RNA–Protein interactions for RNA: ENST00000374346.7

PTPN20-204, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 2,481 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-204ENST00000374346 CATSPERGQ6ZRH7 1159 aa11.96□□□□□ -0.5
PTPN20-204ENST00000374346 RFX6Q8HWS3 928 aa11.96□□□□□ -0.5
PTPN20-204ENST00000374346 WDTC1Q8N5D0 677 aa11.96□□□□□ -0.5
PTPN20-204ENST00000374346 CHST13Q8NET6 341 aa11.96□□□□□ -0.5
PTPN20-204ENST00000374346 TCP10LQ8TDR4 215 aa11.96□□□□□ -0.5
PTPN20-204ENST00000374346 SH3TC2Q8TF17 1288 aa11.96□□□□□ -0.5
PTPN20-204ENST00000374346 PRPF31Q8WWY3 499 aaKnown RBP11.96□□□□□ -0.5
PTPN20-204ENST00000374346 DHRS4Q9BTZ2 278 aa11.96□□□□□ -0.5
PTPN20-204ENST00000374346 C2orf40Q9H1Z8 148 aa11.96□□□□□ -0.5
PTPN20-204ENST00000374346 LNPEPQ9UIQ6 1025 aa11.96□□□□□ -0.5
PTPN20-204ENST00000374346 ZMYND8Q9ULU4 1186 aaPredicted RBP11.96□□□□□ -0.5
PTPN20-204ENST00000374346 CLUHO75153 1309 aa11.96□□□□□ -0.5
PTPN20-204ENST00000374346 MSCO60682 206 aa11.95□□□□□ -0.5
PTPN20-204ENST00000374346 ADRA1DP25100 572 aa11.95□□□□□ -0.5
PTPN20-204ENST00000374346 RPL22P35268 128 aaKnown RBP11.95□□□□□ -0.5
PTPN20-204ENST00000374346 EIF3EP60228 445 aaKnown RBP11.95□□□□□ -0.5
PTPN20-204ENST00000374346 BASP1P80723 227 aaKnown RBP11.95□□□□□ -0.5
PTPN20-204ENST00000374346 TARBP2Q15633 366 aaKnown RBP11.95□□□□□ -0.5
PTPN20-204ENST00000374346 BBS9Q3SYG4 887 aa11.95□□□□□ -0.5
PTPN20-204ENST00000374346 FNBP1LQ5T0N5 605 aa11.95□□□□□ -0.5
PTPN20-204ENST00000374346 NBPF12Q5TAG4 269 aaPredicted RBP11.95□□□□□ -0.5
PTPN20-204ENST00000374346 SCARA5Q6ZMJ2 495 aa11.95□□□□□ -0.5
PTPN20-204ENST00000374346 LONP2Q86WA8 852 aa11.95□□□□□ -0.5
PTPN20-204ENST00000374346 ACO2Q99798 780 aaKnown RBP11.95□□□□□ -0.5
PTPN20-204ENST00000374346 TBC1D10AQ9BXI6 508 aa11.95□□□□□ -0.5
PTPN20-204ENST00000374346 RSAD1Q9HA92 442 aa11.95□□□□□ -0.5
PTPN20-204ENST00000374346 CYLDQ9NQC7 956 aa11.95□□□□□ -0.5
PTPN20-204ENST00000374346 HACL1Q9UJ83 578 aa11.95□□□□□ -0.5
PTPN20-204ENST00000374346 LPXNO60711 386 aa11.95□□□□□ -0.5
PTPN20-204ENST00000374346 CCDC22O60826 627 aa11.95□□□□□ -0.5
PTPN20-204ENST00000374346 PRKCBP05771 671 aa11.95□□□□□ -0.5
PTPN20-204ENST00000374346 INHBAP08476 426 aa11.95□□□□□ -0.5
PTPN20-204ENST00000374346 ASPAP45381 313 aa11.95□□□□□ -0.5
PTPN20-204ENST00000374346 GDF10P55107 478 aa11.95□□□□□ -0.5
PTPN20-204ENST00000374346 KCNT1Q5JUK3 1230 aa11.95□□□□□ -0.5
PTPN20-204ENST00000374346 BANPQ8N9N5 519 aa11.95□□□□□ -0.5
PTPN20-204ENST00000374346 ZNF526Q8TF50 670 aaPredicted RBP11.95□□□□□ -0.5
PTPN20-204ENST00000374346 STK32AQ8WU08 396 aa11.95□□□□□ -0.5
PTPN20-204ENST00000374346 TFAP2BQ92481 460 aa11.95□□□□□ -0.5
PTPN20-204ENST00000374346 UTP4Q969X6 686 aaKnown RBP11.95□□□□□ -0.5
PTPN20-204ENST00000374346 FAXDC2Q96IV6 333 aa11.95□□□□□ -0.5
PTPN20-204ENST00000374346 SLC5A4Q9NY91 659 aa11.95□□□□□ -0.5
PTPN20-204ENST00000374346 SAE1Q9UBE0 346 aaPredicted RBP11.95□□□□□ -0.5
PTPN20-204ENST00000374346 ZNF112Q9UJU3 913 aa11.95□□□□□ -0.5
PTPN20-204ENST00000374346 CPSF3Q9UKF6 684 aaKnown RBP11.95□□□□□ -0.5
PTPN20-204ENST00000374346 SSC5DA1L4H1 1573 aa11.94□□□□□ -0.5
PTPN20-204ENST00000374346 LIN7AO14910 233 aaPredicted RBP11.94□□□□□ -0.5
PTPN20-204ENST00000374346 FAM189A1O60320 539 aa11.94□□□□□ -0.5
PTPN20-204ENST00000374346 BANF1O75531 89 aa11.94□□□□□ -0.5
PTPN20-204ENST00000374346 EDN1P05305 212 aa11.94□□□□□ -0.5
PTPN20-204ENST00000374346 SRGAP2CP0DJJ0 459 aa11.94□□□□□ -0.5
PTPN20-204ENST00000374346 MARK3P27448 753 aa11.94□□□□□ -0.5
PTPN20-204ENST00000374346 TAF11Q15544 211 aa11.94□□□□□ -0.5
PTPN20-204ENST00000374346 TAZQ16635 292 aa11.94□□□□□ -0.5
PTPN20-204ENST00000374346 TMEM132AQ24JP5 1023 aa11.94□□□□□ -0.5
PTPN20-204ENST00000374346 PTPN20Q4JDL3 420 aa11.94□□□□□ -0.5
PTPN20-204ENST00000374346 ZNF667Q5HYK9 610 aa11.94□□□□□ -0.5
PTPN20-204ENST00000374346 ANKRD22Q5VYY1 191 aa11.94□□□□□ -0.5
PTPN20-204ENST00000374346 ZNF772Q68DY9 489 aaPredicted RBP11.94□□□□□ -0.5
PTPN20-204ENST00000374346 BZW1Q7L1Q6 419 aaKnown RBP11.94□□□□□ -0.5
PTPN20-204ENST00000374346 CLNKQ7Z7G1 428 aa11.94□□□□□ -0.5
PTPN20-204ENST00000374346 MTDHQ86UE4 582 aaKnown RBP11.94□□□□□ -0.5
PTPN20-204ENST00000374346 TEX9Q8N6V9 391 aa11.94□□□□□ -0.5
PTPN20-204ENST00000374346 FAM13CQ8NE31 585 aa11.94□□□□□ -0.5
PTPN20-204ENST00000374346 NUDCD1Q96RS6 583 aa11.94□□□□□ -0.5
PTPN20-204ENST00000374346 TSSK1BQ9BXA7 367 aa11.94□□□□□ -0.5
PTPN20-204ENST00000374346 ADAM33Q9BZ11 813 aa11.94□□□□□ -0.5
PTPN20-204ENST00000374346 IQCGQ9H095 443 aaKnown RBP11.94□□□□□ -0.5
PTPN20-204ENST00000374346 ASNSD1Q9NWL6 643 aa11.94□□□□□ -0.5
PTPN20-204ENST00000374346 NXF1Q9UBU9 619 aaKnown RBP11.94□□□□□ -0.5
PTPN20-204ENST00000374346 WDR91A4D1P6 747 aa11.94□□□□□ -0.5
PTPN20-204ENST00000374346 B4GALT4O60513 344 aa11.94□□□□□ -0.5
PTPN20-204ENST00000374346 FARP2O94887 1054 aaPredicted RBP11.94□□□□□ -0.5
PTPN20-204ENST00000374346 KRT19P08727 400 aa11.94□□□□□ -0.5
PTPN20-204ENST00000374346 TGFB3P10600 412 aa11.94□□□□□ -0.5
PTPN20-204ENST00000374346 RBP3P10745 1247 aa11.94□□□□□ -0.5
PTPN20-204ENST00000374346 UBA1P22314 1058 aaKnown RBP11.94□□□□□ -0.5
PTPN20-204ENST00000374346 FAM47CQ5HY64 1035 aa11.94□□□□□ -0.5
PTPN20-204ENST00000374346 CDCA2Q69YH5 1023 aaPredicted RBP11.94□□□□□ -0.5
PTPN20-204ENST00000374346 DENND1BQ6P3S1 775 aa11.94□□□□□ -0.5
PTPN20-204ENST00000374346 FAM71DQ8N9W8 422 aa11.94□□□□□ -0.5
PTPN20-204ENST00000374346 RNF149Q8NC42 400 aa11.94□□□□□ -0.5
PTPN20-204ENST00000374346 SPATA18Q8TC71 538 aa11.94□□□□□ -0.5
PTPN20-204ENST00000374346 DCAKDQ8WVC6 231 aa11.94□□□□□ -0.5
PTPN20-204ENST00000374346 SEPT1Q8WYJ6 367 aa11.94□□□□□ -0.5
PTPN20-204ENST00000374346 SLC7A6OSQ96CW6 309 aaPredicted RBP11.94□□□□□ -0.5
PTPN20-204ENST00000374346 ZNF570Q96NI8 536 aa11.94□□□□□ -0.5
PTPN20-204ENST00000374346 CALN1Q9BXU9 219 aa11.94□□□□□ -0.5
PTPN20-204ENST00000374346 FRMD8Q9BZ67 464 aaPredicted RBP11.94□□□□□ -0.5
PTPN20-204ENST00000374346 MIS12Q9H081 205 aa11.94□□□□□ -0.5
PTPN20-204ENST00000374346 MTO1Q9Y2Z2 717 aaKnown RBP11.94□□□□□ -0.5
PTPN20-204ENST00000374346 TGDSO95455 350 aa11.93□□□□□ -0.5
PTPN20-204ENST00000374346 CBX6O95503 412 aa11.93□□□□□ -0.5
PTPN20-204ENST00000374346 T-ENOLP0DO92 83 aa11.93□□□□□ -0.5
PTPN20-204ENST00000374346 KCNA3P22001 575 aa11.93□□□□□ -0.5
PTPN20-204ENST00000374346 ARFIP2P53365 341 aa11.93□□□□□ -0.5
PTPN20-204ENST00000374346 ZNF200P98182 395 aaPredicted RBP11.93□□□□□ -0.5
PTPN20-204ENST00000374346 ROR1Q01973 937 aa11.93□□□□□ -0.5
PTPN20-204ENST00000374346 ZBTB16Q05516 673 aa11.93□□□□□ -0.5
PTPN20-204ENST00000374346 LAMTOR4Q0VGL1 99 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms