RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 CALCOCO2Q13137 446 aa20.61■□□□□ 0.89
HDAC1-201ENST00000373548 TRIP13Q15645 432 aaPredicted RBP20.61■□□□□ 0.89
HDAC1-201ENST00000373548 SMTNL2Q2TAL5 461 aa20.61■□□□□ 0.89
HDAC1-201ENST00000373548 OR6B2Q6IFH4 312 aa20.61■□□□□ 0.89
HDAC1-201ENST00000373548 TRNP1Q6NT89 227 aa20.61■□□□□ 0.89
HDAC1-201ENST00000373548 PMF1Q6P1K2 205 aa20.61■□□□□ 0.89
HDAC1-201ENST00000373548 PAXIP1Q6ZW49 1069 aaPredicted RBP20.61■□□□□ 0.89
HDAC1-201ENST00000373548 SPC25Q9HBM1 224 aa20.61■□□□□ 0.89
HDAC1-201ENST00000373548 A8MXQ7 604 aa20.6■□□□□ 0.89
HDAC1-201ENST00000373548 M0QZ92 97 aa20.6■□□□□ 0.89
HDAC1-201ENST00000373548 KRT7P08729 469 aa20.6■□□□□ 0.89
HDAC1-201ENST00000373548 RARBP10826 455 aa20.6■□□□□ 0.89
HDAC1-201ENST00000373548 FGFR1P11362 822 aa20.6■□□□□ 0.89
HDAC1-201ENST00000373548 PNPLA4P41247 253 aa20.6■□□□□ 0.89
HDAC1-201ENST00000373548 NKX3-2P78367 333 aa20.6■□□□□ 0.89
HDAC1-201ENST00000373548 HADHQ16836 314 aaKnown RBP20.6■□□□□ 0.89
HDAC1-201ENST00000373548 CYP4F22Q6NT55 531 aa20.6■□□□□ 0.89
HDAC1-201ENST00000373548 SNF8Q96H20 258 aa20.6■□□□□ 0.89
HDAC1-201ENST00000373548 HHIPL1Q96JK4 782 aa20.6■□□□□ 0.89
HDAC1-201ENST00000373548 ATP6V1G3Q96LB4 118 aa20.6■□□□□ 0.89
HDAC1-201ENST00000373548 MIS12Q9H081 205 aa20.6■□□□□ 0.89
HDAC1-201ENST00000373548 PABPC3Q9H361 631 aaKnown RBP20.6■□□□□ 0.89
HDAC1-201ENST00000373548 CASP8AP2Q9UKL3 1982 aa20.6■□□□□ 0.89
HDAC1-201ENST00000373548 PTGESO14684 152 aa20.6■□□□□ 0.89
HDAC1-201ENST00000373548 LIASO43766 372 aa20.6■□□□□ 0.89
HDAC1-201ENST00000373548 ADAMTS4O75173 837 aa20.6■□□□□ 0.89
HDAC1-201ENST00000373548 SETSIPP0DME0 302 aa20.6■□□□□ 0.89
HDAC1-201ENST00000373548 TAF6P49848 677 aa20.6■□□□□ 0.89
HDAC1-201ENST00000373548 CACNB2Q08289 660 aaPredicted RBP20.6■□□□□ 0.89
HDAC1-201ENST00000373548 ACAP1Q15027 740 aa20.6■□□□□ 0.89
HDAC1-201ENST00000373548 FAM47CQ5HY64 1035 aa20.6■□□□□ 0.89
HDAC1-201ENST00000373548 KCNT1Q5JUK3 1230 aa20.6■□□□□ 0.89
HDAC1-201ENST00000373548 ARHGAP17Q68EM7 881 aa20.6■□□□□ 0.89
HDAC1-201ENST00000373548 RHBDF2Q6PJF5 856 aa20.6■□□□□ 0.89
HDAC1-201ENST00000373548 SLC35F5Q8WV83 523 aa20.6■□□□□ 0.89
HDAC1-201ENST00000373548 SLC4A5Q9BY07 1137 aa20.6■□□□□ 0.89
HDAC1-201ENST00000373548 C2CD4BA6NLJ0 364 aa20.59■□□□□ 0.89
HDAC1-201ENST00000373548 MYZAPP0CAP1 466 aa20.59■□□□□ 0.89
HDAC1-201ENST00000373548 ITIH2P19823 946 aa20.59■□□□□ 0.89
HDAC1-201ENST00000373548 MIPP30301 263 aa20.59■□□□□ 0.89
HDAC1-201ENST00000373548 ZNF143P52747 638 aaPredicted RBP20.59■□□□□ 0.89
HDAC1-201ENST00000373548 ZNF618Q5T7W0 954 aa20.59■□□□□ 0.89
HDAC1-201ENST00000373548 LIMS2Q7Z4I7 341 aa20.59■□□□□ 0.89
HDAC1-201ENST00000373548 SERINC5Q86VE9 423 aa20.59■□□□□ 0.89
HDAC1-201ENST00000373548 HESX1Q9UBX0 185 aa20.59■□□□□ 0.89
HDAC1-201ENST00000373548 DNPEPQ9ULA0 475 aa20.59■□□□□ 0.89
HDAC1-201ENST00000373548 ST3GAL5Q9UNP4 418 aa20.59■□□□□ 0.89
HDAC1-201ENST00000373548 GOLGA6L10A6NI86 522 aa20.59■□□□□ 0.89
HDAC1-201ENST00000373548 TMEM88BA6NKF7 163 aa20.59■□□□□ 0.89
HDAC1-201ENST00000373548 RPS6KA5O75582 802 aa20.59■□□□□ 0.89
HDAC1-201ENST00000373548 GABBR2O75899 941 aa20.59■□□□□ 0.89
HDAC1-201ENST00000373548 CHRNA1P02708 482 aa20.59■□□□□ 0.89
HDAC1-201ENST00000373548 PDGFRBP09619 1106 aa20.59■□□□□ 0.89
HDAC1-201ENST00000373548 CTSHP09668 335 aa20.59■□□□□ 0.89
HDAC1-201ENST00000373548 CAPN2P17655 700 aa20.59■□□□□ 0.89
HDAC1-201ENST00000373548 GPD1P21695 349 aa20.59■□□□□ 0.89
HDAC1-201ENST00000373548 LMO2P25791 158 aa20.59■□□□□ 0.89
HDAC1-201ENST00000373548 DRICH1Q6PGQ1 229 aaPredicted RBP20.59■□□□□ 0.89
HDAC1-201ENST00000373548 RSPH3Q86UC2 560 aa20.59■□□□□ 0.89
HDAC1-201ENST00000373548 CRYBG2Q8N1P7 616 aa20.59■□□□□ 0.89
HDAC1-201ENST00000373548 ZFP42Q96MM3 310 aa20.59■□□□□ 0.89
HDAC1-201ENST00000373548 SENP6Q9GZR1 1112 aaPredicted RBP20.59■□□□□ 0.89
HDAC1-201ENST00000373548 SEMA4AQ9H3S1 761 aa20.59■□□□□ 0.89
HDAC1-201ENST00000373548 ASNSD1Q9NWL6 643 aa20.59■□□□□ 0.89
HDAC1-201ENST00000373548 PCSK1NQ9UHG2 260 aa20.59■□□□□ 0.89
HDAC1-201ENST00000373548 MEIS3P2A8K0S8 358 aa20.58■□□□□ 0.89
HDAC1-201ENST00000373548 HMGB1P1B2RPK0 211 aaPredicted RBP20.58■□□□□ 0.89
HDAC1-201ENST00000373548 RNF8O76064 485 aa20.58■□□□□ 0.89
HDAC1-201ENST00000373548 ALDH1A1P00352 501 aa20.58■□□□□ 0.89
HDAC1-201ENST00000373548 ATF2P15336 505 aa20.58■□□□□ 0.89
HDAC1-201ENST00000373548 KDELR1P24390 212 aa20.58■□□□□ 0.89
HDAC1-201ENST00000373548 GNL1P36915 607 aaPredicted RBP20.58■□□□□ 0.89
HDAC1-201ENST00000373548 VPS41P49754 854 aa20.58■□□□□ 0.89
HDAC1-201ENST00000373548 PDE4CQ08493 712 aa20.58■□□□□ 0.89
HDAC1-201ENST00000373548 TAZQ16635 292 aa20.58■□□□□ 0.89
HDAC1-201ENST00000373548 SV2CQ496J9 727 aa20.58■□□□□ 0.89
HDAC1-201ENST00000373548 OLFML1Q6UWY5 402 aa20.58■□□□□ 0.89
HDAC1-201ENST00000373548 TMEM110Q86TL2 294 aa20.58■□□□□ 0.89
HDAC1-201ENST00000373548 RXFP2Q8WXD0 754 aa20.58■□□□□ 0.89
HDAC1-201ENST00000373548 PPP1R10Q96QC0 940 aaKnown RBP20.58■□□□□ 0.89
HDAC1-201ENST00000373548 CNPY3Q9BT09 278 aa20.58■□□□□ 0.89
HDAC1-201ENST00000373548 LRRC4CQ9HCJ2 640 aa20.58■□□□□ 0.89
HDAC1-201ENST00000373548 XPNPEP3Q9NQH7 507 aa20.58■□□□□ 0.89
HDAC1-201ENST00000373548 CENPFP49454 3210 aa20.58■□□□□ 0.88
HDAC1-201ENST00000373548 ERICH4A6NGS2 130 aa20.57■□□□□ 0.88
HDAC1-201ENST00000373548 GRAP2O75791 330 aa20.57■□□□□ 0.88
HDAC1-201ENST00000373548 TRUB2O95900 331 aaKnown RBP20.57■□□□□ 0.88
HDAC1-201ENST00000373548 NUDT17P0C025 328 aa20.57■□□□□ 0.88
HDAC1-201ENST00000373548 CCDC130P13994 396 aa20.57■□□□□ 0.88
HDAC1-201ENST00000373548 KLRC2P26717 231 aa20.57■□□□□ 0.88
HDAC1-201ENST00000373548 ADCY8P40145 1251 aa20.57■□□□□ 0.88
HDAC1-201ENST00000373548 ITGA8P53708 1063 aa20.57■□□□□ 0.88
HDAC1-201ENST00000373548 BYSLQ13895 437 aaKnown RBP20.57■□□□□ 0.88
HDAC1-201ENST00000373548 SLMAPQ14BN4 828 aa20.57■□□□□ 0.88
HDAC1-201ENST00000373548 DNAJC21Q5F1R6 531 aaKnown RBP20.57■□□□□ 0.88
HDAC1-201ENST00000373548 UBAP2Q5T6F2 1119 aaKnown RBP20.57■□□□□ 0.88
HDAC1-201ENST00000373548 SH3PXD2AQ5TCZ1 1133 aa20.57■□□□□ 0.88
HDAC1-201ENST00000373548 ZNF365Q70YC5 407 aa20.57■□□□□ 0.88
HDAC1-201ENST00000373548 APPL2Q8NEU8 664 aa20.57■□□□□ 0.88
HDAC1-201ENST00000373548 AAASQ9NRG9 546 aa20.57■□□□□ 0.88
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