RNA–Protein interactions for RNA: ENST00000375669.7

TUBGCP3-202, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP3, Length 2,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-202ENST00000375669 TGDSO95455 350 aa18.8■□□□□ 0.6
TUBGCP3-202ENST00000375669 GPX6P59796 221 aa18.8■□□□□ 0.6
TUBGCP3-202ENST00000375669 NFX1Q12986 1120 aaKnown RBP18.8■□□□□ 0.6
TUBGCP3-202ENST00000375669 MAMLD1Q13495 774 aa18.8■□□□□ 0.6
TUBGCP3-202ENST00000375669 DLGAP5Q15398 846 aa18.8■□□□□ 0.6
TUBGCP3-202ENST00000375669 SEZ6Q53EL9 994 aa18.8■□□□□ 0.6
TUBGCP3-202ENST00000375669 ZNF394Q53GI3 561 aa18.8■□□□□ 0.6
TUBGCP3-202ENST00000375669 ANKRD22Q5VYY1 191 aa18.8■□□□□ 0.6
TUBGCP3-202ENST00000375669 TMEM270Q6UE05 265 aa18.8■□□□□ 0.6
TUBGCP3-202ENST00000375669 B3GNT6Q6ZMB0 384 aa18.8■□□□□ 0.6
TUBGCP3-202ENST00000375669 ULK2Q8IYT8 1036 aa18.8■□□□□ 0.6
TUBGCP3-202ENST00000375669 RBM15BQ8NDT2 890 aaKnown RBP18.8■□□□□ 0.6
TUBGCP3-202ENST00000375669 ZNF516Q92618 1163 aa18.8■□□□□ 0.6
TUBGCP3-202ENST00000375669 ABTB1Q969K4 478 aaPredicted RBP18.8■□□□□ 0.6
TUBGCP3-202ENST00000375669 TMEM8AQ9HCN3 771 aa18.8■□□□□ 0.6
TUBGCP3-202ENST00000375669 TBX20Q9UMR3 447 aa18.8■□□□□ 0.6
TUBGCP3-202ENST00000375669 HNRNPCP07910 306 aaKnown RBP eCLIP18.8■□□□□ 0.6
TUBGCP3-202ENST00000375669 SMTNL2Q2TAL5 461 aa18.8■□□□□ 0.6
TUBGCP3-202ENST00000375669 C1orf146Q5VVC0 180 aa18.8■□□□□ 0.6
TUBGCP3-202ENST00000375669 NLRX1Q86UT6 975 aa18.8■□□□□ 0.6
TUBGCP3-202ENST00000375669 RHOT1Q8IXI2 618 aa18.8■□□□□ 0.6
TUBGCP3-202ENST00000375669 VTI1AQ96AJ9 217 aa18.8■□□□□ 0.6
TUBGCP3-202ENST00000375669 NMUR2Q9GZQ4 415 aa18.8■□□□□ 0.6
TUBGCP3-202ENST00000375669 SLC7A8Q9UHI5 535 aa18.8■□□□□ 0.6
TUBGCP3-202ENST00000375669 PLA2G4CQ9UP65 541 aa18.8■□□□□ 0.6
TUBGCP3-202ENST00000375669 CLRN2A0PK11 232 aa18.79■□□□□ 0.6
TUBGCP3-202ENST00000375669 VILLO15195 856 aa18.79■□□□□ 0.6
TUBGCP3-202ENST00000375669 LIASO43766 372 aa18.79■□□□□ 0.6
TUBGCP3-202ENST00000375669 FKBP6O75344 327 aa18.79■□□□□ 0.6
TUBGCP3-202ENST00000375669 NPTX2P47972 431 aa18.79■□□□□ 0.6
TUBGCP3-202ENST00000375669 ACOT2P49753 483 aa18.79■□□□□ 0.6
TUBGCP3-202ENST00000375669 GDF10P55107 478 aa18.79■□□□□ 0.6
TUBGCP3-202ENST00000375669 ADARP55265 1226 aaKnown RBP18.79■□□□□ 0.6
TUBGCP3-202ENST00000375669 GTF2BQ00403 316 aa18.79■□□□□ 0.6
TUBGCP3-202ENST00000375669 SFT2D3Q587I9 215 aa18.79■□□□□ 0.6
TUBGCP3-202ENST00000375669 ADGRG6Q86SQ4 1221 aa18.79■□□□□ 0.6
TUBGCP3-202ENST00000375669 THTPAQ9BU02 230 aa18.79■□□□□ 0.6
TUBGCP3-202ENST00000375669 DNAJC5Q9H3Z4 198 aa18.79■□□□□ 0.6
TUBGCP3-202ENST00000375669 PPCSQ9HAB8 311 aa18.79■□□□□ 0.6
TUBGCP3-202ENST00000375669 KCND2Q9NZV8 630 aa18.79■□□□□ 0.6
TUBGCP3-202ENST00000375669 ZNFX1Q9P2E3 1918 aaKnown RBP18.79■□□□□ 0.6
TUBGCP3-202ENST00000375669 DNALI1O14645 258 aaPredicted RBP18.79■□□□□ 0.6
TUBGCP3-202ENST00000375669 P4HBP07237 508 aaKnown RBP18.79■□□□□ 0.6
TUBGCP3-202ENST00000375669 MYL2P10916 166 aa18.79■□□□□ 0.6
TUBGCP3-202ENST00000375669 GPC3P51654 580 aa18.79■□□□□ 0.6
TUBGCP3-202ENST00000375669 MTMR2Q13614 643 aa18.79■□□□□ 0.6
TUBGCP3-202ENST00000375669 ALCAMQ13740 583 aa18.79■□□□□ 0.6
TUBGCP3-202ENST00000375669 KCNT1Q5JUK3 1230 aa18.79■□□□□ 0.6
TUBGCP3-202ENST00000375669 FNBP1LQ5T0N5 605 aa18.79■□□□□ 0.6
TUBGCP3-202ENST00000375669 RNF168Q8IYW5 571 aaPredicted RBP18.79■□□□□ 0.6
TUBGCP3-202ENST00000375669 TTC17Q96AE7 1141 aa18.79■□□□□ 0.6
TUBGCP3-202ENST00000375669 MXRA8Q9BRK3 442 aa18.79■□□□□ 0.6
TUBGCP3-202ENST00000375669 COL24A1Q17RW2 1714 aa18.79■□□□□ 0.6
TUBGCP3-202ENST00000375669 KAT6AQ92794 2004 aa18.78■□□□□ 0.6
TUBGCP3-202ENST00000375669 NRAPQ86VF7 1730 aa18.78■□□□□ 0.6
TUBGCP3-202ENST00000375669 TCRBV7S3A2A0A539 114 aa18.78■□□□□ 0.6
TUBGCP3-202ENST00000375669 HNRNPDLO14979 420 aaKnown RBP18.78■□□□□ 0.6
TUBGCP3-202ENST00000375669 TM9SF1O15321 606 aa18.78■□□□□ 0.6
TUBGCP3-202ENST00000375669 ENO1P06733 434 aaKnown RBP18.78■□□□□ 0.6
TUBGCP3-202ENST00000375669 VCLP18206 1134 aa18.78■□□□□ 0.6
TUBGCP3-202ENST00000375669 TNNI1P19237 187 aa18.78■□□□□ 0.6
TUBGCP3-202ENST00000375669 EIF2AK2P19525 551 aaKnown RBP18.78■□□□□ 0.6
TUBGCP3-202ENST00000375669 GEMIN4P57678 1058 aaKnown RBP18.78■□□□□ 0.6
TUBGCP3-202ENST00000375669 CBX3Q13185 183 aa18.78■□□□□ 0.6
TUBGCP3-202ENST00000375669 LRRC36Q1X8D7 754 aa18.78■□□□□ 0.6
TUBGCP3-202ENST00000375669 DUS1LQ6P1R4 473 aaKnown RBP18.78■□□□□ 0.6
TUBGCP3-202ENST00000375669 B3GNT9Q6UX72 402 aa18.78■□□□□ 0.6
TUBGCP3-202ENST00000375669 C3orf62Q6ZUJ4 267 aa18.78■□□□□ 0.6
TUBGCP3-202ENST00000375669 ZNF554Q86TJ5 538 aa18.78■□□□□ 0.6
TUBGCP3-202ENST00000375669 LDHDQ86WU2 507 aa18.78■□□□□ 0.6
TUBGCP3-202ENST00000375669 FAM172AQ8WUF8 416 aa18.78■□□□□ 0.6
TUBGCP3-202ENST00000375669 MTBPQ96DY7 904 aa18.78■□□□□ 0.6
TUBGCP3-202ENST00000375669 ZDHHC15Q96MV8 337 aa18.78■□□□□ 0.6
TUBGCP3-202ENST00000375669 ZNF395Q9H8N7 513 aaPredicted RBP18.78■□□□□ 0.6
TUBGCP3-202ENST00000375669 DHX15O43143 795 aaKnown RBP18.78■□□□□ 0.6
TUBGCP3-202ENST00000375669 PGM3O95394 542 aa18.78■□□□□ 0.6
TUBGCP3-202ENST00000375669 KRT1P04264 644 aa18.78■□□□□ 0.6
TUBGCP3-202ENST00000375669 MYCLP12524 364 aaPredicted RBP18.78■□□□□ 0.6
TUBGCP3-202ENST00000375669 ALDH1B1P30837 517 aa18.78■□□□□ 0.6
TUBGCP3-202ENST00000375669 SLC1A1P43005 524 aa18.78■□□□□ 0.6
TUBGCP3-202ENST00000375669 QARSP47897 775 aaKnown RBP18.78■□□□□ 0.6
TUBGCP3-202ENST00000375669 MSLNQ13421 630 aaPredicted RBP18.78■□□□□ 0.6
TUBGCP3-202ENST00000375669 RBM44Q6ZP01 1051 aaKnown RBP18.78■□□□□ 0.6
TUBGCP3-202ENST00000375669 RHPN2Q8IUC4 686 aa18.78■□□□□ 0.6
TUBGCP3-202ENST00000375669 ZBTB8BQ8NAP8 495 aaPredicted RBP18.78■□□□□ 0.6
TUBGCP3-202ENST00000375669 CYLC2Q14093 348 aaPredicted RBP18.77■□□□□ 0.6
TUBGCP3-202ENST00000375669 MON1BQ7L1V2 547 aa18.77■□□□□ 0.6
TUBGCP3-202ENST00000375669 ALYREFQ86V81 257 aaKnown RBP18.77■□□□□ 0.6
TUBGCP3-202ENST00000375669 SLC25A41Q8N5S1 370 aa18.77■□□□□ 0.6
TUBGCP3-202ENST00000375669 TMEM161BQ8NDZ6 487 aa18.77■□□□□ 0.6
TUBGCP3-202ENST00000375669 SHKBP1Q8TBC3 707 aa18.77■□□□□ 0.6
TUBGCP3-202ENST00000375669 PIP4K2CQ8TBX8 421 aa18.77■□□□□ 0.6
TUBGCP3-202ENST00000375669 PRICKLE1Q96MT3 831 aaPredicted RBP18.77■□□□□ 0.6
TUBGCP3-202ENST00000375669 C1orf112Q9NSG2 853 aa18.77■□□□□ 0.6
TUBGCP3-202ENST00000375669 CLUHO75153 1309 aa18.77■□□□□ 0.6
TUBGCP3-202ENST00000375669 TMEM221A6NGB7 291 aa18.77■□□□□ 0.59
TUBGCP3-202ENST00000375669 CAPN14A8MX76 684 aa18.77■□□□□ 0.59
TUBGCP3-202ENST00000375669 GLRA2P23416 452 aa18.77■□□□□ 0.59
TUBGCP3-202ENST00000375669 CHN2P52757 468 aa18.77■□□□□ 0.59
TUBGCP3-202ENST00000375669 TMED1Q13445 227 aa18.77■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms