RNA–Protein interactions for RNA: ENST00000376561.7

CTTN-203, Transcript of cortactin, humanhuman

TSL 1 (best) BASIC

Gene CTTN, Length 2,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-203ENST00000376561 C3orf58Q8NDZ4 430 aa18.62■□□□□ 0.57
CTTN-203ENST00000376561 PAAF1Q9BRP4 392 aa18.62■□□□□ 0.57
CTTN-203ENST00000376561 PCYOX1Q9UHG3 505 aa18.62■□□□□ 0.57
CTTN-203ENST00000376561 POMCP01189 267 aa18.62■□□□□ 0.57
CTTN-203ENST00000376561 RALAP11233 206 aa18.62■□□□□ 0.57
CTTN-203ENST00000376561 ADORA2BP29275 332 aa18.62■□□□□ 0.57
CTTN-203ENST00000376561 BCAT1P54687 386 aa18.62■□□□□ 0.57
CTTN-203ENST00000376561 BST2Q10589 180 aaKnown RBP18.62■□□□□ 0.57
CTTN-203ENST00000376561 UPP1Q16831 310 aa18.62■□□□□ 0.57
CTTN-203ENST00000376561 KCTD19Q17RG1 926 aaPredicted RBP18.62■□□□□ 0.57
CTTN-203ENST00000376561 TTC27Q6P3X3 843 aa18.62■□□□□ 0.57
CTTN-203ENST00000376561 CCDC137Q6PK04 289 aaKnown RBP18.62■□□□□ 0.57
CTTN-203ENST00000376561 ZNF598Q86UK7 904 aaKnown RBP18.62■□□□□ 0.57
CTTN-203ENST00000376561 KRT222Q8N1A0 295 aa18.62■□□□□ 0.57
CTTN-203ENST00000376561 C12orf50Q8NA57 414 aaPredicted RBP18.62■□□□□ 0.57
CTTN-203ENST00000376561 MAIP1Q8WWC4 291 aa18.62■□□□□ 0.57
CTTN-203ENST00000376561 PIWIL1Q96J94 861 aaKnown RBP18.62■□□□□ 0.57
CTTN-203ENST00000376561 UNC93B1Q9H1C4 597 aa18.62■□□□□ 0.57
CTTN-203ENST00000376561 UTP11Q9Y3A2 253 aaKnown RBP18.62■□□□□ 0.57
CTTN-203ENST00000376561 LRCH4O75427 683 aa18.61■□□□□ 0.57
CTTN-203ENST00000376561 TXNRD3NBQ6F5E7 133 aa18.61■□□□□ 0.57
CTTN-203ENST00000376561 RCOR2Q8IZ40 523 aa18.61■□□□□ 0.57
CTTN-203ENST00000376561 ARFGAP1Q8N6T3 406 aa18.61■□□□□ 0.57
CTTN-203ENST00000376561 EIF1ADQ8N9N8 165 aaKnown RBP18.61■□□□□ 0.57
CTTN-203ENST00000376561 SLC2A14Q8TDB8 520 aa18.61■□□□□ 0.57
CTTN-203ENST00000376561 SEC14L1Q92503 715 aa18.61■□□□□ 0.57
CTTN-203ENST00000376561 RNF25Q96BH1 459 aaPredicted RBP18.61■□□□□ 0.57
CTTN-203ENST00000376561 LRRC19Q9H756 370 aa18.61■□□□□ 0.57
CTTN-203ENST00000376561 RGS18Q9NS28 235 aa18.61■□□□□ 0.57
CTTN-203ENST00000376561 KLHL11Q9NVR0 708 aa18.61■□□□□ 0.57
CTTN-203ENST00000376561 FAM187AA6NFU0 413 aa18.61■□□□□ 0.57
CTTN-203ENST00000376561 GABBR2O75899 941 aa18.61■□□□□ 0.57
CTTN-203ENST00000376561 GRIK3Q13003 919 aa18.61■□□□□ 0.57
CTTN-203ENST00000376561 KLF1Q13351 362 aaPredicted RBP18.61■□□□□ 0.57
CTTN-203ENST00000376561 CUL1Q13616 776 aa18.61■□□□□ 0.57
CTTN-203ENST00000376561 SMC1AQ14683 1233 aaKnown RBP18.61■□□□□ 0.57
CTTN-203ENST00000376561 ZFYVE27Q5T4F4 411 aa18.61■□□□□ 0.57
CTTN-203ENST00000376561 OLFML1Q6UWY5 402 aa18.61■□□□□ 0.57
CTTN-203ENST00000376561 SND1Q7KZF4 910 aaKnown RBP eCLIP18.61■□□□□ 0.57
CTTN-203ENST00000376561 ANKS1BQ7Z6G8 1248 aa18.61■□□□□ 0.57
CTTN-203ENST00000376561 RTN4RL1Q86UN2 441 aaPredicted RBP18.61■□□□□ 0.57
CTTN-203ENST00000376561 RBM41Q96IZ5 413 aaKnown RBP18.61■□□□□ 0.57
CTTN-203ENST00000376561 TRIM51Q9BSJ1 452 aa18.61■□□□□ 0.57
CTTN-203ENST00000376561 OSBPL8Q9BZF1 889 aa18.61■□□□□ 0.57
CTTN-203ENST00000376561 INPP5FQ9Y2H2 1132 aa18.61■□□□□ 0.57
CTTN-203ENST00000376561 DNM1LO00429 736 aa18.6■□□□□ 0.57
CTTN-203ENST00000376561 ATP2C2O75185 946 aa18.6■□□□□ 0.57
CTTN-203ENST00000376561 ACAT1P24752 427 aaKnown RBP18.6■□□□□ 0.57
CTTN-203ENST00000376561 COILP38432 576 aaPredicted RBP18.6■□□□□ 0.57
CTTN-203ENST00000376561 PTGIRP43119 386 aa18.6■□□□□ 0.57
CTTN-203ENST00000376561 CDK7P50613 346 aa18.6■□□□□ 0.57
CTTN-203ENST00000376561 SNX16P57768 344 aa18.6■□□□□ 0.57
CTTN-203ENST00000376561 SLC25A11Q02978 314 aaKnown RBP18.6■□□□□ 0.57
CTTN-203ENST00000376561 ACAP1Q15027 740 aa18.6■□□□□ 0.57
CTTN-203ENST00000376561 DSTYKQ6XUX3 929 aa18.6■□□□□ 0.57
CTTN-203ENST00000376561 POLNQ7Z5Q5 900 aa18.6■□□□□ 0.57
CTTN-203ENST00000376561 DDX42Q86XP3 938 aaKnown RBP eCLIP18.6■□□□□ 0.57
CTTN-203ENST00000376561 JAMLQ86YT9 394 aa18.6■□□□□ 0.57
CTTN-203ENST00000376561 TMEM86AQ8N2M4 240 aa18.6■□□□□ 0.57
CTTN-203ENST00000376561 CAVIN3Q969G5 261 aa18.6■□□□□ 0.57
CTTN-203ENST00000376561 HEMGNQ9BXL5 484 aa18.6■□□□□ 0.57
CTTN-203ENST00000376561 RAB17Q9H0T7 212 aa18.6■□□□□ 0.57
CTTN-203ENST00000376561 PI4K2BG5E9Z4 385 aa18.59■□□□□ 0.57
CTTN-203ENST00000376561 KRT1P04264 644 aa18.59■□□□□ 0.57
CTTN-203ENST00000376561 PTPN1P18031 435 aaKnown RBP18.59■□□□□ 0.57
CTTN-203ENST00000376561 TKTP29401 623 aaKnown RBP18.59■□□□□ 0.57
CTTN-203ENST00000376561 CETN2P41208 172 aa18.59■□□□□ 0.57
CTTN-203ENST00000376561 FNTAP49354 379 aa18.59■□□□□ 0.57
CTTN-203ENST00000376561 AARSP49588 968 aaKnown RBP eCLIP18.59■□□□□ 0.57
CTTN-203ENST00000376561 SCUBE3Q8IX30 993 aa18.59■□□□□ 0.57
CTTN-203ENST00000376561 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.59■□□□□ 0.577e-7■■■■■ 44.2
CTTN-203ENST00000376561 RUNDC3BQ96NL0 473 aa18.59■□□□□ 0.57
CTTN-203ENST00000376561 SLITRK1Q96PX8 696 aa18.59■□□□□ 0.57
CTTN-203ENST00000376561 HNRNPABQ99729 332 aaKnown RBP18.59■□□□□ 0.57
CTTN-203ENST00000376561 VIPAS39Q9H9C1 493 aa18.59■□□□□ 0.57
CTTN-203ENST00000376561 DDX43Q9NXZ2 648 aaKnown RBP18.59■□□□□ 0.57
CTTN-203ENST00000376561 DDX56Q9NY93 547 aaKnown RBP18.59■□□□□ 0.57
CTTN-203ENST00000376561 C2CD4BA6NLJ0 364 aa18.59■□□□□ 0.57
CTTN-203ENST00000376561 C9IYK1 514 aa18.59■□□□□ 0.57
CTTN-203ENST00000376561 PAPSS1O43252 624 aaPredicted RBP18.59■□□□□ 0.57
CTTN-203ENST00000376561 DAPK3O43293 454 aa18.59■□□□□ 0.57
CTTN-203ENST00000376561 GPD1P21695 349 aa18.59■□□□□ 0.57
CTTN-203ENST00000376561 ECHS1P30084 290 aa18.59■□□□□ 0.57
CTTN-203ENST00000376561 FLT3P36888 993 aa18.59■□□□□ 0.57
CTTN-203ENST00000376561 LHX1P48742 406 aa18.59■□□□□ 0.57
CTTN-203ENST00000376561 ZNF143P52747 638 aaPredicted RBP18.59■□□□□ 0.57
CTTN-203ENST00000376561 SLC6A3Q01959 620 aa18.59■□□□□ 0.57
CTTN-203ENST00000376561 HLTFQ14527 1009 aaKnown RBP eCLIP18.59■□□□□ 0.572e-7■■■□□ 14.7
CTTN-203ENST00000376561 HADHQ16836 314 aaKnown RBP18.59■□□□□ 0.57
CTTN-203ENST00000376561 TRNP1Q6NT89 227 aa18.59■□□□□ 0.57
CTTN-203ENST00000376561 SLC24A5Q71RS6 500 aa18.59■□□□□ 0.57
CTTN-203ENST00000376561 ZDHHC17Q8IUH5 632 aa18.59■□□□□ 0.57
CTTN-203ENST00000376561 C1orf54Q8WWF1 131 aa18.59■□□□□ 0.57
CTTN-203ENST00000376561 ERP44Q9BS26 406 aa18.59■□□□□ 0.57
CTTN-203ENST00000376561 PAK6Q9NQU5 681 aaPredicted RBP18.59■□□□□ 0.57
CTTN-203ENST00000376561 GRAP2O75791 330 aa18.58■□□□□ 0.57
CTTN-203ENST00000376561 RNF8O76064 485 aa18.58■□□□□ 0.57
CTTN-203ENST00000376561 MYCP01106 439 aaPredicted RBP18.58■□□□□ 0.57
CTTN-203ENST00000376561 FAM153BP0C7A2 387 aa18.58■□□□□ 0.57
CTTN-203ENST00000376561 IL1R2P27930 398 aa18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms