RNA–Protein interactions for RNA: ENST00000375441.7

CUL4A-203, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 4,037 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-203ENST00000375441 ARMCX1Q9P291 453 aa13.74□□□□□ -0.21
CUL4A-203ENST00000375441 ZNRF3Q9ULT6 936 aa13.74□□□□□ -0.21
CUL4A-203ENST00000375441 TM9SF1O15321 606 aa13.74□□□□□ -0.21
CUL4A-203ENST00000375441 SUPT20HL2P0C7V6 817 aa13.74□□□□□ -0.21
CUL4A-203ENST00000375441 GCLCP48506 637 aaPredicted RBP13.74□□□□□ -0.21
CUL4A-203ENST00000375441 SUPT20HL1Q3ZLR7 823 aa13.74□□□□□ -0.21
CUL4A-203ENST00000375441 SPDYE2Q495Y8 402 aa13.74□□□□□ -0.21
CUL4A-203ENST00000375441 MROH9Q5TGP6 573 aa13.74□□□□□ -0.21
CUL4A-203ENST00000375441 NXNQ6DKJ4 435 aa13.74□□□□□ -0.21
CUL4A-203ENST00000375441 FAM228AQ86W67 206 aa13.74□□□□□ -0.21
CUL4A-203ENST00000375441 FAM13CQ8NE31 585 aa13.74□□□□□ -0.21
CUL4A-203ENST00000375441 TTC8Q8TAM2 541 aa13.74□□□□□ -0.21
CUL4A-203ENST00000375441 COL4A1P02462 1669 aa13.74□□□□□ -0.21
CUL4A-203ENST00000375441 STX3Q13277 289 aa13.74□□□□□ -0.21
CUL4A-203ENST00000375441 SNX30Q5VWJ9 437 aa13.74□□□□□ -0.21
CUL4A-203ENST00000375441 GADL1Q6ZQY3 521 aa13.74□□□□□ -0.21
CUL4A-203ENST00000375441 MON1BQ7L1V2 547 aa13.74□□□□□ -0.21
CUL4A-203ENST00000375441 PHF13Q86YI8 300 aaPredicted RBP13.74□□□□□ -0.21
CUL4A-203ENST00000375441 SLCO2A1Q92959 643 aa13.74□□□□□ -0.21
CUL4A-203ENST00000375441 APOL6Q9BWW8 343 aa13.74□□□□□ -0.21
CUL4A-203ENST00000375441 C12orf65Q9H3J6 166 aaKnown RBP13.74□□□□□ -0.21
CUL4A-203ENST00000375441 AAASQ9NRG9 546 aa13.74□□□□□ -0.21
CUL4A-203ENST00000375441 TTLL3Q9Y4R7 772 aa13.74□□□□□ -0.21
CUL4A-203ENST00000375441 ALOX15BO15296 676 aa13.74□□□□□ -0.21
CUL4A-203ENST00000375441 LSM8O95777 96 aaKnown RBP13.74□□□□□ -0.21
CUL4A-203ENST00000375441 EFTUD2Q15029 972 aaKnown RBP eCLIP13.74□□□□□ -0.212e-7■■■■■ 28.3
CUL4A-203ENST00000375441 GRAMD1BQ3KR37 738 aa13.74□□□□□ -0.21
CUL4A-203ENST00000375441 SLC30A9Q6PML9 568 aa13.74□□□□□ -0.21
CUL4A-203ENST00000375441 RGS9BPQ6ZS82 235 aa13.74□□□□□ -0.21
CUL4A-203ENST00000375441 SLC26A7Q8TE54 656 aa13.74□□□□□ -0.21
CUL4A-203ENST00000375441 MTBPQ96DY7 904 aa13.74□□□□□ -0.21
CUL4A-203ENST00000375441 BTBD10Q9BSF8 475 aa13.74□□□□□ -0.21
CUL4A-203ENST00000375441 SLC38A10Q9HBR0 1119 aa13.74□□□□□ -0.21
CUL4A-203ENST00000375441 HOXC10Q9NYD6 342 aa13.74□□□□□ -0.21
CUL4A-203ENST00000375441 DRG1Q9Y295 367 aaKnown RBP13.74□□□□□ -0.21
CUL4A-203ENST00000375441 APOL1O14791 398 aa13.73□□□□□ -0.21
CUL4A-203ENST00000375441 GLRA2P23416 452 aa13.73□□□□□ -0.21
CUL4A-203ENST00000375441 STIP1P31948 543 aaKnown RBP13.73□□□□□ -0.21
CUL4A-203ENST00000375441 GARSP41250 739 aaKnown RBP13.73□□□□□ -0.21
CUL4A-203ENST00000375441 FAAP100Q0VG06 881 aa13.73□□□□□ -0.21
CUL4A-203ENST00000375441 RASA2Q15283 850 aa13.73□□□□□ -0.21
CUL4A-203ENST00000375441 TTC39BQ5VTQ0 682 aaPredicted RBP13.73□□□□□ -0.21
CUL4A-203ENST00000375441 PRPF39Q86UA1 669 aaKnown RBP13.73□□□□□ -0.21
CUL4A-203ENST00000375441 DDX60Q8IY21 1712 aaKnown RBP13.73□□□□□ -0.21
CUL4A-203ENST00000375441 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.73□□□□□ -0.21
CUL4A-203ENST00000375441 PRPF31Q8WWY3 499 aaKnown RBP13.73□□□□□ -0.21
CUL4A-203ENST00000375441 VPS11Q9H270 941 aa13.73□□□□□ -0.21
CUL4A-203ENST00000375441 DHX35Q9H5Z1 703 aaKnown RBP13.73□□□□□ -0.21
CUL4A-203ENST00000375441 PAK5Q9P286 719 aa13.73□□□□□ -0.21
CUL4A-203ENST00000375441 SMAPO00193 183 aa13.73□□□□□ -0.21
CUL4A-203ENST00000375441 RFC1P35251 1148 aaPredicted RBP13.73□□□□□ -0.21
CUL4A-203ENST00000375441 ARL4AP40617 200 aa13.73□□□□□ -0.21
CUL4A-203ENST00000375441 RAP1GAPP47736 663 aa13.73□□□□□ -0.21
CUL4A-203ENST00000375441 C1orf220Q5T0J3 134 aa13.73□□□□□ -0.21
CUL4A-203ENST00000375441 TEKT4Q8WW24 435 aa13.73□□□□□ -0.21
CUL4A-203ENST00000375441 ZNF518BQ9C0D4 1074 aa13.73□□□□□ -0.21
CUL4A-203ENST00000375441 CHKBQ9Y259 395 aa13.73□□□□□ -0.21
CUL4A-203ENST00000375441 MYPNQ86TC9 1320 aa13.73□□□□□ -0.21
CUL4A-203ENST00000375441 KBTBD13C9JR72 458 aa13.73□□□□□ -0.21
CUL4A-203ENST00000375441 UBTFL6P0CB48 400 aaPredicted RBP13.73□□□□□ -0.21
CUL4A-203ENST00000375441 CETPP11597 493 aa13.73□□□□□ -0.21
CUL4A-203ENST00000375441 PTDSS1P48651 473 aaKnown RBP13.73□□□□□ -0.21
CUL4A-203ENST00000375441 BMPR2Q13873 1038 aa13.73□□□□□ -0.21
CUL4A-203ENST00000375441 PLEKHA7Q6IQ23 1121 aa13.73□□□□□ -0.21
CUL4A-203ENST00000375441 VSIG10LQ86VR7 867 aa13.73□□□□□ -0.21
CUL4A-203ENST00000375441 ZBTB10Q96DT7 871 aa13.73□□□□□ -0.21
CUL4A-203ENST00000375441 LRMDAQ9H2I8 198 aa13.73□□□□□ -0.21
CUL4A-203ENST00000375441 MYH1P12882 1939 aa13.72□□□□□ -0.21
CUL4A-203ENST00000375441 hCG_1818297A0A087WSY0 165 aa13.72□□□□□ -0.21
CUL4A-203ENST00000375441 FCHO1O14526 889 aa13.72□□□□□ -0.21
CUL4A-203ENST00000375441 OGTO15294 1046 aa13.72□□□□□ -0.21
CUL4A-203ENST00000375441 SPAG6O75602 509 aa13.72□□□□□ -0.21
CUL4A-203ENST00000375441 RPL22P35268 128 aaKnown RBP13.72□□□□□ -0.21
CUL4A-203ENST00000375441 KPNB1Q14974 876 aaKnown RBP13.72□□□□□ -0.21
CUL4A-203ENST00000375441 PARP6Q2NL67 630 aa13.72□□□□□ -0.21
CUL4A-203ENST00000375441 DALRD3Q5D0E6 543 aaKnown RBP13.72□□□□□ -0.21
CUL4A-203ENST00000375441 DNAAF3Q8N9W5 541 aa13.72□□□□□ -0.21
CUL4A-203ENST00000375441 FAM167AQ96KS9 214 aa13.72□□□□□ -0.21
CUL4A-203ENST00000375441 SAR1AQ9NR31 198 aa13.72□□□□□ -0.21
CUL4A-203ENST00000375441 UMODL1Q5DID0 1318 aa13.72□□□□□ -0.21
CUL4A-203ENST00000375441 DHX15O43143 795 aaKnown RBP13.72□□□□□ -0.21
CUL4A-203ENST00000375441 ASMTLO95671 621 aa13.72□□□□□ -0.21
CUL4A-203ENST00000375441 CFHP08603 1231 aa13.72□□□□□ -0.21
CUL4A-203ENST00000375441 SERPINB4P48594 390 aa13.72□□□□□ -0.21
CUL4A-203ENST00000375441 SIX1Q15475 284 aaPredicted RBP13.72□□□□□ -0.21
CUL4A-203ENST00000375441 MAP3K21Q5TCX8 1036 aa13.72□□□□□ -0.21
CUL4A-203ENST00000375441 ZNF280CQ8ND82 737 aa13.72□□□□□ -0.21
CUL4A-203ENST00000375441 FGD4Q96M96 766 aa13.72□□□□□ -0.21
CUL4A-203ENST00000375441 C2orf40Q9H1Z8 148 aa13.72□□□□□ -0.21
CUL4A-203ENST00000375441 PIM2Q9P1W9 311 aa13.72□□□□□ -0.21
CUL4A-203ENST00000375441 SLC17A7Q9P2U7 560 aa13.72□□□□□ -0.21
CUL4A-203ENST00000375441 MYH4Q9Y623 1939 aa13.72□□□□□ -0.21
CUL4A-203ENST00000375441 TMEM191CA6NGB0 347 aa13.72□□□□□ -0.21
CUL4A-203ENST00000375441 SESN2P58004 480 aaPredicted RBP13.72□□□□□ -0.21
CUL4A-203ENST00000375441 ACVR2BQ13705 512 aa13.72□□□□□ -0.21
CUL4A-203ENST00000375441 HIC1Q14526 733 aa13.72□□□□□ -0.21
CUL4A-203ENST00000375441 KBTBD12Q3ZCT8 623 aa13.72□□□□□ -0.21
CUL4A-203ENST00000375441 FAM47CQ5HY64 1035 aa13.72□□□□□ -0.21
CUL4A-203ENST00000375441 SESTD1Q86VW0 696 aa13.72□□□□□ -0.21
CUL4A-203ENST00000375441 GLIS1Q8NBF1 620 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms