RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 HEPACAM2A8MVW5 462 aa23.52■■□□□ 1.36
SRM-201ENST00000376957 GOLGA6L22H0YM25 854 aa23.52■■□□□ 1.36
SRM-201ENST00000376957 AOC1P19801 751 aa23.52■■□□□ 1.36
SRM-201ENST00000376957 FCARP24071 287 aa23.52■■□□□ 1.36
SRM-201ENST00000376957 RAP1GAPP47736 663 aa23.52■■□□□ 1.36
SRM-201ENST00000376957 PAK1Q13153 545 aa23.52■■□□□ 1.36
SRM-201ENST00000376957 MLF2Q15773 248 aaPredicted RBP23.52■■□□□ 1.36
SRM-201ENST00000376957 CAMK4Q16566 473 aa23.52■■□□□ 1.36
SRM-201ENST00000376957 SDHAF4Q5VUM1 108 aa23.52■■□□□ 1.36
SRM-201ENST00000376957 FRMD5Q7Z6J6 570 aa23.52■■□□□ 1.36
SRM-201ENST00000376957 ZC3H3Q8IXZ2 948 aaKnown RBP23.52■■□□□ 1.36
SRM-201ENST00000376957 CELF5Q8N6W0 485 aaKnown RBP23.52■■□□□ 1.36
SRM-201ENST00000376957 C8orf48Q96LL4 319 aa23.52■■□□□ 1.36
SRM-201ENST00000376957 DPEP3Q9H4B8 488 aa23.52■■□□□ 1.36
SRM-201ENST00000376957 FAM124BQ9H5Z6 455 aaPredicted RBP23.52■■□□□ 1.36
SRM-201ENST00000376957 TBC1D17Q9HA65 648 aa23.52■■□□□ 1.36
SRM-201ENST00000376957 IL21Q9HBE4 155 aa23.52■■□□□ 1.36
SRM-201ENST00000376957 TRIOO75962 3097 aa23.51■■□□□ 1.35
SRM-201ENST00000376957 KRBA1A5PL33 1030 aa23.51■■□□□ 1.35
SRM-201ENST00000376957 F11P03951 625 aa23.51■■□□□ 1.35
SRM-201ENST00000376957 GDI1P31150 447 aa23.51■■□□□ 1.35
SRM-201ENST00000376957 VIPR2P41587 438 aa23.51■■□□□ 1.35
SRM-201ENST00000376957 NDST1P52848 882 aa23.51■■□□□ 1.35
SRM-201ENST00000376957 PMS1P54277 932 aaKnown RBP23.51■■□□□ 1.35
SRM-201ENST00000376957 CYP4F8P98187 520 aa23.51■■□□□ 1.35
SRM-201ENST00000376957 GRM2Q14416 872 aa23.51■■□□□ 1.35
SRM-201ENST00000376957 VITQ6UXI7 678 aa23.51■■□□□ 1.35
SRM-201ENST00000376957 CMTM8Q8IZV2 173 aa23.51■■□□□ 1.35
SRM-201ENST00000376957 CRYBG2Q8N1P7 616 aa23.51■■□□□ 1.35
SRM-201ENST00000376957 CSGALNACT1Q8TDX6 532 aa23.51■■□□□ 1.35
SRM-201ENST00000376957 FAM122AQ96E09 287 aa23.51■■□□□ 1.35
SRM-201ENST00000376957 NELL2Q99435 816 aa23.51■■□□□ 1.35
SRM-201ENST00000376957 NT5C1AQ9BXI3 368 aa23.51■■□□□ 1.35
SRM-201ENST00000376957 BCO2Q9BYV7 579 aa23.51■■□□□ 1.35
SRM-201ENST00000376957 PLA2G2FQ9BZM2 168 aa23.51■■□□□ 1.35
SRM-201ENST00000376957 KIF9Q9HAQ2 790 aa23.51■■□□□ 1.35
SRM-201ENST00000376957 TRPV5Q9NQA5 729 aa23.51■■□□□ 1.35
SRM-201ENST00000376957 SIT1Q9Y3P8 196 aa23.51■■□□□ 1.35
SRM-201ENST00000376957 PPP1R3GB7ZBB8 358 aa23.5■■□□□ 1.35
SRM-201ENST00000376957 MAN2B1O00754 1011 aa23.5■■□□□ 1.35
SRM-201ENST00000376957 NCAM2O15394 837 aa23.5■■□□□ 1.35
SRM-201ENST00000376957 ASPAP45381 313 aa23.5■■□□□ 1.35
SRM-201ENST00000376957 PTPN5P54829 565 aa23.5■■□□□ 1.35
SRM-201ENST00000376957 VCPP55072 806 aaKnown RBP23.5■■□□□ 1.35
SRM-201ENST00000376957 STARD6P59095 220 aa23.5■■□□□ 1.35
SRM-201ENST00000376957 PLCB2Q00722 1185 aa23.5■■□□□ 1.35
SRM-201ENST00000376957 ARHGAP29Q52LW3 1261 aa23.5■■□□□ 1.35
SRM-201ENST00000376957 STXBP5Q5T5C0 1151 aa23.5■■□□□ 1.35
SRM-201ENST00000376957 SPOPLQ6IQ16 392 aa23.5■■□□□ 1.35
SRM-201ENST00000376957 C1orf228Q6PIY5 440 aa23.5■■□□□ 1.35
SRM-201ENST00000376957 CLEC17AQ6ZS10 378 aa23.5■■□□□ 1.35
SRM-201ENST00000376957 ACOT1Q86TX2 421 aa23.5■■□□□ 1.35
SRM-201ENST00000376957 MAB21L3Q8N8X9 362 aa23.5■■□□□ 1.35
SRM-201ENST00000376957 SMARCD1Q96GM5 515 aa23.5■■□□□ 1.35
SRM-201ENST00000376957 SLITRK1Q96PX8 696 aa23.5■■□□□ 1.35
SRM-201ENST00000376957 TRPM5Q9NZQ8 1165 aa23.5■■□□□ 1.35
SRM-201ENST00000376957 CTNND2Q9UQB3 1225 aa23.5■■□□□ 1.35
SRM-201ENST00000376957 F8VP50 259 aa23.49■■□□□ 1.35
SRM-201ENST00000376957 CHADO15335 359 aa23.49■■□□□ 1.35
SRM-201ENST00000376957 RTN3O95197 1032 aaPredicted RBP23.49■■□□□ 1.35
SRM-201ENST00000376957 YWHAEP62258 255 aaKnown RBP23.49■■□□□ 1.35
SRM-201ENST00000376957 ZNF852Q6ZMS4 543 aa23.49■■□□□ 1.35
SRM-201ENST00000376957 MON1AQ86VX9 555 aa23.49■■□□□ 1.35
SRM-201ENST00000376957 BPIFB1Q8TDL5 484 aa23.49■■□□□ 1.35
SRM-201ENST00000376957 SLC46A2Q9BY10 475 aa23.49■■□□□ 1.35
SRM-201ENST00000376957 B3GNT5Q9BYG0 378 aa23.49■■□□□ 1.35
SRM-201ENST00000376957 DMAP1Q9NPF5 467 aaPredicted RBP23.49■■□□□ 1.35
SRM-201ENST00000376957 RAPGEFL1Q9UHV5 662 aa23.49■■□□□ 1.35
SRM-201ENST00000376957 TRAV19A0A0A6YYK7 116 aa23.48■■□□□ 1.35
SRM-201ENST00000376957 KANSL1LA0AUZ9 987 aa23.48■■□□□ 1.35
SRM-201ENST00000376957 USP17L7P0C7H9 530 aa23.48■■□□□ 1.35
SRM-201ENST00000376957 CCDC192P0DO97 292 aa23.48■■□□□ 1.35
SRM-201ENST00000376957 GLULP15104 373 aa23.48■■□□□ 1.35
SRM-201ENST00000376957 CD44P16070 742 aaKnown RBP23.48■■□□□ 1.35
SRM-201ENST00000376957 NPR3P17342 541 aa23.48■■□□□ 1.35
SRM-201ENST00000376957 PFKLP17858 780 aa23.48■■□□□ 1.35
SRM-201ENST00000376957 INCA1Q0VD86 236 aa23.48■■□□□ 1.35
SRM-201ENST00000376957 CCDC142Q17RM4 750 aa23.48■■□□□ 1.35
SRM-201ENST00000376957 TTI2Q6NXR4 508 aa23.48■■□□□ 1.35
SRM-201ENST00000376957 CC2D1AQ6P1N0 951 aaPredicted RBP23.48■■□□□ 1.35
SRM-201ENST00000376957 NUP93Q8N1F7 819 aa23.48■■□□□ 1.35
SRM-201ENST00000376957 MSANTD3Q96H12 275 aa23.48■■□□□ 1.35
SRM-201ENST00000376957 IPO9Q96P70 1041 aaKnown RBP23.48■■□□□ 1.35
SRM-201ENST00000376957 ZNF518BQ9C0D4 1074 aa23.48■■□□□ 1.35
SRM-201ENST00000376957 SDCBP2Q9H190 292 aa23.48■■□□□ 1.35
SRM-201ENST00000376957 TRPC7Q9HCX4 862 aa23.48■■□□□ 1.35
SRM-201ENST00000376957 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.48■■□□□ 1.358e-10■■■■■ 41.5
SRM-201ENST00000376957 TDP1Q9NUW8 608 aa23.48■■□□□ 1.35
SRM-201ENST00000376957 CD58P19256 250 aa23.47■■□□□ 1.35
SRM-201ENST00000376957 BMP6P22004 513 aa23.47■■□□□ 1.35
SRM-201ENST00000376957 FCHO2Q0JRZ9 810 aa23.47■■□□□ 1.35
SRM-201ENST00000376957 CWF19L1Q69YN2 538 aaKnown RBP23.47■■□□□ 1.35
SRM-201ENST00000376957 TXNDC8Q6A555 127 aa23.47■■□□□ 1.35
SRM-201ENST00000376957 POTEHQ6S545 545 aa23.47■■□□□ 1.35
SRM-201ENST00000376957 FAM35AQ86V20 835 aa23.47■■□□□ 1.35
SRM-201ENST00000376957 TMEM105Q8N8V8 129 aa23.47■■□□□ 1.35
SRM-201ENST00000376957 MLKLQ8NB16 471 aa23.47■■□□□ 1.35
SRM-201ENST00000376957 PDZD8Q8NEN9 1154 aa23.47■■□□□ 1.35
SRM-201ENST00000376957 COMMD8Q9NX08 183 aa23.47■■□□□ 1.35
SRM-201ENST00000376957 DACH1Q9UI36 760 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms