RNA–Protein interactions for RNA: ENST00000373560.6

HDAC8-204, Transcript of histone deacetylase 8, humanhuman

TSL 3 BASIC

Gene HDAC8, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-204ENST00000373560 RELNP78509 3460 aa13.32□□□□□ -0.28
HDAC8-204ENST00000373560 PPEF2O14830 753 aa13.32□□□□□ -0.28
HDAC8-204ENST00000373560 CILPO75339 1184 aa13.32□□□□□ -0.28
HDAC8-204ENST00000373560 LYPLA2O95372 231 aa13.32□□□□□ -0.28
HDAC8-204ENST00000373560 CPA1P15085 419 aa13.32□□□□□ -0.28
HDAC8-204ENST00000373560 KIR2DL1P43626 348 aaPredicted RBP13.32□□□□□ -0.28
HDAC8-204ENST00000373560 GUCY2FP51841 1108 aa13.32□□□□□ -0.28
HDAC8-204ENST00000373560 SPAG1Q07617 926 aa13.32□□□□□ -0.28
HDAC8-204ENST00000373560 CCDC173Q0VFZ6 552 aa13.32□□□□□ -0.28
HDAC8-204ENST00000373560 SCRN1Q12765 414 aa13.32□□□□□ -0.28
HDAC8-204ENST00000373560 MGAT5BQ3V5L5 792 aa13.32□□□□□ -0.28
HDAC8-204ENST00000373560 RABEPKQ7Z6M1 372 aa13.32□□□□□ -0.28
HDAC8-204ENST00000373560 NXPE2Q96DL1 559 aa13.32□□□□□ -0.28
HDAC8-204ENST00000373560 FAM20AQ96MK3 541 aa13.32□□□□□ -0.28
HDAC8-204ENST00000373560 CYP2S1Q96SQ9 504 aa13.32□□□□□ -0.28
HDAC8-204ENST00000373560 SLC26A6Q9BXS9 759 aa13.32□□□□□ -0.28
HDAC8-204ENST00000373560 SLC6A17Q9H1V8 727 aa13.32□□□□□ -0.28
HDAC8-204ENST00000373560 ANKEF1Q9NU02 776 aa13.32□□□□□ -0.28
HDAC8-204ENST00000373560 SLC38A7Q9NVC3 462 aa13.32□□□□□ -0.28
HDAC8-204ENST00000373560 CNTN3Q9P232 1028 aa13.32□□□□□ -0.28
HDAC8-204ENST00000373560 PCDHA4Q9UN74 947 aa13.32□□□□□ -0.28
HDAC8-204ENST00000373560 CYP8B1Q9UNU6 501 aa13.32□□□□□ -0.28
HDAC8-204ENST00000373560 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.32□□□□□ -0.28
HDAC8-204ENST00000373560 TP53BP1Q12888 1972 aaPredicted RBP13.31□□□□□ -0.28
HDAC8-204ENST00000373560 RCCD1A6NED2 376 aa13.31□□□□□ -0.28
HDAC8-204ENST00000373560 OR6C75A6NL08 312 aa13.31□□□□□ -0.28
HDAC8-204ENST00000373560 KRT38O76015 456 aa13.31□□□□□ -0.28
HDAC8-204ENST00000373560 C6P13671 934 aa13.31□□□□□ -0.28
HDAC8-204ENST00000373560 RPL9P32969 192 aaKnown RBP13.31□□□□□ -0.28
HDAC8-204ENST00000373560 HSPA4P34932 840 aa13.31□□□□□ -0.28
HDAC8-204ENST00000373560 MRPS21P82921 87 aaKnown RBP13.31□□□□□ -0.28
HDAC8-204ENST00000373560 ZXDBP98169 803 aa13.31□□□□□ -0.28
HDAC8-204ENST00000373560 KDSRQ06136 332 aa13.31□□□□□ -0.28
HDAC8-204ENST00000373560 ZNF268Q14587 947 aaPredicted RBP13.31□□□□□ -0.28
HDAC8-204ENST00000373560 PTPRNQ16849 979 aa13.31□□□□□ -0.28
HDAC8-204ENST00000373560 SEZ6Q53EL9 994 aa13.31□□□□□ -0.28
HDAC8-204ENST00000373560 SDHAF4Q5VUM1 108 aa13.31□□□□□ -0.28
HDAC8-204ENST00000373560 RGL4Q8IZJ4 473 aa13.31□□□□□ -0.28
HDAC8-204ENST00000373560 EXOC4Q96A65 974 aa13.31□□□□□ -0.28
HDAC8-204ENST00000373560 AIFM3Q96NN9 605 aa13.31□□□□□ -0.28
HDAC8-204ENST00000373560 TM7SF3Q9NS93 570 aa13.31□□□□□ -0.28
HDAC8-204ENST00000373560 HCN2Q9UL51 889 aa13.31□□□□□ -0.28
HDAC8-204ENST00000373560 CAPN8A6NHC0 703 aa13.3□□□□□ -0.28
HDAC8-204ENST00000373560 ABLIM1O14639 778 aa13.3□□□□□ -0.28
HDAC8-204ENST00000373560 SCAMP3O14828 347 aaKnown RBP13.3□□□□□ -0.28
HDAC8-204ENST00000373560 TRIM66O15016 1216 aa13.3□□□□□ -0.28
HDAC8-204ENST00000373560 CYP17A1P05093 508 aa13.3□□□□□ -0.28
HDAC8-204ENST00000373560 MARCKSP29966 332 aaPredicted RBP13.3□□□□□ -0.28
HDAC8-204ENST00000373560 AARSP49588 968 aaKnown RBP eCLIP13.3□□□□□ -0.283e-6■■■■■ 61.8
HDAC8-204ENST00000373560 CSRP3P50461 194 aa13.3□□□□□ -0.28
HDAC8-204ENST00000373560 YARSP54577 528 aaKnown RBP13.3□□□□□ -0.28
HDAC8-204ENST00000373560 VEPH1Q14D04 833 aa13.3□□□□□ -0.28
HDAC8-204ENST00000373560 SLC39A12Q504Y0 691 aa13.3□□□□□ -0.28
HDAC8-204ENST00000373560 SWT1Q5T5J6 900 aaKnown RBP13.3□□□□□ -0.28
HDAC8-204ENST00000373560 PRICKLE2Q7Z3G6 844 aa13.3□□□□□ -0.28
HDAC8-204ENST00000373560 METTL3Q86U44 580 aaKnown RBP13.3□□□□□ -0.28
HDAC8-204ENST00000373560 MON1AQ86VX9 555 aa13.3□□□□□ -0.28
HDAC8-204ENST00000373560 SPACA3Q8IXA5 215 aa13.3□□□□□ -0.28
HDAC8-204ENST00000373560 BLIDQ8IZY5 108 aa13.3□□□□□ -0.28
HDAC8-204ENST00000373560 SNIP1Q8TAD8 396 aaKnown RBP13.3□□□□□ -0.28
HDAC8-204ENST00000373560 DEPTORQ8TB45 409 aa13.3□□□□□ -0.28
HDAC8-204ENST00000373560 RHBDD1Q8TEB9 315 aa13.3□□□□□ -0.28
HDAC8-204ENST00000373560 SPIRE2Q8WWL2 714 aa13.3□□□□□ -0.28
HDAC8-204ENST00000373560 YTHDC1Q96MU7 727 aaKnown RBP13.3□□□□□ -0.28
HDAC8-204ENST00000373560 HSD17B14Q9BPX1 270 aa13.3□□□□□ -0.28
HDAC8-204ENST00000373560 CCDC94Q9BW85 323 aaPredicted RBP13.3□□□□□ -0.28
HDAC8-204ENST00000373560 C2orf40Q9H1Z8 148 aa13.3□□□□□ -0.28
HDAC8-204ENST00000373560 GAREM1Q9H706 876 aa13.3□□□□□ -0.28
HDAC8-204ENST00000373560 CPNE5Q9HCH3 593 aa13.3□□□□□ -0.28
HDAC8-204ENST00000373560 GMIPQ9P107 970 aa13.3□□□□□ -0.28
HDAC8-204ENST00000373560 BSNQ9UPA5 3926 aa13.29□□□□□ -0.28
HDAC8-204ENST00000373560 RRP8O43159 456 aaKnown RBP13.29□□□□□ -0.28
HDAC8-204ENST00000373560 NTRK1P04629 796 aa13.29□□□□□ -0.28
HDAC8-204ENST00000373560 HARSP12081 509 aaKnown RBP13.29□□□□□ -0.28
HDAC8-204ENST00000373560 IL12RB1P42701 662 aa13.29□□□□□ -0.28
HDAC8-204ENST00000373560 WASP42768 502 aa13.29□□□□□ -0.28
HDAC8-204ENST00000373560 RCAN1P53805 252 aa13.29□□□□□ -0.28
HDAC8-204ENST00000373560 FAM160A1Q05DH4 1040 aa13.29□□□□□ -0.28
HDAC8-204ENST00000373560 DMP1Q13316 513 aaPredicted RBP13.29□□□□□ -0.28
HDAC8-204ENST00000373560 MYBPC2Q14324 1141 aa13.29□□□□□ -0.28
HDAC8-204ENST00000373560 ZNF568Q3ZCX4 644 aa13.29□□□□□ -0.28
HDAC8-204ENST00000373560 OVOS1Q6IE37 1185 aa13.29□□□□□ -0.28
HDAC8-204ENST00000373560 PPP4R3AQ6IN85 833 aa13.29□□□□□ -0.28
HDAC8-204ENST00000373560 SLC36A4Q6YBV0 504 aa13.29□□□□□ -0.28
HDAC8-204ENST00000373560 DBX2Q6ZNG2 339 aa13.29□□□□□ -0.28
HDAC8-204ENST00000373560 MIB1Q86YT6 1006 aa13.29□□□□□ -0.28
HDAC8-204ENST00000373560 ZCCHC9Q8N567 271 aaKnown RBP13.29□□□□□ -0.28
HDAC8-204ENST00000373560 SH3RF2Q8TEC5 729 aa13.29□□□□□ -0.28
HDAC8-204ENST00000373560 TTC9Q92623 222 aa13.29□□□□□ -0.28
HDAC8-204ENST00000373560 CCDC43Q96MW1 224 aaKnown RBP13.29□□□□□ -0.28
HDAC8-204ENST00000373560 NCOA5Q9HCD5 579 aaKnown RBP13.29□□□□□ -0.28
HDAC8-204ENST00000373560 TRPC7Q9HCX4 862 aa13.29□□□□□ -0.28
HDAC8-204ENST00000373560 PTPRHQ9HD43 1115 aa13.29□□□□□ -0.28
HDAC8-204ENST00000373560 TOPORSQ9NS56 1045 aaPredicted RBP13.29□□□□□ -0.28
HDAC8-204ENST00000373560 TNFSF13BQ9Y275 285 aa13.29□□□□□ -0.28
HDAC8-204ENST00000373560 SLCO1B1Q9Y6L6 691 aa13.29□□□□□ -0.28
HDAC8-204ENST00000373560 BTBD18B2RXH4 712 aa13.28□□□□□ -0.28
HDAC8-204ENST00000373560 E9PAM4 449 aa13.28□□□□□ -0.28
HDAC8-204ENST00000373560 NDUFV2P19404 249 aa13.28□□□□□ -0.28
HDAC8-204ENST00000373560 NAMPTP43490 491 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms