RNA–Protein interactions for RNA: ENST00000372917.8

TRERF1-203, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 3,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-203ENST00000372917 CENPBD1B2RD01 187 aa11.12□□□□□ -0.63
TRERF1-203ENST00000372917 POC1B-GALNT4F8VUJ3 575 aa11.12□□□□□ -0.63
TRERF1-203ENST00000372917 THAP12O43422 761 aa11.12□□□□□ -0.63
TRERF1-203ENST00000372917 AP1G1O43747 822 aa11.12□□□□□ -0.63
TRERF1-203ENST00000372917 B4GALT4O60513 344 aa11.12□□□□□ -0.63
TRERF1-203ENST00000372917 CCNT1O60563 726 aaKnown RBP11.12□□□□□ -0.63
TRERF1-203ENST00000372917 UFL1O94874 794 aa11.12□□□□□ -0.63
TRERF1-203ENST00000372917 PRKCAP17252 672 aa11.12□□□□□ -0.63
TRERF1-203ENST00000372917 LONP1P36776 959 aaKnown RBP11.12□□□□□ -0.63
TRERF1-203ENST00000372917 HNRNPFP52597 415 aaKnown RBP11.12□□□□□ -0.63
TRERF1-203ENST00000372917 P2RX3P56373 397 aa11.12□□□□□ -0.63
TRERF1-203ENST00000372917 BNIP3Q12983 259 aa11.12□□□□□ -0.63
TRERF1-203ENST00000372917 GNA13Q14344 377 aa11.12□□□□□ -0.63
TRERF1-203ENST00000372917 RRP1BQ14684 758 aaKnown RBP11.12□□□□□ -0.63
TRERF1-203ENST00000372917 PGS1Q32NB8 556 aa11.12□□□□□ -0.63
TRERF1-203ENST00000372917 CAVIN4Q5BKX8 364 aa11.12□□□□□ -0.63
TRERF1-203ENST00000372917 TNFAIP8L3Q5GJ75 292 aa11.12□□□□□ -0.63
TRERF1-203ENST00000372917 FIGNQ5HY92 759 aa11.12□□□□□ -0.63
TRERF1-203ENST00000372917 PPM1LQ5SGD2 360 aa11.12□□□□□ -0.63
TRERF1-203ENST00000372917 BTBD8Q5XKL5 378 aa11.12□□□□□ -0.63
TRERF1-203ENST00000372917 DHRS4L2Q6PKH6 230 aa11.12□□□□□ -0.63
TRERF1-203ENST00000372917 CCDC84Q86UT8 332 aaPredicted RBP11.12□□□□□ -0.63
TRERF1-203ENST00000372917 SLC51BQ86UW2 128 aa11.12□□□□□ -0.63
TRERF1-203ENST00000372917 PLPP6Q8IY26 295 aa11.12□□□□□ -0.63
TRERF1-203ENST00000372917 FBXO27Q8NI29 283 aa11.12□□□□□ -0.63
TRERF1-203ENST00000372917 CITED4Q96RK1 184 aa11.12□□□□□ -0.63
TRERF1-203ENST00000372917 OLFM1Q99784 485 aa11.12□□□□□ -0.63
TRERF1-203ENST00000372917 RUBCNLQ9H714 662 aa11.12□□□□□ -0.63
TRERF1-203ENST00000372917 LY9Q9HBG7 655 aa11.12□□□□□ -0.63
TRERF1-203ENST00000372917 IGSF9Q9P2J2 1179 aa11.12□□□□□ -0.63
TRERF1-203ENST00000372917 ANKFY1Q9P2R3 1169 aa11.12□□□□□ -0.63
TRERF1-203ENST00000372917 PARP2Q9UGN5 583 aa11.12□□□□□ -0.63
TRERF1-203ENST00000372917 GNPTGQ9UJJ9 305 aa11.12□□□□□ -0.63
TRERF1-203ENST00000372917 FLT1P17948 1338 aa11.12□□□□□ -0.63
TRERF1-203ENST00000372917 A0A1B0GTW7 788 aa11.11□□□□□ -0.63
TRERF1-203ENST00000372917 SSU72P8A0A1W2PR75 194 aa11.11□□□□□ -0.63
TRERF1-203ENST00000372917 ILVBLA1L0T0 632 aa11.11□□□□□ -0.63
TRERF1-203ENST00000372917 PRKAB2O43741 272 aa11.11□□□□□ -0.63
TRERF1-203ENST00000372917 BMP10O95393 424 aa11.11□□□□□ -0.63
TRERF1-203ENST00000372917 RARBP10826 455 aa11.11□□□□□ -0.63
TRERF1-203ENST00000372917 PCNAP12004 261 aa11.11□□□□□ -0.63
TRERF1-203ENST00000372917 KRT15P19012 456 aa11.11□□□□□ -0.63
TRERF1-203ENST00000372917 GUCY1A2P33402 732 aa11.11□□□□□ -0.63
TRERF1-203ENST00000372917 ADD2P35612 726 aa11.11□□□□□ -0.63
TRERF1-203ENST00000372917 GNG2P59768 71 aa11.11□□□□□ -0.63
TRERF1-203ENST00000372917 ESRRGP62508 458 aa11.11□□□□□ -0.63
TRERF1-203ENST00000372917 KCNA1Q09470 495 aa11.11□□□□□ -0.63
TRERF1-203ENST00000372917 TRIP13Q15645 432 aaPredicted RBP11.11□□□□□ -0.63
TRERF1-203ENST00000372917 RWDD4Q6NW29 188 aaKnown RBP11.11□□□□□ -0.63
TRERF1-203ENST00000372917 IFNL3Q8IZI9 196 aa11.11□□□□□ -0.63
TRERF1-203ENST00000372917 C4orf33Q8N1A6 199 aa11.11□□□□□ -0.63
TRERF1-203ENST00000372917 RBM15BQ8NDT2 890 aaKnown RBP11.11□□□□□ -0.63
TRERF1-203ENST00000372917 PLK2Q9NYY3 685 aa11.11□□□□□ -0.63
TRERF1-203ENST00000372917 DNAJB4Q9UDY4 337 aa11.11□□□□□ -0.63
TRERF1-203ENST00000372917 PCDH11YQ9BZA8 1340 aa11.11□□□□□ -0.63
TRERF1-203ENST00000372917 PXDNQ92626 1479 aa11.11□□□□□ -0.63
TRERF1-203ENST00000372917 CES2O00748 559 aa11.11□□□□□ -0.63
TRERF1-203ENST00000372917 ARHGEF15O94989 841 aa11.11□□□□□ -0.63
TRERF1-203ENST00000372917 RAG1P15918 1043 aa11.11□□□□□ -0.63
TRERF1-203ENST00000372917 CXCR2P25025 360 aa11.11□□□□□ -0.63
TRERF1-203ENST00000372917 PTK2BQ14289 1009 aa11.11□□□□□ -0.63
TRERF1-203ENST00000372917 TRIM71Q2Q1W2 868 aaKnown RBP11.11□□□□□ -0.63
TRERF1-203ENST00000372917 HERC4Q5GLZ8 1057 aaPredicted RBP11.11□□□□□ -0.63
TRERF1-203ENST00000372917 DGLUCYQ7Z3D6 616 aa11.11□□□□□ -0.63
TRERF1-203ENST00000372917 HEATR3Q7Z4Q2 680 aa11.11□□□□□ -0.63
TRERF1-203ENST00000372917 TMPRSS6Q8IU80 811 aa11.11□□□□□ -0.63
TRERF1-203ENST00000372917 LSMEM2Q8N112 164 aa11.11□□□□□ -0.63
TRERF1-203ENST00000372917 PPM1KQ8N3J5 372 aa11.11□□□□□ -0.63
TRERF1-203ENST00000372917 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.11□□□□□ -0.63
TRERF1-203ENST00000372917 C18orf8Q96DM3 657 aa11.11□□□□□ -0.63
TRERF1-203ENST00000372917 FBXL18Q96ME1 805 aa11.11□□□□□ -0.63
TRERF1-203ENST00000372917 ALG13Q9NP73 1137 aaKnown RBP11.11□□□□□ -0.63
TRERF1-203ENST00000372917 STMN3Q9NZ72 180 aa11.11□□□□□ -0.63
TRERF1-203ENST00000372917 NAALADL1Q9UQQ1 740 aa11.11□□□□□ -0.63
TRERF1-203ENST00000372917 BHMG1C9JSJ3 638 aaPredicted RBP11.11□□□□□ -0.63
TRERF1-203ENST00000372917 POLR2MP0CAP2 368 aa11.11□□□□□ -0.63
TRERF1-203ENST00000372917 ARHGAP4P98171 946 aa11.11□□□□□ -0.63
TRERF1-203ENST00000372917 OTUD4Q01804 1114 aaKnown RBP11.11□□□□□ -0.63
TRERF1-203ENST00000372917 UBE3CQ15386 1083 aa11.11□□□□□ -0.63
TRERF1-203ENST00000372917 PLEKHG4Q58EX7 1191 aa11.11□□□□□ -0.63
TRERF1-203ENST00000372917 TTC38Q5R3I4 469 aa11.11□□□□□ -0.63
TRERF1-203ENST00000372917 ZNF618Q5T7W0 954 aa11.11□□□□□ -0.63
TRERF1-203ENST00000372917 ZNF598Q86UK7 904 aaKnown RBP11.11□□□□□ -0.63
TRERF1-203ENST00000372917 ZNF654Q8IZM8 581 aa11.11□□□□□ -0.63
TRERF1-203ENST00000372917 LILRB2Q8N423 598 aa11.11□□□□□ -0.63
TRERF1-203ENST00000372917 MARVELD2Q8N4S9 558 aa11.11□□□□□ -0.63
TRERF1-203ENST00000372917 MARCH10Q8NA82 808 aaPredicted RBP11.11□□□□□ -0.63
TRERF1-203ENST00000372917 RMDN1Q96DB5 314 aa11.11□□□□□ -0.63
TRERF1-203ENST00000372917 BTBD9Q96Q07 612 aa11.11□□□□□ -0.63
TRERF1-203ENST00000372917 RIOK1Q9BRS2 568 aaKnown RBP11.11□□□□□ -0.63
TRERF1-203ENST00000372917 ZNF717Q9BY31 904 aaPredicted RBP11.11□□□□□ -0.63
TRERF1-203ENST00000372917 ATP13A3Q9H7F0 1226 aa11.11□□□□□ -0.63
TRERF1-203ENST00000372917 SEPT11Q9NVA2 429 aaKnown RBP11.11□□□□□ -0.63
TRERF1-203ENST00000372917 ABI2Q9NYB9 513 aaPredicted RBP11.11□□□□□ -0.63
TRERF1-203ENST00000372917 FAM187AA6NFU0 413 aa11.1□□□□□ -0.63
TRERF1-203ENST00000372917 G3V3G9 751 aa11.1□□□□□ -0.63
TRERF1-203ENST00000372917 TOM1O60784 492 aa11.1□□□□□ -0.63
TRERF1-203ENST00000372917 SERPING1P05155 500 aa11.1□□□□□ -0.63
TRERF1-203ENST00000372917 CTRB1P17538 263 aa11.1□□□□□ -0.63
TRERF1-203ENST00000372917 GRK2P25098 689 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms