RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 SLC17A7Q9P2U7 560 aa13.55□□□□□ -0.24
USP11-204ENST00000377107 SLC12A4Q9UP95 1085 aa13.55□□□□□ -0.24
USP11-204ENST00000377107 NR2E3Q9Y5X4 410 aa13.55□□□□□ -0.24
USP11-204ENST00000377107 SOWAHBA6NEL2 793 aa13.55□□□□□ -0.24
USP11-204ENST00000377107 KCNN4O15554 427 aa13.55□□□□□ -0.24
USP11-204ENST00000377107 FAM155BO75949 473 aa13.55□□□□□ -0.24
USP11-204ENST00000377107 ATP2A2P16615 1042 aaKnown RBP13.55□□□□□ -0.24
USP11-204ENST00000377107 RTP1P59025 263 aa13.55□□□□□ -0.24
USP11-204ENST00000377107 YWHAEP62258 255 aaKnown RBP13.55□□□□□ -0.24
USP11-204ENST00000377107 MGAT5Q09328 741 aa13.55□□□□□ -0.24
USP11-204ENST00000377107 ATP11CQ8NB49 1132 aa13.55□□□□□ -0.24
USP11-204ENST00000377107 REPS2Q8NFH8 660 aa13.55□□□□□ -0.24
USP11-204ENST00000377107 NLRP7Q8WX94 980 aa13.55□□□□□ -0.24
USP11-204ENST00000377107 MAML1Q92585 1016 aa13.55□□□□□ -0.24
USP11-204ENST00000377107 KLRG1Q96E93 195 aa13.55□□□□□ -0.24
USP11-204ENST00000377107 ZBED3Q96IU2 234 aaPredicted RBP13.55□□□□□ -0.24
USP11-204ENST00000377107 FAM111AQ96PZ2 611 aa13.55□□□□□ -0.24
USP11-204ENST00000377107 RXFP1Q9HBX9 757 aa13.55□□□□□ -0.24
USP11-204ENST00000377107 CYTH4Q9UIA0 394 aa13.55□□□□□ -0.24
USP11-204ENST00000377107 NFASCO94856 1347 aa13.55□□□□□ -0.24
USP11-204ENST00000377107 PRPSAP2O60256 369 aa13.55□□□□□ -0.24
USP11-204ENST00000377107 ELK3P41970 407 aa13.55□□□□□ -0.24
USP11-204ENST00000377107 CPA2P48052 419 aa13.55□□□□□ -0.24
USP11-204ENST00000377107 EFNA5P52803 228 aa13.55□□□□□ -0.24
USP11-204ENST00000377107 KCTD2Q14681 263 aa13.55□□□□□ -0.24
USP11-204ENST00000377107 MTFR1Q15390 333 aa13.55□□□□□ -0.24
USP11-204ENST00000377107 GLRA4Q5JXX5 417 aa13.55□□□□□ -0.24
USP11-204ENST00000377107 MTDHQ86UE4 582 aaKnown RBP13.55□□□□□ -0.24
USP11-204ENST00000377107 LRRC6Q86X45 466 aa13.55□□□□□ -0.24
USP11-204ENST00000377107 KIAA0319LQ8IZA0 1049 aa13.55□□□□□ -0.24
USP11-204ENST00000377107 CCHCR1Q8TD31 782 aa13.55□□□□□ -0.24
USP11-204ENST00000377107 SLCO2A1Q92959 643 aa13.55□□□□□ -0.24
USP11-204ENST00000377107 TTC25Q96NG3 672 aa13.55□□□□□ -0.24
USP11-204ENST00000377107 FAM49AQ9H0Q0 323 aaPredicted RBP13.55□□□□□ -0.24
USP11-204ENST00000377107 A0A087WZ62 844 aa13.54□□□□□ -0.24
USP11-204ENST00000377107 MSCO60682 206 aa13.54□□□□□ -0.24
USP11-204ENST00000377107 ERBB2P04626 1255 aa13.54□□□□□ -0.24
USP11-204ENST00000377107 KRT7P08729 469 aa13.54□□□□□ -0.24
USP11-204ENST00000377107 GEMIN4P57678 1058 aaKnown RBP13.54□□□□□ -0.24
USP11-204ENST00000377107 SWT1Q5T5J6 900 aaKnown RBP13.54□□□□□ -0.24
USP11-204ENST00000377107 FDXACB1Q9BRP7 624 aaPredicted RBP13.54□□□□□ -0.24
USP11-204ENST00000377107 TRIM56Q9BRZ2 755 aaKnown RBP13.54□□□□□ -0.24
USP11-204ENST00000377107 SPATC1LQ9H0A9 340 aa13.54□□□□□ -0.24
USP11-204ENST00000377107 ZFP69BQ9UJL9 534 aa13.54□□□□□ -0.24
USP11-204ENST00000377107 BRWD3Q6RI45 1802 aa13.54□□□□□ -0.24
USP11-204ENST00000377107 CFAP73A6NFT4 308 aa13.54□□□□□ -0.24
USP11-204ENST00000377107 LACTBL1A8MY62 500 aa13.54□□□□□ -0.24
USP11-204ENST00000377107 ADM5C9JUS6 153 aa13.54□□□□□ -0.24
USP11-204ENST00000377107 LPXNO60711 386 aa13.54□□□□□ -0.24
USP11-204ENST00000377107 KDELR1P24390 212 aa13.54□□□□□ -0.24
USP11-204ENST00000377107 RFC5P40937 340 aa13.54□□□□□ -0.24
USP11-204ENST00000377107 MAP3K10Q02779 954 aa13.54□□□□□ -0.24
USP11-204ENST00000377107 BMPR2Q13873 1038 aa13.54□□□□□ -0.24
USP11-204ENST00000377107 MORF4L2Q15014 288 aa13.54□□□□□ -0.24
USP11-204ENST00000377107 TAF1BQ53T94 588 aaPredicted RBP13.54□□□□□ -0.24
USP11-204ENST00000377107 JADE1Q6IE81 842 aa13.54□□□□□ -0.24
USP11-204ENST00000377107 CGB2Q6NT52 195 aa13.54□□□□□ -0.24
USP11-204ENST00000377107 GBP7Q8N8V2 638 aaPredicted RBP13.54□□□□□ -0.24
USP11-204ENST00000377107 CLMNQ96JQ2 1002 aa13.54□□□□□ -0.24
USP11-204ENST00000377107 DDX56Q9NY93 547 aaKnown RBP13.54□□□□□ -0.24
USP11-204ENST00000377107 USP18Q9UMW8 372 aa13.54□□□□□ -0.24
USP11-204ENST00000377107 IRF6O14896 467 aa13.53□□□□□ -0.24
USP11-204ENST00000377107 MED7O43513 233 aa13.53□□□□□ -0.24
USP11-204ENST00000377107 UPP2O95045 317 aa13.53□□□□□ -0.24
USP11-204ENST00000377107 TROVE2P10155 538 aaKnown RBP eCLIP13.53□□□□□ -0.24
USP11-204ENST00000377107 ELF1P32519 619 aa13.53□□□□□ -0.24
USP11-204ENST00000377107 RCN2Q14257 317 aa13.53□□□□□ -0.24
USP11-204ENST00000377107 CCDC6Q16204 474 aa13.53□□□□□ -0.24
USP11-204ENST00000377107 RNASEH2BQ5TBB1 312 aaKnown RBP13.53□□□□□ -0.24
USP11-204ENST00000377107 IER5Q5VY09 327 aa13.53□□□□□ -0.24
USP11-204ENST00000377107 PPIL6Q8IXY8 311 aa13.53□□□□□ -0.24
USP11-204ENST00000377107 PPP1R14CQ8TAE6 165 aa13.53□□□□□ -0.24
USP11-204ENST00000377107 MICAL1Q8TDZ2 1067 aa13.53□□□□□ -0.24
USP11-204ENST00000377107 CPT1BQ92523 772 aa13.53□□□□□ -0.24
USP11-204ENST00000377107 LPIN3Q9BQK8 851 aa13.53□□□□□ -0.24
USP11-204ENST00000377107 GRID1Q9ULK0 1009 aa13.53□□□□□ -0.24
USP11-204ENST00000377107 STRIP2Q9ULQ0 834 aa13.53□□□□□ -0.24
USP11-204ENST00000377107 DOCK5Q9H7D0 1870 aa13.53□□□□□ -0.24
USP11-204ENST00000377107 ATAD5Q96QE3 1844 aa13.53□□□□□ -0.24
USP11-204ENST00000377107 MGRN1O60291 552 aa13.53□□□□□ -0.24
USP11-204ENST00000377107 TMEM63AO94886 807 aa13.53□□□□□ -0.24
USP11-204ENST00000377107 STAG3L1P0CL83 205 aa13.53□□□□□ -0.24
USP11-204ENST00000377107 EPHB2P29323 1055 aa13.53□□□□□ -0.24
USP11-204ENST00000377107 ROR1Q01973 937 aa13.53□□□□□ -0.24
USP11-204ENST00000377107 PTK7Q13308 1070 aa13.53□□□□□ -0.24
USP11-204ENST00000377107 MPZL3Q6UWV2 235 aa13.53□□□□□ -0.24
USP11-204ENST00000377107 CEP128Q6ZU80 1094 aa13.53□□□□□ -0.24
USP11-204ENST00000377107 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.53□□□□□ -0.24
USP11-204ENST00000377107 LONP2Q86WA8 852 aa13.53□□□□□ -0.24
USP11-204ENST00000377107 RXFP2Q8WXD0 754 aa13.53□□□□□ -0.24
USP11-204ENST00000377107 ZNF75CPQ92670 426 aaPredicted RBP13.53□□□□□ -0.24
USP11-204ENST00000377107 PIWIL1Q96J94 861 aaKnown RBP13.53□□□□□ -0.24
USP11-204ENST00000377107 COL2A1P02458 1487 aaPredicted RBP13.53□□□□□ -0.24
USP11-204ENST00000377107 MAFO75444 373 aaPredicted RBP13.53□□□□□ -0.24
USP11-204ENST00000377107 MICAL2O94851 1124 aa13.53□□□□□ -0.24
USP11-204ENST00000377107 GSTA1P08263 222 aa13.53□□□□□ -0.24
USP11-204ENST00000377107 PDGFRBP09619 1106 aa13.53□□□□□ -0.24
USP11-204ENST00000377107 GPX6P59796 221 aa13.53□□□□□ -0.24
USP11-204ENST00000377107 PREPLQ4J6C6 727 aaPredicted RBP13.53□□□□□ -0.24
USP11-204ENST00000377107 ANKRD20A3Q5VUR7 823 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms