RNA–Protein interactions for RNA: ENST00000373589.8

HDAC8-209, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 1,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-209ENST00000373589 CCDC130P13994 396 aa16.53■□□□□ 0.24
HDAC8-209ENST00000373589 PTGIRP43119 386 aa16.53■□□□□ 0.24
HDAC8-209ENST00000373589 AARSP49588 968 aaKnown RBP eCLIP16.53■□□□□ 0.243e-6■■■■■ 61.8
HDAC8-209ENST00000373589 RGS7P49802 495 aa16.53■□□□□ 0.24
HDAC8-209ENST00000373589 CDK7P50613 346 aa16.53■□□□□ 0.24
HDAC8-209ENST00000373589 BCAT1P54687 386 aa16.53■□□□□ 0.24
HDAC8-209ENST00000373589 BST2Q10589 180 aaKnown RBP16.53■□□□□ 0.24
HDAC8-209ENST00000373589 CUL1Q13616 776 aa16.53■□□□□ 0.24
HDAC8-209ENST00000373589 UPP1Q16831 310 aa16.53■□□□□ 0.24
HDAC8-209ENST00000373589 ATP13A4Q4VNC1 1196 aa16.53■□□□□ 0.24
HDAC8-209ENST00000373589 FAM102AQ5T9C2 384 aaPredicted RBP16.53■□□□□ 0.24
HDAC8-209ENST00000373589 POLNQ7Z5Q5 900 aa16.53■□□□□ 0.24
HDAC8-209ENST00000373589 RCOR2Q8IZ40 523 aa16.53■□□□□ 0.24
HDAC8-209ENST00000373589 C3orf58Q8NDZ4 430 aa16.53■□□□□ 0.24
HDAC8-209ENST00000373589 MAIP1Q8WWC4 291 aa16.53■□□□□ 0.24
HDAC8-209ENST00000373589 IFT81Q8WYA0 676 aa16.53■□□□□ 0.24
HDAC8-209ENST00000373589 SEZ6LQ9BYH1 1024 aa16.53■□□□□ 0.24
HDAC8-209ENST00000373589 UBXN6Q9BZV1 441 aa16.53■□□□□ 0.24
HDAC8-209ENST00000373589 VIPAS39Q9H9C1 493 aa16.53■□□□□ 0.24
HDAC8-209ENST00000373589 RGS18Q9NS28 235 aa16.53■□□□□ 0.24
HDAC8-209ENST00000373589 NFU1Q9UMS0 254 aa16.53■□□□□ 0.24
HDAC8-209ENST00000373589 RALAP11233 206 aa16.53■□□□□ 0.24
HDAC8-209ENST00000373589 ECHS1P30084 290 aa16.53■□□□□ 0.24
HDAC8-209ENST00000373589 COILP38432 576 aaPredicted RBP16.53■□□□□ 0.24
HDAC8-209ENST00000373589 FNTAP49354 379 aa16.53■□□□□ 0.24
HDAC8-209ENST00000373589 SLC25A11Q02978 314 aaKnown RBP16.53■□□□□ 0.24
HDAC8-209ENST00000373589 NNTQ13423 1086 aa16.53■□□□□ 0.24
HDAC8-209ENST00000373589 ACAP1Q15027 740 aa16.53■□□□□ 0.24
HDAC8-209ENST00000373589 TXNRD3NBQ6F5E7 133 aa16.53■□□□□ 0.24
HDAC8-209ENST00000373589 OR6B2Q6IFH4 312 aa16.53■□□□□ 0.24
HDAC8-209ENST00000373589 CCDC137Q6PK04 289 aaKnown RBP16.53■□□□□ 0.24
HDAC8-209ENST00000373589 OLFML1Q6UWY5 402 aa16.53■□□□□ 0.24
HDAC8-209ENST00000373589 ANKS1BQ7Z6G8 1248 aa16.53■□□□□ 0.24
HDAC8-209ENST00000373589 RTN4RL1Q86UN2 441 aaPredicted RBP16.53■□□□□ 0.24
HDAC8-209ENST00000373589 KRT222Q8N1A0 295 aa16.53■□□□□ 0.24
HDAC8-209ENST00000373589 TMEM86AQ8N2M4 240 aa16.53■□□□□ 0.24
HDAC8-209ENST00000373589 RNF169Q8NCN4 708 aa16.53■□□□□ 0.24
HDAC8-209ENST00000373589 B3GALNT2Q8NCR0 500 aa16.53■□□□□ 0.24
HDAC8-209ENST00000373589 RBM41Q96IZ5 413 aaKnown RBP16.53■□□□□ 0.24
HDAC8-209ENST00000373589 PIWIL1Q96J94 861 aaKnown RBP16.53■□□□□ 0.24
HDAC8-209ENST00000373589 GDAP1L1Q96MZ0 367 aa16.53■□□□□ 0.24
HDAC8-209ENST00000373589 RUNDC3BQ96NL0 473 aa16.53■□□□□ 0.24
HDAC8-209ENST00000373589 OSBPL8Q9BZF1 889 aa16.53■□□□□ 0.24
HDAC8-209ENST00000373589 UNC93B1Q9H1C4 597 aa16.53■□□□□ 0.24
HDAC8-209ENST00000373589 CYLDQ9NQC7 956 aa16.53■□□□□ 0.24
HDAC8-209ENST00000373589 CASTOR2A6NHX0 329 aa16.52■□□□□ 0.24
HDAC8-209ENST00000373589 C2CD4BA6NLJ0 364 aa16.52■□□□□ 0.24
HDAC8-209ENST00000373589 C9IYK1 514 aa16.52■□□□□ 0.24
HDAC8-209ENST00000373589 ADORA2BP29275 332 aa16.52■□□□□ 0.24
HDAC8-209ENST00000373589 GJC1P36383 396 aa16.52■□□□□ 0.24
HDAC8-209ENST00000373589 TNNT3P45378 269 aaPredicted RBP16.52■□□□□ 0.24
HDAC8-209ENST00000373589 ZNF143P52747 638 aaPredicted RBP16.52■□□□□ 0.24
HDAC8-209ENST00000373589 SNX16P57768 344 aa16.52■□□□□ 0.24
HDAC8-209ENST00000373589 GRIK3Q13003 919 aa16.52■□□□□ 0.24
HDAC8-209ENST00000373589 LLGL1Q15334 1064 aa16.52■□□□□ 0.24
HDAC8-209ENST00000373589 TRNP1Q6NT89 227 aa16.52■□□□□ 0.24
HDAC8-209ENST00000373589 JAMLQ86YT9 394 aa16.52■□□□□ 0.24
HDAC8-209ENST00000373589 ZDHHC17Q8IUH5 632 aa16.52■□□□□ 0.24
HDAC8-209ENST00000373589 CCDC50Q8IVM0 306 aa16.52■□□□□ 0.24
HDAC8-209ENST00000373589 SLC2A14Q8TDB8 520 aa16.52■□□□□ 0.24
HDAC8-209ENST00000373589 SLITRK1Q96PX8 696 aa16.52■□□□□ 0.24
HDAC8-209ENST00000373589 HNRNPABQ99729 332 aaKnown RBP16.52■□□□□ 0.24
HDAC8-209ENST00000373589 PAAF1Q9BRP4 392 aa16.52■□□□□ 0.24
HDAC8-209ENST00000373589 RAB17Q9H0T7 212 aa16.52■□□□□ 0.24
HDAC8-209ENST00000373589 PAK6Q9NQU5 681 aaPredicted RBP16.52■□□□□ 0.24
HDAC8-209ENST00000373589 DDX56Q9NY93 547 aaKnown RBP16.52■□□□□ 0.24
HDAC8-209ENST00000373589 UTP11Q9Y3A2 253 aaKnown RBP16.52■□□□□ 0.24
HDAC8-209ENST00000373589 DNM1LO00429 736 aa16.51■□□□□ 0.23
HDAC8-209ENST00000373589 PIK3R2O00459 728 aa16.51■□□□□ 0.23
HDAC8-209ENST00000373589 PAPSS1O43252 624 aaPredicted RBP16.51■□□□□ 0.23
HDAC8-209ENST00000373589 POMCP01189 267 aa16.51■□□□□ 0.23
HDAC8-209ENST00000373589 PTPN1P18031 435 aaKnown RBP16.51■□□□□ 0.23
HDAC8-209ENST00000373589 TKTP29401 623 aaKnown RBP16.51■□□□□ 0.23
HDAC8-209ENST00000373589 PTPN7P35236 360 aa16.51■□□□□ 0.23
HDAC8-209ENST00000373589 COPS2P61201 443 aa16.51■□□□□ 0.23
HDAC8-209ENST00000373589 SLC6A3Q01959 620 aa16.51■□□□□ 0.23
HDAC8-209ENST00000373589 KIAA0319Q5VV43 1072 aa16.51■□□□□ 0.23
HDAC8-209ENST00000373589 DUPD1Q68J44 220 aa16.51■□□□□ 0.23
HDAC8-209ENST00000373589 SND1Q7KZF4 910 aaKnown RBP eCLIP16.51■□□□□ 0.23
HDAC8-209ENST00000373589 DDX42Q86XP3 938 aaKnown RBP eCLIP16.51■□□□□ 0.23
HDAC8-209ENST00000373589 LINC01599Q8WXQ3 324 aa16.51■□□□□ 0.23
HDAC8-209ENST00000373589 KHSRPQ92945 711 aaKnown RBP eCLIP16.51■□□□□ 0.23
HDAC8-209ENST00000373589 SLCO2A1Q92959 643 aa16.51■□□□□ 0.23
HDAC8-209ENST00000373589 RNF25Q96BH1 459 aaPredicted RBP16.51■□□□□ 0.23
HDAC8-209ENST00000373589 ERP44Q9BS26 406 aa16.51■□□□□ 0.23
HDAC8-209ENST00000373589 TRIM51Q9BSJ1 452 aa16.51■□□□□ 0.23
HDAC8-209ENST00000373589 DAPK3O43293 454 aa16.5■□□□□ 0.23
HDAC8-209ENST00000373589 ATP2C2O75185 946 aa16.5■□□□□ 0.23
HDAC8-209ENST00000373589 EOMESO95936 686 aa16.5■□□□□ 0.23
HDAC8-209ENST00000373589 KRT1P04264 644 aa16.5■□□□□ 0.23
HDAC8-209ENST00000373589 FAM153BP0C7A2 387 aa16.5■□□□□ 0.23
HDAC8-209ENST00000373589 GPD1P21695 349 aa16.5■□□□□ 0.23
HDAC8-209ENST00000373589 IL1R2P27930 398 aa16.5■□□□□ 0.23
HDAC8-209ENST00000373589 PCK1P35558 622 aa16.5■□□□□ 0.23
HDAC8-209ENST00000373589 LHX1P48742 406 aa16.5■□□□□ 0.23
HDAC8-209ENST00000373589 DRG2P55039 364 aaKnown RBP16.5■□□□□ 0.23
HDAC8-209ENST00000373589 FAM189BP81408 668 aa16.5■□□□□ 0.23
HDAC8-209ENST00000373589 TUSC3Q13454 348 aa16.5■□□□□ 0.23
HDAC8-209ENST00000373589 FAM153CQ494X1 144 aa16.5■□□□□ 0.23
HDAC8-209ENST00000373589 MFSD7Q6UXD7 560 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms