RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 SPRED3Q2MJR0 410 aa14.65□□□□□ -0.06
HMGCL-203ENST00000374490 ZNF667Q5HYK9 610 aa14.65□□□□□ -0.06
HMGCL-203ENST00000374490 BBS12Q6ZW61 710 aa14.65□□□□□ -0.06
HMGCL-203ENST00000374490 TGS1Q96RS0 853 aaKnown RBP14.65□□□□□ -0.06
HMGCL-203ENST00000374490 NFKBIZQ9BYH8 718 aa14.65□□□□□ -0.06
HMGCL-203ENST00000374490 BCO2Q9BYV7 579 aa14.65□□□□□ -0.06
HMGCL-203ENST00000374490 MIS12Q9H081 205 aa14.65□□□□□ -0.06
HMGCL-203ENST00000374490 SMARCAD1Q9H4L7 1026 aa14.65□□□□□ -0.06
HMGCL-203ENST00000374490 RPF1Q9H9Y2 349 aaKnown RBP14.65□□□□□ -0.06
HMGCL-203ENST00000374490 CYP3A43Q9HB55 503 aa14.65□□□□□ -0.06
HMGCL-203ENST00000374490 SSU72Q9NP77 194 aaKnown RBP14.65□□□□□ -0.06
HMGCL-203ENST00000374490 MORF4L1Q9UBU8 362 aa14.65□□□□□ -0.06
HMGCL-203ENST00000374490 TNFSF13BQ9Y275 285 aa14.65□□□□□ -0.06
HMGCL-203ENST00000374490 ASB14A6NK59 587 aa14.64□□□□□ -0.07
HMGCL-203ENST00000374490 SGK1O00141 431 aa14.64□□□□□ -0.07
HMGCL-203ENST00000374490 ATP2C2O75185 946 aa14.64□□□□□ -0.07
HMGCL-203ENST00000374490 KRT3P12035 628 aa14.64□□□□□ -0.07
HMGCL-203ENST00000374490 PECAM1P16284 738 aaPredicted RBP14.64□□□□□ -0.07
HMGCL-203ENST00000374490 ARL4CP56559 192 aa14.64□□□□□ -0.07
HMGCL-203ENST00000374490 POU5F1BQ06416 359 aa14.64□□□□□ -0.07
HMGCL-203ENST00000374490 TAZQ16635 292 aa14.64□□□□□ -0.07
HMGCL-203ENST00000374490 ATP13A4Q4VNC1 1196 aa14.64□□□□□ -0.07
HMGCL-203ENST00000374490 RNF43Q68DV7 783 aa14.64□□□□□ -0.07
HMGCL-203ENST00000374490 DENND1BQ6P3S1 775 aa14.64□□□□□ -0.07
HMGCL-203ENST00000374490 RGS9BPQ6ZS82 235 aa14.64□□□□□ -0.07
HMGCL-203ENST00000374490 EEPD1Q7L9B9 569 aa14.64□□□□□ -0.07
HMGCL-203ENST00000374490 TRABD2AQ86V40 505 aa14.64□□□□□ -0.07
HMGCL-203ENST00000374490 PPIL6Q8IXY8 311 aa14.64□□□□□ -0.07
HMGCL-203ENST00000374490 CYP4X1Q8N118 509 aa14.64□□□□□ -0.07
HMGCL-203ENST00000374490 TTC39CQ8N584 583 aa14.64□□□□□ -0.07
HMGCL-203ENST00000374490 WDTC1Q8N5D0 677 aa14.64□□□□□ -0.07
HMGCL-203ENST00000374490 TFAP2BQ92481 460 aa14.64□□□□□ -0.07
HMGCL-203ENST00000374490 PWWP2AQ96N64 755 aa14.64□□□□□ -0.07
HMGCL-203ENST00000374490 FAM118BQ9BPY3 351 aa14.64□□□□□ -0.07
HMGCL-203ENST00000374490 PLXNA1Q9UIW2 1896 aa14.64□□□□□ -0.07
HMGCL-203ENST00000374490 TTLL13PA6NNM8 815 aa14.63□□□□□ -0.07
HMGCL-203ENST00000374490 MAGEB2O15479 319 aa14.63□□□□□ -0.07
HMGCL-203ENST00000374490 MGRN1O60291 552 aa14.63□□□□□ -0.07
HMGCL-203ENST00000374490 MYCP01106 439 aaPredicted RBP14.63□□□□□ -0.07
HMGCL-203ENST00000374490 P4HA1P13674 534 aa14.63□□□□□ -0.07
HMGCL-203ENST00000374490 CD19P15391 556 aa14.63□□□□□ -0.07
HMGCL-203ENST00000374490 SLC8A1P32418 973 aa14.63□□□□□ -0.07
HMGCL-203ENST00000374490 PLCB3Q01970 1234 aa14.63□□□□□ -0.07
HMGCL-203ENST00000374490 SLC25A11Q02978 314 aaKnown RBP14.63□□□□□ -0.07
HMGCL-203ENST00000374490 CCDC15Q0P6D6 951 aa14.63□□□□□ -0.07
HMGCL-203ENST00000374490 MTFR1Q15390 333 aa14.63□□□□□ -0.07
HMGCL-203ENST00000374490 FAM187BQ17R55 369 aa14.63□□□□□ -0.07
HMGCL-203ENST00000374490 LY6KQ17RY6 165 aa14.63□□□□□ -0.07
HMGCL-203ENST00000374490 SCARA5Q6ZMJ2 495 aa14.63□□□□□ -0.07
HMGCL-203ENST00000374490 PRCCQ92733 491 aaPredicted RBP14.63□□□□□ -0.07
HMGCL-203ENST00000374490 FGD4Q96M96 766 aa14.63□□□□□ -0.07
HMGCL-203ENST00000374490 TACO1Q9BSH4 297 aaKnown RBP14.63□□□□□ -0.07
HMGCL-203ENST00000374490 VPS37BQ9H9H4 285 aa14.63□□□□□ -0.07
HMGCL-203ENST00000374490 PRMT7Q9NVM4 692 aaPredicted RBP14.63□□□□□ -0.07
HMGCL-203ENST00000374490 MCM3APO60318 1980 aa14.63□□□□□ -0.07
HMGCL-203ENST00000374490 A0A1B0GUA9 196 aa14.63□□□□□ -0.07
HMGCL-203ENST00000374490 C3orf70A6NLC5 250 aaPredicted RBP14.63□□□□□ -0.07
HMGCL-203ENST00000374490 ZBTB42B2RXF5 422 aa14.63□□□□□ -0.07
HMGCL-203ENST00000374490 STRNO43815 780 aa14.63□□□□□ -0.07
HMGCL-203ENST00000374490 MCF2P10911 925 aa14.63□□□□□ -0.07
HMGCL-203ENST00000374490 TCF4P15884 667 aa14.63□□□□□ -0.07
HMGCL-203ENST00000374490 CREB1P16220 341 aa14.63□□□□□ -0.07
HMGCL-203ENST00000374490 PHKA2P46019 1235 aa14.63□□□□□ -0.07
HMGCL-203ENST00000374490 PSMC1P62191 440 aaKnown RBP14.63□□□□□ -0.07
HMGCL-203ENST00000374490 RIPK1Q13546 671 aa14.63□□□□□ -0.07
HMGCL-203ENST00000374490 SPARCL1Q14515 664 aa14.63□□□□□ -0.07
HMGCL-203ENST00000374490 GALNTL6Q49A17 601 aa14.63□□□□□ -0.07
HMGCL-203ENST00000374490 PTPN20Q4JDL3 420 aa14.63□□□□□ -0.07
HMGCL-203ENST00000374490 ZNF394Q53GI3 561 aa14.63□□□□□ -0.07
HMGCL-203ENST00000374490 CYP4A22Q5TCH4 519 aa14.63□□□□□ -0.07
HMGCL-203ENST00000374490 RHPN2Q8IUC4 686 aa14.63□□□□□ -0.07
HMGCL-203ENST00000374490 DHX37Q8IY37 1157 aaKnown RBP14.63□□□□□ -0.07
HMGCL-203ENST00000374490 LRRC71Q8N4P6 559 aa14.63□□□□□ -0.07
HMGCL-203ENST00000374490 ATP11CQ8NB49 1132 aa14.63□□□□□ -0.07
HMGCL-203ENST00000374490 GDAP1Q8TB36 358 aa14.63□□□□□ -0.07
HMGCL-203ENST00000374490 SH3TC2Q8TF17 1288 aa14.63□□□□□ -0.07
HMGCL-203ENST00000374490 SMC6Q96SB8 1091 aa14.63□□□□□ -0.07
HMGCL-203ENST00000374490 ARHGAP39Q9C0H5 1083 aa14.63□□□□□ -0.07
HMGCL-203ENST00000374490 CDT1Q9H211 546 aa14.63□□□□□ -0.07
HMGCL-203ENST00000374490 TRABDQ9H4I3 376 aa14.63□□□□□ -0.07
HMGCL-203ENST00000374490 SYNCQ9H7C4 482 aa14.63□□□□□ -0.07
HMGCL-203ENST00000374490 VRTNQ9H8Y1 702 aa14.63□□□□□ -0.07
HMGCL-203ENST00000374490 KLHL14Q9P2G3 628 aa14.63□□□□□ -0.07
HMGCL-203ENST00000374490 PSMC3IPQ9P2W1 217 aaPredicted RBP14.63□□□□□ -0.07
HMGCL-203ENST00000374490 PRKAG3Q9UGI9 489 aa14.63□□□□□ -0.07
HMGCL-203ENST00000374490 TBK1Q9UHD2 729 aa14.63□□□□□ -0.07
HMGCL-203ENST00000374490 FARP1Q9Y4F1 1045 aaPredicted RBP14.63□□□□□ -0.07
HMGCL-203ENST00000374490 GOLGA8SH3BPF8 625 aa14.62□□□□□ -0.07
HMGCL-203ENST00000374490 INO80B-WBP1J3KQ70 363 aa14.62□□□□□ -0.07
HMGCL-203ENST00000374490 ZSCAN5DPP0CG00 497 aa14.62□□□□□ -0.07
HMGCL-203ENST00000374490 KDELR1P24390 212 aa14.62□□□□□ -0.07
HMGCL-203ENST00000374490 MARK3P27448 753 aa14.62□□□□□ -0.07
HMGCL-203ENST00000374490 HOXD10P28358 340 aa14.62□□□□□ -0.07
HMGCL-203ENST00000374490 ADORA2AP29274 412 aa14.62□□□□□ -0.07
HMGCL-203ENST00000374490 SKIV2L2P42285 1042 aaKnown RBP14.62□□□□□ -0.07
HMGCL-203ENST00000374490 GABRB2P47870 512 aa14.62□□□□□ -0.07
HMGCL-203ENST00000374490 ELF3P78545 371 aaPredicted RBP14.62□□□□□ -0.07
HMGCL-203ENST00000374490 MPP2Q14168 576 aa14.62□□□□□ -0.07
HMGCL-203ENST00000374490 HIF1AQ16665 826 aa14.62□□□□□ -0.07
HMGCL-203ENST00000374490 FAM110CQ1W6H9 321 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms