□□□ -0.45
NPHP4-202ENST00000378161 RAG1P15918 1043 aa12.24□□□□□ -0.45
NPHP4-202ENST00000378161 NR4A1P22736 598 aa12.24□□□□□ -0.45
NPHP4-202ENST00000378161 COX10Q12887 443 aa12.24□□□□□ -0.45
NPHP4-202ENST00000378161 OVGP1Q12889 678 aa12.24□□□□□ -0.45
NPHP4-202ENST00000378161 HP1BP3Q5SSJ5 553 aaPredicted RBP12.24□□□□□ -0.45
NPHP4-202ENST00000378161 FOXP4Q8IVH2 680 aaPredicted RBP12.24□□□□□ -0.45
NPHP4-202ENST00000378161 PMEPA1Q969W9 287 aa12.24□□□□□ -0.45
NPHP4-202ENST00000378161 GPBP1L1Q9HC44 474 aaPredicted RBP12.24□□□□□ -0.45
NPHP4-202ENST00000378161 SLIT1O75093 1534 aa12.24□□□□□ -0.45
NPHP4-202ENST00000378161 FRMPD2Q68DX3 1309 aaPredicted RBP12.24□□□□□ -0.45
NPHP4-202ENST00000378161 UGT1A9O60656 530 aa12.24□□□□□ -0.45
NPHP4-202ENST00000378161 UGT1A6P19224 532 aa12.24□□□□□ -0.45
NPHP4-202ENST00000378161 UGT1A1P22309 533 aa12.24□□□□□ -0.45
NPHP4-202ENST00000378161 UGT1A4P22310 534 aa12.24□□□□□ -0.45
NPHP4-202ENST00000378161 UGT1A3P35503 534 aa12.24□□□□□ -0.45
NPHP4-202ENST00000378161 UGT1A5P35504 534 aa12.24□□□□□ -0.45
NPHP4-202ENST00000378161 FDFT1P37268 417 aa12.24□□□□□ -0.45
NPHP4-202ENST00000378161 PIK3CAP42336 1068 aa12.24□□□□□ -0.45
NPHP4-202ENST00000378161 NAMPTP43490 491 aa12.24□□□□□ -0.45
NPHP4-202ENST00000378161 ESX1Q8N693 406 aa12.24□□□□□ -0.45
NPHP4-202ENST00000378161 INPP4AQ96PE3 977 aaPredicted RBP12.24□□□□□ -0.45
NPHP4-202ENST00000378161 ZSCAN5AQ9BUG6 496 aa12.24□□□□□ -0.45
NPHP4-202ENST00000378161 EPB41L1Q9H4G0 881 aa12.24□□□□□ -0.45
NPHP4-202ENST00000378161 UGT1A7Q9HAW7 530 aa12.24□□□□□ -0.45
NPHP4-202ENST00000378161 UGT1A10Q9HAW8 530 aa12.24□□□□□ -0.45
NPHP4-202ENST00000378161 UGT1A8Q9HAW9 530 aa12.24□□□□□ -0.45
NPHP4-202ENST00000378161 TUFT1Q9NNX1 390 aa12.24□□□□□ -0.45
NPHP4-202ENST00000378161 PVALEFA0A1B0GWK0 134 aa12.23□□□□□ -0.45
NPHP4-202ENST00000378161 PDZK1P1A8MUH7 402 aa12.23□□□□□ -0.45
NPHP4-202ENST00000378161 CFLARO15519 480 aa12.23□□□□□ -0.45
NPHP4-202ENST00000378161 SPATA31D3P0C874 917 aa12.23□□□□□ -0.45
NPHP4-202ENST00000378161 IL12RB1P42701 662 aa12.23□□□□□ -0.45
NPHP4-202ENST00000378161 NAB2Q15742 525 aa12.23□□□□□ -0.45
NPHP4-202ENST00000378161 SPATA31D4Q6ZUB0 917 aa12.23□□□□□ -0.45
NPHP4-202ENST00000378161 PALM2Q8IXS6 379 aa12.23□□□□□ -0.45
NPHP4-202ENST00000378161 SLC22A8Q8TCC7 542 aa12.23□□□□□ -0.45
NPHP4-202ENST00000378161 ZNF507Q8TCN5 953 aa12.23□□□□□ -0.45
NPHP4-202ENST00000378161 ANKS1AQ92625 1134 aa12.23□□□□□ -0.45
NPHP4-202ENST00000378161 SERHL2Q9H4I8 314 aa12.23□□□□□ -0.45
NPHP4-202ENST00000378161 GPAMQ9HCL2 828 aa12.23□□□□□ -0.45
NPHP4-202ENST00000378161 CCNL1Q9UK58 526 aaPredicted RBP12.23□□□□□ -0.45
NPHP4-202ENST00000378161 AP4B1Q9Y6B7 739 aa12.23□□□□□ -0.45
NPHP4-202ENST00000378161 MAGEB16A2A368 324 aa12.23□□□□□ -0.45
NPHP4-202ENST00000378161 HAT1O14929 419 aa12.23□□□□□ -0.45
NPHP4-202ENST00000378161 TLR2O60603 784 aa12.23□□□□□ -0.45
NPHP4-202ENST00000378161 CCNKO75909 580 aa12.23□□□□□ -0.45
NPHP4-202ENST00000378161 USP17L8P0C7I0 530 aa12.23□□□□□ -0.45
NPHP4-202ENST00000378161 DBTP11182 482 aaKnown RBP12.23□□□□□ -0.45
NPHP4-202ENST00000378161 HOXD13P35453 343 aa12.23□□□□□ -0.45
NPHP4-202ENST00000378161 BTDP43251 543 aa12.23□□□□□ -0.45
NPHP4-202ENST00000378161 HIRAP54198 1017 aaPredicted RBP12.23□□□□□ -0.45
NPHP4-202ENST00000378161 LPCAT4Q643R3 524 aa12.23□□□□□ -0.45
NPHP4-202ENST00000378161 VASH1Q7L8A9 365 aaPredicted RBP12.23□□□□□ -0.45
NPHP4-202ENST00000378161 MINDY2Q8NBR6 621 aa12.23□□□□□ -0.45
NPHP4-202ENST00000378161 ANKK1Q8NFD2 765 aa12.23□□□□□ -0.45
NPHP4-202ENST00000378161 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.23□□□□□ -0.45
NPHP4-202ENST00000378161 HSPH1Q92598 858 aa12.23□□□□□ -0.45
NPHP4-202ENST00000378161 FLT1P17948 1338 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms