RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 FAM102AQ5T9C2 384 aaPredicted RBP18.95■□□□□ 0.62
HLA-DQB1-201ENST00000374943 MAP3K21Q5TCX8 1036 aa18.95■□□□□ 0.62
HLA-DQB1-201ENST00000374943 DRICH1Q6PGQ1 229 aaPredicted RBP18.95■□□□□ 0.62
HLA-DQB1-201ENST00000374943 MFSD7Q6UXD7 560 aa18.95■□□□□ 0.62
HLA-DQB1-201ENST00000374943 ARFGAP1Q8N6T3 406 aa18.95■□□□□ 0.62
HLA-DQB1-201ENST00000374943 ATL2Q8NHH9 583 aa18.95■□□□□ 0.62
HLA-DQB1-201ENST00000374943 SLC35F5Q8WV83 523 aa18.95■□□□□ 0.62
HLA-DQB1-201ENST00000374943 EXOC4Q96A65 974 aa18.95■□□□□ 0.62
HLA-DQB1-201ENST00000374943 CAPNS2Q96L46 248 aa18.95■□□□□ 0.62
HLA-DQB1-201ENST00000374943 HEMGNQ9BXL5 484 aa18.95■□□□□ 0.62
HLA-DQB1-201ENST00000374943 RNF19AQ9NV58 838 aa18.95■□□□□ 0.62
HLA-DQB1-201ENST00000374943 SLC38A7Q9NVC3 462 aa18.95■□□□□ 0.62
HLA-DQB1-201ENST00000374943 HESX1Q9UBX0 185 aa18.95■□□□□ 0.62
HLA-DQB1-201ENST00000374943 ADAM21Q9UKJ8 722 aa18.95■□□□□ 0.62
HLA-DQB1-201ENST00000374943 GRIN2DO15399 1336 aa18.94■□□□□ 0.62
HLA-DQB1-201ENST00000374943 hCG_1818297A0A087WSY0 165 aa18.94■□□□□ 0.62
HLA-DQB1-201ENST00000374943 GAS8O95995 478 aa18.94■□□□□ 0.62
HLA-DQB1-201ENST00000374943 FGFR1P11362 822 aa18.94■□□□□ 0.62
HLA-DQB1-201ENST00000374943 WARSP23381 471 aaKnown RBP18.94■□□□□ 0.62
HLA-DQB1-201ENST00000374943 PCK1P35558 622 aa18.94■□□□□ 0.62
HLA-DQB1-201ENST00000374943 ZNF143P52747 638 aaPredicted RBP18.94■□□□□ 0.62
HLA-DQB1-201ENST00000374943 KRT17Q04695 432 aa18.94■□□□□ 0.62
HLA-DQB1-201ENST00000374943 LLGL1Q15334 1064 aa18.94■□□□□ 0.62
HLA-DQB1-201ENST00000374943 PPP1R7Q15435 360 aa18.94■□□□□ 0.62
HLA-DQB1-201ENST00000374943 TAZQ16635 292 aa18.94■□□□□ 0.62
HLA-DQB1-201ENST00000374943 TFDP3Q5H9I0 405 aa18.94■□□□□ 0.62
HLA-DQB1-201ENST00000374943 TXNRD3NBQ6F5E7 133 aa18.94■□□□□ 0.62
HLA-DQB1-201ENST00000374943 FAM183BPQ6ZVS7 135 aa18.94■□□□□ 0.62
HLA-DQB1-201ENST00000374943 TMEM110Q86TL2 294 aa18.94■□□□□ 0.62
HLA-DQB1-201ENST00000374943 EMC1Q8N766 993 aa18.94■□□□□ 0.62
HLA-DQB1-201ENST00000374943 APPL2Q8NEU8 664 aa18.94■□□□□ 0.62
HLA-DQB1-201ENST00000374943 ATG4AQ8WYN0 398 aa18.94■□□□□ 0.62
HLA-DQB1-201ENST00000374943 ART4Q93070 314 aa18.94■□□□□ 0.62
HLA-DQB1-201ENST00000374943 PKNOX2Q96KN3 472 aa18.94■□□□□ 0.62
HLA-DQB1-201ENST00000374943 TRAIPQ9BWF2 469 aa18.94■□□□□ 0.62
HLA-DQB1-201ENST00000374943 GOLGA2P5Q9HBQ8 144 aa18.94■□□□□ 0.62
HLA-DQB1-201ENST00000374943 CYLDQ9NQC7 956 aa18.94■□□□□ 0.62
HLA-DQB1-201ENST00000374943 KLHL11Q9NVR0 708 aa18.94■□□□□ 0.62
HLA-DQB1-201ENST00000374943 PSD3Q9NYI0 1048 aa18.94■□□□□ 0.62
HLA-DQB1-201ENST00000374943 WHRNQ9P202 907 aa18.94■□□□□ 0.62
HLA-DQB1-201ENST00000374943 SRRDQ9UH36 339 aa18.94■□□□□ 0.62
HLA-DQB1-201ENST00000374943 PTPN22Q9Y2R2 807 aa18.94■□□□□ 0.62
HLA-DQB1-201ENST00000374943 TSC2P49815 1807 aa18.94■□□□□ 0.62
HLA-DQB1-201ENST00000374943 C3orf70A6NLC5 250 aaPredicted RBP18.93■□□□□ 0.62
HLA-DQB1-201ENST00000374943 C2CD4BA6NLJ0 364 aa18.93■□□□□ 0.62
HLA-DQB1-201ENST00000374943 PI4K2BG5E9Z4 385 aa18.93■□□□□ 0.62
HLA-DQB1-201ENST00000374943 DPYSL4O14531 572 aa18.93■□□□□ 0.62
HLA-DQB1-201ENST00000374943 CABYRO75952 493 aa18.93■□□□□ 0.62
HLA-DQB1-201ENST00000374943 CTSHP09668 335 aa18.93■□□□□ 0.62
HLA-DQB1-201ENST00000374943 ELNP15502 786 aa18.93■□□□□ 0.62
HLA-DQB1-201ENST00000374943 GPD1P21695 349 aa18.93■□□□□ 0.62
HLA-DQB1-201ENST00000374943 GNL1P36915 607 aaPredicted RBP18.93■□□□□ 0.62
HLA-DQB1-201ENST00000374943 CDKN2BP42772 138 aa18.93■□□□□ 0.62
HLA-DQB1-201ENST00000374943 RPL34P49207 117 aaKnown RBP18.93■□□□□ 0.62
HLA-DQB1-201ENST00000374943 LILRA4P59901 499 aa18.93■□□□□ 0.62
HLA-DQB1-201ENST00000374943 GLIPR1L2Q4G1C9 344 aa18.93■□□□□ 0.62
HLA-DQB1-201ENST00000374943 MRPL10Q7Z7H8 261 aaKnown RBP18.93■□□□□ 0.62
HLA-DQB1-201ENST00000374943 ZDHHC17Q8IUH5 632 aa18.93■□□□□ 0.62
HLA-DQB1-201ENST00000374943 FBXO25Q8TCJ0 367 aa18.93■□□□□ 0.62
HLA-DQB1-201ENST00000374943 RAPGEF5Q92565 580 aa18.93■□□□□ 0.62
HLA-DQB1-201ENST00000374943 CNPY3Q9BT09 278 aa18.93■□□□□ 0.62
HLA-DQB1-201ENST00000374943 SNX25Q9H3E2 840 aa18.93■□□□□ 0.62
HLA-DQB1-201ENST00000374943 DPEP3Q9H4B8 488 aa18.93■□□□□ 0.62
HLA-DQB1-201ENST00000374943 FAM49BQ9NUQ9 324 aa18.93■□□□□ 0.62
HLA-DQB1-201ENST00000374943 ASNSD1Q9NWL6 643 aa18.93■□□□□ 0.62
HLA-DQB1-201ENST00000374943 WBP1LQ9NX94 342 aa18.93■□□□□ 0.62
HLA-DQB1-201ENST00000374943 MTRF1LQ9UGC7 380 aaKnown RBP18.93■□□□□ 0.62
HLA-DQB1-201ENST00000374943 PLAAQ9Y263 795 aa18.93■□□□□ 0.62
HLA-DQB1-201ENST00000374943 GIT1Q9Y2X7 761 aa18.93■□□□□ 0.62
HLA-DQB1-201ENST00000374943 NEU2Q9Y3R4 380 aa18.93■□□□□ 0.62
HLA-DQB1-201ENST00000374943 H0YGN5 161 aa18.92■□□□□ 0.62
HLA-DQB1-201ENST00000374943 HUS1O60921 280 aa18.92■□□□□ 0.62
HLA-DQB1-201ENST00000374943 HOXD10P28358 340 aa18.92■□□□□ 0.62
HLA-DQB1-201ENST00000374943 BCAT1P54687 386 aa18.92■□□□□ 0.62
HLA-DQB1-201ENST00000374943 PLTPP55058 493 aa18.92■□□□□ 0.62
HLA-DQB1-201ENST00000374943 DHX9Q08211 1270 aaKnown RBP18.92■□□□□ 0.62
HLA-DQB1-201ENST00000374943 BST2Q10589 180 aaKnown RBP18.92■□□□□ 0.62
HLA-DQB1-201ENST00000374943 SNX1Q13596 522 aa18.92■□□□□ 0.62
HLA-DQB1-201ENST00000374943 PTGISQ16647 500 aa18.92■□□□□ 0.62
HLA-DQB1-201ENST00000374943 KCTD19Q17RG1 926 aaPredicted RBP18.92■□□□□ 0.62
HLA-DQB1-201ENST00000374943 DEFB115Q30KQ5 88 aa18.92■□□□□ 0.62
HLA-DQB1-201ENST00000374943 ODF2Q5BJF6 829 aa18.92■□□□□ 0.62
HLA-DQB1-201ENST00000374943 OR6B2Q6IFH4 312 aa18.92■□□□□ 0.62
HLA-DQB1-201ENST00000374943 PMF1Q6P1K2 205 aa18.92■□□□□ 0.62
HLA-DQB1-201ENST00000374943 OLFML1Q6UWY5 402 aa18.92■□□□□ 0.62
HLA-DQB1-201ENST00000374943 ADGRF2Q8IZF7 708 aa18.92■□□□□ 0.62
HLA-DQB1-201ENST00000374943 ANKRD52Q8NB46 1076 aa18.92■□□□□ 0.62
HLA-DQB1-201ENST00000374943 GSTCDQ8NEC7 633 aa18.92■□□□□ 0.62
HLA-DQB1-201ENST00000374943 FAM204AQ9H8W3 233 aa18.92■□□□□ 0.62
HLA-DQB1-201ENST00000374943 NFS1Q9Y697 457 aa18.92■□□□□ 0.62
HLA-DQB1-201ENST00000374943 LRRD1A4D1F6 860 aa18.92■□□□□ 0.62
HLA-DQB1-201ENST00000374943 RNF8O76064 485 aa18.92■□□□□ 0.62
HLA-DQB1-201ENST00000374943 IL1R2P27930 398 aa18.92■□□□□ 0.62
HLA-DQB1-201ENST00000374943 SCNN1AP37088 669 aa18.92■□□□□ 0.62
HLA-DQB1-201ENST00000374943 RAB27AP51159 221 aa18.92■□□□□ 0.62
HLA-DQB1-201ENST00000374943 LMNB2Q03252 620 aa18.92■□□□□ 0.62
HLA-DQB1-201ENST00000374943 PTK7Q13308 1070 aa18.92■□□□□ 0.62
HLA-DQB1-201ENST00000374943 FAM26DQ5JW98 314 aa18.92■□□□□ 0.62
HLA-DQB1-201ENST00000374943 ZFYVE27Q5T4F4 411 aa18.92■□□□□ 0.62
HLA-DQB1-201ENST00000374943 ZBTB9Q96C00 473 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms