RNA–Protein interactions for RNA: ENST00000377942.7

PCDH8-202, Transcript of protocadherin 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-202ENST00000377942 ASMTLO95671 621 aa20.49■□□□□ 0.87
PCDH8-202ENST00000377942 MAP4P27816 1152 aaKnown RBP20.49■□□□□ 0.87
PCDH8-202ENST00000377942 RGS4P49798 205 aa20.49■□□□□ 0.87
PCDH8-202ENST00000377942 C1orf186Q6ZWK4 172 aa20.49■□□□□ 0.87
PCDH8-202ENST00000377942 LRP10Q7Z4F1 713 aa20.49■□□□□ 0.87
PCDH8-202ENST00000377942 TBC1D19Q8N5T2 526 aa20.49■□□□□ 0.87
PCDH8-202ENST00000377942 FAM172AQ8WUF8 416 aa20.49■□□□□ 0.87
PCDH8-202ENST00000377942 SYT15Q9BQS2 421 aa20.49■□□□□ 0.87
PCDH8-202ENST00000377942 MRPL9Q9BYD2 267 aaKnown RBP20.49■□□□□ 0.87
PCDH8-202ENST00000377942 CDK5RAP1Q96SZ6 601 aaKnown RBP20.49■□□□□ 0.87
PCDH8-202ENST00000377942 MRGBPQ9NV56 204 aa20.49■□□□□ 0.87
PCDH8-202ENST00000377942 TRPA1O75762 1119 aa20.49■□□□□ 0.87
PCDH8-202ENST00000377942 AKT1P31749 480 aa20.49■□□□□ 0.87
PCDH8-202ENST00000377942 PCBP1Q15365 356 aaKnown RBP eCLIP20.49■□□□□ 0.87
PCDH8-202ENST00000377942 SDE2Q6IQ49 451 aa20.49■□□□□ 0.87
PCDH8-202ENST00000377942 CINPQ9BW66 212 aaPredicted RBP20.49■□□□□ 0.87
PCDH8-202ENST00000377942 SIGLEC1Q9BZZ2 1709 aa20.49■□□□□ 0.87
PCDH8-202ENST00000377942 PMS1P54277 932 aaKnown RBP20.49■□□□□ 0.87
PCDH8-202ENST00000377942 DMTNQ08495 405 aa20.49■□□□□ 0.87
PCDH8-202ENST00000377942 LBRQ14739 615 aaKnown RBP20.49■□□□□ 0.87
PCDH8-202ENST00000377942 PCSK7Q16549 785 aa20.49■□□□□ 0.87
PCDH8-202ENST00000377942 ARHGAP20Q9P2F6 1191 aa20.49■□□□□ 0.87
PCDH8-202ENST00000377942 CHORDC1Q9UHD1 332 aaPredicted RBP20.49■□□□□ 0.87
PCDH8-202ENST00000377942 NRCAMQ92823 1304 aa20.48■□□□□ 0.87
PCDH8-202ENST00000377942 H0Y626 953 aa20.48■□□□□ 0.87
PCDH8-202ENST00000377942 PAEPP09466 180 aa20.48■□□□□ 0.87
PCDH8-202ENST00000377942 SYTL3Q4VX76 610 aa20.48■□□□□ 0.87
PCDH8-202ENST00000377942 DUSP9Q99956 384 aaKnown RBP20.48■□□□□ 0.87
PCDH8-202ENST00000377942 CHUKO15111 745 aa20.48■□□□□ 0.87
PCDH8-202ENST00000377942 PTK7Q13308 1070 aa20.48■□□□□ 0.87
PCDH8-202ENST00000377942 ORC1Q13415 861 aa20.48■□□□□ 0.87
PCDH8-202ENST00000377942 STAMBPL1Q96FJ0 436 aa20.48■□□□□ 0.87
PCDH8-202ENST00000377942 GPR63Q9BZJ6 419 aa20.48■□□□□ 0.87
PCDH8-202ENST00000377942 TRIM45Q9H8W5 580 aaPredicted RBP20.48■□□□□ 0.87
PCDH8-202ENST00000377942 SMARCAL1Q9NZC9 954 aa20.48■□□□□ 0.87
PCDH8-202ENST00000377942 MON2Q7Z3U7 1717 aa20.48■□□□□ 0.87
PCDH8-202ENST00000377942 RBBP7Q16576 425 aa20.48■□□□□ 0.87
PCDH8-202ENST00000377942 KYNUQ16719 465 aa20.48■□□□□ 0.87
PCDH8-202ENST00000377942 OVOS1Q6IE37 1185 aa20.48■□□□□ 0.87
PCDH8-202ENST00000377942 C11orf63Q6NUN7 778 aa20.48■□□□□ 0.87
PCDH8-202ENST00000377942 SLC47A2Q86VL8 602 aa20.48■□□□□ 0.87
PCDH8-202ENST00000377942 NCLNQ969V3 563 aa20.48■□□□□ 0.87
PCDH8-202ENST00000377942 AAR2Q9Y312 384 aaKnown RBP20.48■□□□□ 0.87
PCDH8-202ENST00000377942 PPP1R37O75864 691 aa20.48■□□□□ 0.87
PCDH8-202ENST00000377942 ZNF268Q14587 947 aaPredicted RBP20.48■□□□□ 0.87
PCDH8-202ENST00000377942 ELMO2Q96JJ3 720 aa20.48■□□□□ 0.87
PCDH8-202ENST00000377942 NAT9Q9BTE0 207 aa20.48■□□□□ 0.87
PCDH8-202ENST00000377942 CELF4Q9BZC1 486 aaKnown RBP20.48■□□□□ 0.87
PCDH8-202ENST00000377942 PCDHB12Q9Y5F1 795 aa20.48■□□□□ 0.87
PCDH8-202ENST00000377942 FAM47DPA6NHR8 397 aa20.47■□□□□ 0.87
PCDH8-202ENST00000377942 ATN1P54259 1190 aaPredicted RBP20.47■□□□□ 0.87
PCDH8-202ENST00000377942 MFN1Q8IWA4 741 aa20.47■□□□□ 0.87
PCDH8-202ENST00000377942 ACTRT1Q8TDG2 376 aa20.47■□□□□ 0.87
PCDH8-202ENST00000377942 MAF1Q9H063 256 aa20.47■□□□□ 0.87
PCDH8-202ENST00000377942 DDX43Q9NXZ2 648 aaKnown RBP20.47■□□□□ 0.87
PCDH8-202ENST00000377942 ATP11BQ9Y2G3 1177 aa20.47■□□□□ 0.87
PCDH8-202ENST00000377942 CARSP49589 748 aaKnown RBP20.47■□□□□ 0.87
PCDH8-202ENST00000377942 ARHGDIAP52565 204 aa20.47■□□□□ 0.87
PCDH8-202ENST00000377942 EPHB3P54753 998 aa20.47■□□□□ 0.87
PCDH8-202ENST00000377942 MDH1BQ5I0G3 518 aa20.47■□□□□ 0.87
PCDH8-202ENST00000377942 PAPD7Q5XG87 772 aaKnown RBP20.47■□□□□ 0.87
PCDH8-202ENST00000377942 TTC36A6NLP5 189 aa20.47■□□□□ 0.87
PCDH8-202ENST00000377942 KCNA2P16389 499 aa20.47■□□□□ 0.87
PCDH8-202ENST00000377942 MDH1P40925 334 aaKnown RBP20.47■□□□□ 0.87
PCDH8-202ENST00000377942 SMAD1Q15797 465 aaKnown RBP20.47■□□□□ 0.87
PCDH8-202ENST00000377942 PAN2Q504Q3 1202 aaKnown RBP20.47■□□□□ 0.87
PCDH8-202ENST00000377942 SYCP2LQ5T4T6 812 aa20.47■□□□□ 0.87
PCDH8-202ENST00000377942 CCDC60Q8IWA6 550 aaPredicted RBP20.47■□□□□ 0.87
PCDH8-202ENST00000377942 DDIASQ8IXT1 998 aa20.47■□□□□ 0.87
PCDH8-202ENST00000377942 ZNF606Q8WXB4 792 aa20.47■□□□□ 0.87
PCDH8-202ENST00000377942 TATDN2Q93075 761 aa20.47■□□□□ 0.87
PCDH8-202ENST00000377942 TBCBQ99426 244 aa20.47■□□□□ 0.87
PCDH8-202ENST00000377942 PKP3Q9Y446 797 aa20.47■□□□□ 0.87
PCDH8-202ENST00000377942 RAP1GAPP47736 663 aa20.47■□□□□ 0.87
PCDH8-202ENST00000377942 LONRF1Q17RB8 773 aa20.47■□□□□ 0.87
PCDH8-202ENST00000377942 TRAPPC12Q8WVT3 735 aa20.47■□□□□ 0.87
PCDH8-202ENST00000377942 FAM118BQ9BPY3 351 aa20.47■□□□□ 0.87
PCDH8-202ENST00000377942 A0A087X0B3 334 aa20.46■□□□□ 0.87
PCDH8-202ENST00000377942 MBL2P11226 248 aaPredicted RBP20.46■□□□□ 0.87
PCDH8-202ENST00000377942 STX3Q13277 289 aa20.46■□□□□ 0.87
PCDH8-202ENST00000377942 TTC39BQ5VTQ0 682 aaPredicted RBP20.46■□□□□ 0.87
PCDH8-202ENST00000377942 SLC25A41Q8N5S1 370 aa20.46■□□□□ 0.87
PCDH8-202ENST00000377942 HAS1Q92839 578 aa20.46■□□□□ 0.87
PCDH8-202ENST00000377942 ZNF669Q96BR6 464 aaPredicted RBP20.46■□□□□ 0.87
PCDH8-202ENST00000377942 MAP2K2P36507 400 aa20.46■□□□□ 0.87
PCDH8-202ENST00000377942 ESRRGP62508 458 aa20.46■□□□□ 0.87
PCDH8-202ENST00000377942 KRT80Q6KB66 452 aa20.46■□□□□ 0.87
PCDH8-202ENST00000377942 PLPPR4Q7Z2D5 763 aa20.46■□□□□ 0.87
PCDH8-202ENST00000377942 UCMAQ8WVF2 138 aa20.46■□□□□ 0.87
PCDH8-202ENST00000377942 RXFP2Q8WXD0 754 aa20.46■□□□□ 0.87
PCDH8-202ENST00000377942 KLRG1Q96E93 195 aa20.46■□□□□ 0.87
PCDH8-202ENST00000377942 FBXO44Q9H4M3 255 aa20.46■□□□□ 0.87
PCDH8-202ENST00000377942 CPSF2Q9P2I0 782 aaKnown RBP20.46■□□□□ 0.87
PCDH8-202ENST00000377942 USP18Q9UMW8 372 aa20.46■□□□□ 0.87
PCDH8-202ENST00000377942 PCDHB5Q9Y5E4 795 aa20.46■□□□□ 0.87
PCDH8-202ENST00000377942 CSDE1O75534 798 aaKnown RBP20.46■□□□□ 0.87
PCDH8-202ENST00000377942 HMOX2P30519 316 aa20.46■□□□□ 0.87
PCDH8-202ENST00000377942 CHADLQ6NUI6 762 aa20.46■□□□□ 0.87
PCDH8-202ENST00000377942 ITIH5Q86UX2 942 aa20.46■□□□□ 0.87
PCDH8-202ENST00000377942 GRID1Q9ULK0 1009 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms