RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 ANXA8L1Q5VT79 327 aa8.31□□□□□ -1.08
USP48-203ENST00000374732 FOXR2Q6PJQ5 311 aa8.31□□□□□ -1.08
USP48-203ENST00000374732 LRIG3Q6UXM1 1119 aa8.31□□□□□ -1.08
USP48-203ENST00000374732 C4orf50Q6ZRC1 276 aa8.31□□□□□ -1.08
USP48-203ENST00000374732 RHOT2Q8IXI1 618 aa8.31□□□□□ -1.08
USP48-203ENST00000374732 ANKFN1Q8N957 763 aa8.31□□□□□ -1.08
USP48-203ENST00000374732 FANK1Q8TC84 345 aa8.31□□□□□ -1.08
USP48-203ENST00000374732 BCAS4Q8TDM0 211 aa8.31□□□□□ -1.08
USP48-203ENST00000374732 FAM89AQ96GI7 184 aa8.31□□□□□ -1.08
USP48-203ENST00000374732 TMX3Q96JJ7 454 aa8.31□□□□□ -1.08
USP48-203ENST00000374732 MLPHQ9BV36 600 aaPredicted RBP8.31□□□□□ -1.08
USP48-203ENST00000374732 RSAD1Q9HA92 442 aa8.31□□□□□ -1.08
USP48-203ENST00000374732 KLHL11Q9NVR0 708 aa8.31□□□□□ -1.08
USP48-203ENST00000374732 VPS28Q9UK41 221 aa8.31□□□□□ -1.08
USP48-203ENST00000374732 HIP1O00291 1037 aa8.3□□□□□ -1.08
USP48-203ENST00000374732 XPO1O14980 1071 aaKnown RBP8.3□□□□□ -1.08
USP48-203ENST00000374732 KLF4O43474 513 aa8.3□□□□□ -1.08
USP48-203ENST00000374732 ENDOD1O94919 500 aa8.3□□□□□ -1.08
USP48-203ENST00000374732 TRIM16O95361 564 aa8.3□□□□□ -1.08
USP48-203ENST00000374732 SNAP47Q5SQN1 464 aa8.3□□□□□ -1.08
USP48-203ENST00000374732 TYW1BQ6NUM6 668 aa8.3□□□□□ -1.08
USP48-203ENST00000374732 FAM122CQ6P4D5 195 aa8.3□□□□□ -1.08
USP48-203ENST00000374732 FAM133AQ8N9E0 248 aa8.3□□□□□ -1.08
USP48-203ENST00000374732 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.3□□□□□ -1.08
USP48-203ENST00000374732 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.3□□□□□ -1.08
USP48-203ENST00000374732 LPPQ93052 612 aa8.3□□□□□ -1.08
USP48-203ENST00000374732 TRIM43Q96BQ3 446 aaPredicted RBP8.3□□□□□ -1.08
USP48-203ENST00000374732 ANKRD36BP1Q96IX9 119 aa8.3□□□□□ -1.08
USP48-203ENST00000374732 NOX5Q96PH1 765 aa8.3□□□□□ -1.08
USP48-203ENST00000374732 MKNK1Q9BUB5 465 aa8.3□□□□□ -1.08
USP48-203ENST00000374732 PHAXQ9H814 394 aaKnown RBP8.3□□□□□ -1.08
USP48-203ENST00000374732 HYPKQ9NX55 129 aa8.3□□□□□ -1.08
USP48-203ENST00000374732 VPS18Q9P253 973 aa8.3□□□□□ -1.08
USP48-203ENST00000374732 ASIC3Q9UHC3 531 aa8.3□□□□□ -1.08
USP48-203ENST00000374732 GPC6Q9Y625 555 aaPredicted RBP8.3□□□□□ -1.08
USP48-203ENST00000374732 MRC1P22897 1456 aa8.3□□□□□ -1.08
USP48-203ENST00000374732 PKD1L3Q7Z443 1732 aa8.3□□□□□ -1.08
USP48-203ENST00000374732 ADCY9O60503 1353 aa8.3□□□□□ -1.08
USP48-203ENST00000374732 A0A087X0B3 334 aa8.3□□□□□ -1.08
USP48-203ENST00000374732 NDUFS6O75380 124 aaKnown RBP8.3□□□□□ -1.08
USP48-203ENST00000374732 GJB3O75712 270 aa8.3□□□□□ -1.08
USP48-203ENST00000374732 FSBPO95073 299 aa8.3□□□□□ -1.08
USP48-203ENST00000374732 EEF1GP26641 437 aaKnown RBP8.3□□□□□ -1.08
USP48-203ENST00000374732 GSDMDP57764 484 aa8.3□□□□□ -1.08
USP48-203ENST00000374732 GALNT3Q14435 633 aa8.3□□□□□ -1.08
USP48-203ENST00000374732 QPCTQ16769 361 aa8.3□□□□□ -1.08
USP48-203ENST00000374732 CTC1Q2NKJ3 1217 aa8.3□□□□□ -1.08
USP48-203ENST00000374732 TCTE1Q5JU00 501 aa8.3□□□□□ -1.08
USP48-203ENST00000374732 ZCCHC12Q6PEW1 402 aa8.3□□□□□ -1.08
USP48-203ENST00000374732 PLA2G4DQ86XP0 818 aa8.3□□□□□ -1.08
USP48-203ENST00000374732 ANKMY2Q8IV38 441 aa8.3□□□□□ -1.08
USP48-203ENST00000374732 APLFQ8IW19 511 aaPredicted RBP8.3□□□□□ -1.08
USP48-203ENST00000374732 CAMKK1Q8N5S9 505 aa8.3□□□□□ -1.08
USP48-203ENST00000374732 MFSD2AQ8NA29 543 aa8.3□□□□□ -1.08
USP48-203ENST00000374732 HCAR2Q8TDS4 363 aa8.3□□□□□ -1.08
USP48-203ENST00000374732 ANKRD27Q96NW4 1050 aa8.3□□□□□ -1.08
USP48-203ENST00000374732 PKP4Q99569 1192 aa8.3□□□□□ -1.08
USP48-203ENST00000374732 MFRPQ9BY79 579 aa8.3□□□□□ -1.08
USP48-203ENST00000374732 MYLK2Q9H1R3 596 aa8.3□□□□□ -1.08
USP48-203ENST00000374732 VPS16Q9H269 839 aa8.3□□□□□ -1.08
USP48-203ENST00000374732 SPACA1Q9HBV2 294 aa8.3□□□□□ -1.08
USP48-203ENST00000374732 ITM2CQ9NQX7 267 aa8.3□□□□□ -1.08
USP48-203ENST00000374732 CYP26B1Q9NR63 512 aa8.3□□□□□ -1.08
USP48-203ENST00000374732 ZFP57Q9NU63 452 aa8.3□□□□□ -1.08
USP48-203ENST00000374732 PCDHGA1Q9Y5H4 931 aa8.3□□□□□ -1.08
USP48-203ENST00000374732 UTYO14607 1347 aa8.3□□□□□ -1.08
USP48-203ENST00000374732 USP42Q9H9J4 1324 aaKnown RBP8.3□□□□□ -1.08
USP48-203ENST00000374732 PRR23AA6NEV1 266 aa8.29□□□□□ -1.08
USP48-203ENST00000374732 DCAF8L1A6NGE4 600 aa8.29□□□□□ -1.08
USP48-203ENST00000374732 H7C0S8 307 aa8.29□□□□□ -1.08
USP48-203ENST00000374732 LINC01387J3KSC0 135 aa8.29□□□□□ -1.08
USP48-203ENST00000374732 LILRB5O75023 590 aa8.29□□□□□ -1.08
USP48-203ENST00000374732 ZBTB48P10074 688 aaPredicted RBP8.29□□□□□ -1.08
USP48-203ENST00000374732 RPS6KB1P23443 525 aa8.29□□□□□ -1.08
USP48-203ENST00000374732 MYO1EQ12965 1108 aa8.29□□□□□ -1.08
USP48-203ENST00000374732 SLC39A14Q15043 492 aa8.29□□□□□ -1.08
USP48-203ENST00000374732 ZSCAN23Q3MJ62 389 aa8.29□□□□□ -1.08
USP48-203ENST00000374732 TTC23LQ6PF05 361 aa8.29□□□□□ -1.08
USP48-203ENST00000374732 RANBP10Q6VN20 620 aa8.29□□□□□ -1.08
USP48-203ENST00000374732 MPRIPQ6WCQ1 1025 aa8.29□□□□□ -1.08
USP48-203ENST00000374732 TXNRD3Q86VQ6 643 aa8.29□□□□□ -1.08
USP48-203ENST00000374732 KSR1Q8IVT5 923 aa8.29□□□□□ -1.08
USP48-203ENST00000374732 RILPL2Q969X0 211 aa8.29□□□□□ -1.08
USP48-203ENST00000374732 FBXL18Q96ME1 805 aa8.29□□□□□ -1.08
USP48-203ENST00000374732 DACH2Q96NX9 599 aa8.29□□□□□ -1.08
USP48-203ENST00000374732 UCK1Q9HA47 277 aa8.29□□□□□ -1.08
USP48-203ENST00000374732 PRDM5Q9NQX1 630 aaPredicted RBP8.29□□□□□ -1.08
USP48-203ENST00000374732 CPA4Q9UI42 421 aa8.29□□□□□ -1.08
USP48-203ENST00000374732 CPSF3Q9UKF6 684 aaKnown RBP8.29□□□□□ -1.08
USP48-203ENST00000374732 ZFP37Q9Y6Q3 630 aaPredicted RBP8.29□□□□□ -1.08
USP48-203ENST00000374732 FAM237AA0A1B0GTK4 181 aa8.29□□□□□ -1.08
USP48-203ENST00000374732 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.29□□□□□ -1.08
USP48-203ENST00000374732 ZBBXA8MT70 800 aa8.29□□□□□ -1.08
USP48-203ENST00000374732 B4E1Z4 1266 aa8.29□□□□□ -1.08
USP48-203ENST00000374732 F8W8V4 182 aa8.29□□□□□ -1.08
USP48-203ENST00000374732 H3BQV1 296 aa8.29□□□□□ -1.08
USP48-203ENST00000374732 PSMD11O00231 422 aa8.29□□□□□ -1.08
USP48-203ENST00000374732 SHOXO15266 292 aa8.29□□□□□ -1.08
USP48-203ENST00000374732 TLR5O60602 858 aa8.29□□□□□ -1.08
USP48-203ENST00000374732 FKBP9O95302 570 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms