RNA–Protein interactions for RNA: ENST00000374695.7

HSPG2-203, Transcript of heparan sulfate proteoglycan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HSPG2, Length 14,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-203ENST00000374695 IPPQ9Y573 584 aa8.68□□□□□ -1.02
HSPG2-203ENST00000374695 RNF17Q9BXT8 1623 aaKnown RBP8.68□□□□□ -1.02
HSPG2-203ENST00000374695 MEI4A8MW99 385 aa8.68□□□□□ -1.02
HSPG2-203ENST00000374695 C1orf50Q9BV19 199 aa8.68□□□□□ -1.02
HSPG2-203ENST00000374695 EFCAB1Q9HAE3 211 aa8.68□□□□□ -1.02
HSPG2-203ENST00000374695 DOLKQ9UPQ8 538 aa8.68□□□□□ -1.02
HSPG2-203ENST00000374695 TIMM44O43615 452 aa8.68□□□□□ -1.02
HSPG2-203ENST00000374695 EIF2AK2P19525 551 aaKnown RBP8.68□□□□□ -1.02
HSPG2-203ENST00000374695 EID3Q8N140 333 aa8.68□□□□□ -1.02
HSPG2-203ENST00000374695 HOXC10Q9NYD6 342 aa8.68□□□□□ -1.02
HSPG2-203ENST00000374695 A0A1B0GTH6 734 aa8.67□□□□□ -1.02
HSPG2-203ENST00000374695 TSC22D2O75157 780 aa8.67□□□□□ -1.02
HSPG2-203ENST00000374695 GRM4Q14833 912 aa8.67□□□□□ -1.02
HSPG2-203ENST00000374695 PIGOQ8TEQ8 1089 aa8.67□□□□□ -1.02
HSPG2-203ENST00000374695 NRKQ7Z2Y5 1582 aa8.67□□□□□ -1.02
HSPG2-203ENST00000374695 ARPC4P59998 168 aa8.67□□□□□ -1.02
HSPG2-203ENST00000374695 NCOA4Q13772 614 aa8.67□□□□□ -1.02
HSPG2-203ENST00000374695 PDIA5Q14554 519 aa8.67□□□□□ -1.02
HSPG2-203ENST00000374695 SF3B3Q15393 1217 aaKnown RBP8.67□□□□□ -1.02
HSPG2-203ENST00000374695 LRRC1Q9BTT6 524 aa8.67□□□□□ -1.02
HSPG2-203ENST00000374695 C6orf62Q9GZU0 229 aaPredicted RBP8.67□□□□□ -1.02
HSPG2-203ENST00000374695 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.67□□□□□ -1.02
HSPG2-203ENST00000374695 STK39Q9UEW8 545 aa8.67□□□□□ -1.02
HSPG2-203ENST00000374695 AP3M1Q9Y2T2 418 aa8.67□□□□□ -1.02
HSPG2-203ENST00000374695 SLC30A1Q9Y6M5 507 aa8.67□□□□□ -1.02
HSPG2-203ENST00000374695 A0A1W2PQJ5 194 aa8.67□□□□□ -1.02
HSPG2-203ENST00000374695 FAM220BPB1ANY3 271 aa8.67□□□□□ -1.02
HSPG2-203ENST00000374695 TULP2O00295 520 aa8.67□□□□□ -1.02
HSPG2-203ENST00000374695 PSMD14O00487 310 aa8.67□□□□□ -1.02
HSPG2-203ENST00000374695 VPS4BO75351 444 aa8.67□□□□□ -1.02
HSPG2-203ENST00000374695 SLC2A3P11169 496 aa8.67□□□□□ -1.02
HSPG2-203ENST00000374695 BCAP31P51572 246 aa8.67□□□□□ -1.02
HSPG2-203ENST00000374695 RPS7P62081 194 aaKnown RBP8.67□□□□□ -1.02
HSPG2-203ENST00000374695 ZNF394Q53GI3 561 aa8.67□□□□□ -1.02
HSPG2-203ENST00000374695 DDX53Q86TM3 631 aaKnown RBP8.67□□□□□ -1.02
HSPG2-203ENST00000374695 SLC22A9Q8IVM8 553 aa8.67□□□□□ -1.02
HSPG2-203ENST00000374695 ALG13Q9NP73 1137 aaKnown RBP8.67□□□□□ -1.02
HSPG2-203ENST00000374695 A2ML1A8K2U0 1454 aa8.67□□□□□ -1.02
HSPG2-203ENST00000374695 STK25O00506 426 aa8.67□□□□□ -1.02
HSPG2-203ENST00000374695 GLRA3O75311 464 aa8.67□□□□□ -1.02
HSPG2-203ENST00000374695 ITGA9Q13797 1035 aa8.67□□□□□ -1.02
HSPG2-203ENST00000374695 FBXO42Q6P3S6 717 aa8.67□□□□□ -1.02
HSPG2-203ENST00000374695 TRIM48Q8IWZ4 208 aa8.67□□□□□ -1.02
HSPG2-203ENST00000374695 C10orf53Q8N6V4 93 aa8.67□□□□□ -1.02
HSPG2-203ENST00000374695 TTC26A0AVF1 554 aa8.67□□□□□ -1.02
HSPG2-203ENST00000374695 TARSP26639 723 aaKnown RBP8.67□□□□□ -1.02
HSPG2-203ENST00000374695 FLT3P36888 993 aa8.67□□□□□ -1.02
HSPG2-203ENST00000374695 SESN2P58004 480 aaPredicted RBP8.67□□□□□ -1.02
HSPG2-203ENST00000374695 STX4Q12846 297 aa8.67□□□□□ -1.02
HSPG2-203ENST00000374695 WDR60Q8WVS4 1066 aa8.67□□□□□ -1.02
HSPG2-203ENST00000374695 FAM217BQ9NTX9 383 aaPredicted RBP8.67□□□□□ -1.02
HSPG2-203ENST00000374695 PDS5AQ29RF7 1337 aaKnown RBP8.67□□□□□ -1.02
HSPG2-203ENST00000374695 CD4P01730 458 aa8.67□□□□□ -1.02
HSPG2-203ENST00000374695 HSMCR30P0CW71 290 aa8.67□□□□□ -1.02
HSPG2-203ENST00000374695 KDM7AQ6ZMT4 941 aa8.67□□□□□ -1.02
HSPG2-203ENST00000374695 THNSL1Q8IYQ7 743 aa8.67□□□□□ -1.02
HSPG2-203ENST00000374695 POP5Q969H6 163 aaKnown RBP8.67□□□□□ -1.02
HSPG2-203ENST00000374695 ADI1Q9BV57 179 aa8.67□□□□□ -1.02
HSPG2-203ENST00000374695 YWHAZP63104 245 aaKnown RBP8.67□□□□□ -1.02
HSPG2-203ENST00000374695 UBE2SQ16763 222 aa8.67□□□□□ -1.02
HSPG2-203ENST00000374695 KIAA0408Q6ZU52 694 aa8.67□□□□□ -1.02
HSPG2-203ENST00000374695 WDR48Q8TAF3 677 aa8.67□□□□□ -1.02
HSPG2-203ENST00000374695 THUMPD3Q9BV44 507 aaKnown RBP8.67□□□□□ -1.02
HSPG2-203ENST00000374695 KLHL11Q9NVR0 708 aa8.67□□□□□ -1.02
HSPG2-203ENST00000374695 TLR7Q9NYK1 1049 aaKnown RBP8.67□□□□□ -1.02
HSPG2-203ENST00000374695 NUP214P35658 2090 aaPredicted RBP8.67□□□□□ -1.02
HSPG2-203ENST00000374695 UTYO14607 1347 aa8.67□□□□□ -1.02
HSPG2-203ENST00000374695 MAGEA4P43358 317 aa8.67□□□□□ -1.02
HSPG2-203ENST00000374695 KCTD14Q9BQ13 255 aaPredicted RBP8.67□□□□□ -1.02
HSPG2-203ENST00000374695 LIMA1Q9UHB6 759 aaKnown RBP8.67□□□□□ -1.02
HSPG2-203ENST00000374695 CHD1O14646 1710 aa8.67□□□□□ -1.02
HSPG2-203ENST00000374695 KIAA1210Q9ULL0 1709 aa8.67□□□□□ -1.02
HSPG2-203ENST00000374695 SDK1Q7Z5N4 2213 aa8.67□□□□□ -1.02
HSPG2-203ENST00000374695 NQO1P15559 274 aaKnown RBP8.67□□□□□ -1.02
HSPG2-203ENST00000374695 PHKG2P15735 406 aa8.67□□□□□ -1.02
HSPG2-203ENST00000374695 NAB2Q15742 525 aa8.67□□□□□ -1.02
HSPG2-203ENST00000374695 FAM98CQ17RN3 349 aaKnown RBP8.67□□□□□ -1.02
HSPG2-203ENST00000374695 LPCAT2Q7L5N7 544 aa8.67□□□□□ -1.02
HSPG2-203ENST00000374695 RASSF5Q8WWW0 418 aa8.67□□□□□ -1.02
HSPG2-203ENST00000374695 YIPF2Q9BWQ6 316 aa8.67□□□□□ -1.02
HSPG2-203ENST00000374695 RSL24D1Q9UHA3 163 aaKnown RBP8.67□□□□□ -1.02
HSPG2-203ENST00000374695 WDR37Q9Y2I8 494 aa8.67□□□□□ -1.02
HSPG2-203ENST00000374695 TRIM49BA6NDI0 452 aa8.67□□□□□ -1.02
HSPG2-203ENST00000374695 GRK3P35626 688 aa8.67□□□□□ -1.02
HSPG2-203ENST00000374695 FEN1P39748 380 aaKnown RBP8.67□□□□□ -1.02
HSPG2-203ENST00000374695 LONRF1Q17RB8 773 aa8.67□□□□□ -1.02
HSPG2-203ENST00000374695 FAM98BQ52LJ0 330 aaKnown RBP8.67□□□□□ -1.02
HSPG2-203ENST00000374695 ZNF746Q6NUN9 644 aaPredicted RBP8.67□□□□□ -1.02
HSPG2-203ENST00000374695 FMR1NBQ8N0W7 255 aaPredicted RBP8.67□□□□□ -1.02
HSPG2-203ENST00000374695 AP3S1Q92572 193 aa8.67□□□□□ -1.02
HSPG2-203ENST00000374695 MCEEQ96PE7 176 aa8.67□□□□□ -1.02
HSPG2-203ENST00000374695 USP21Q9UK80 565 aa8.67□□□□□ -1.02
HSPG2-203ENST00000374695 APOBEC3FQ8IUX4 373 aaKnown RBP8.67□□□□□ -1.02
HSPG2-203ENST00000374695 GLYCTKQ8IVS8 523 aa8.67□□□□□ -1.02
HSPG2-203ENST00000374695 COA1Q9GZY4 146 aa8.67□□□□□ -1.02
HSPG2-203ENST00000374695 CPSF1Q10570 1443 aaKnown RBP8.67□□□□□ -1.02
HSPG2-203ENST00000374695 EIF4E1BA6NMX2 242 aaKnown RBP8.66□□□□□ -1.02
HSPG2-203ENST00000374695 CD3EAPO15446 510 aaKnown RBP8.66□□□□□ -1.02
HSPG2-203ENST00000374695 CD2BP2O95400 341 aaKnown RBP8.66□□□□□ -1.02
HSPG2-203ENST00000374695 TCN1P20061 433 aaPredicted RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms